蛋白质序列混沌特性的研究

为了研究蛋白质序列的特性,首先采用非线性预测方法,得到蛋白质序列的总体误差平均值图。并通过与随机序列,混沌序列的总体误差平均值图相比较,发现蛋白质序列有别于随机序列,和混沌序列很相似,则猜测蛋白质序列具有混沌特性。为了验证该猜测,将蛋白质序列通过混沌随机游走描述方法转化为时间序列,并计算其最大Lyapunov指数。在选取的时间延迟和嵌入维数下,每类蛋白质序列的最大Lyapunov指数都大于零,从而得出蛋白质序列具有混沌特性的结论。     

基于混沌理论的蛋白质序列特性的研究

蛋白质序列特性的研究对于蛋白质的结构及功能具有重要意义。该文为了研究蛋白质序列是否具有混沌行为,先将蛋白质序列通过氨基酸电子离子相互作用势(electron interaction potential,EIIP)转化为时间序列,再根据混沌理论对其进行相空间重构,利用去偏自相关系数,经典G-P算法确定系统的时间延迟t和嵌入维数m,系统的最大Lyapunov指数则用改进的最大Lyapunov指数计算方法计算,其结果绝大多数为正,从而确认了蛋白质时间序列的混沌行为,并对特例进行了说明。     

脑干内的混沌

对脑干听觉诱发电位进行了非线性动力学分析,计算了关联维数Ｄ２和最大Ｌｙａｐｕｎｏｖ特征指数,确认ＢＡＥＰ是一个来源于低维混沌动力系统的时间序列,从而证明人类脑干存在着混沌现象,利用满足最小互信息标准的最佳延迟重构了二维混沌吸引子。     

一种自优化RBF神经网络的叶绿素a浓度时序预测模型

藻类水华发生过程具有复杂性、非线性、时变性等特点,其准确预测一直是一个国际性难题.以天津市于桥水库为研究对象,根据2000年1月至2003年12月常规监测的水生生态数据(采样周期为10 d),提出了一种结合时序方法的可自优化RBF神经网络智能预测模型,对判断藻类水华的重要指标叶绿素a浓度进行预测.研究了训练样本量及RBF神经网络扩展速度SPREAD值的可自优化性能,以及该模型用于于桥水库叶绿素a浓度的短期变化趋势预测的可行性.结果表明,预测性能指标随SPREAD值及样本量不同发生变化,该预测模型能自动寻到最优SPREAD值,并发现至少需要约两年的训练样本量才能达到较好预测效果.当样本量为105,SPREAD值为10时,预测效果最好,精度较高,预测值与实测值的相关系数R达到0.982.该方法对水库的藻类水华预警有一定的参考价值.     

EEG动力学模型中混沌现象的研究

通过对脑电图（electroencephalogram,EEG）动力学模型模拟出的EEG信号的相图、分岔图、功率谱、关联维数和Lyapunov指数的对比研究,得出如下结论：1）该模型是按周期行为与混沌现象交替出现的间歇突发通向混沌的,且该间歇性与Hopf分岔、倍周期分岔和逆分岔有关;2）支持了EEG中存在混沌运动的观点。     

香溪河河流连续统特征研究

以香溪河附石藻类密度、藻类叶绿素a浓度、Shannon-Wiener多样性指数及生态系统初级生产力随河流级别的变化为例探索该河流的连续统特征。结果表明,附石藻类密度、藻类叶绿素a浓度和Shannon-Wiener多样性指数总体上都有随着河流级别增加而增加的趋势,但在1～3级河段之间这种趋势并不明显,甚至出现了逆转。河流初级生产力也有随河流级别增加而增加的趋势,并在第4级河流达到最大,随后有所下降。在全水系范围内河流初级生产力(P)与群落呼吸(R)比值P／R均大于1,说明香溪河是一条以自养生产为主的河流。所研究的特征并不完全与连续统概念的预测相一致,表明河流已经受到了一定程度的人为干扰。     

三峡库区古夫河着生藻类叶绿素a的时空分布特征及其影响因素

古夫河系长江三峡水库湖北省境内香溪河的一条支流,发源于神农架林区并最终汇入三峡水库香溪河库湾,是流域生态学研究的热点水体。本文对古夫河2010年9月至2011年8月干流及主要支流21个样点的着生藻类叶绿素a和14项环境因子进行了调查,采用多元统计方法对调查数据进行了方差分析、聚类分析、偏相关分析和逐步回归分析,研究了着生藻类叶绿素a的时空分布特征及其主要环境影响因子。结果表明：叶绿素a含量范围为0.07—145.96 mg/m2,平均值为11.63 mg/m2。不同样点的叶绿素a含量差异显著,其中古夫河干流上游低于下游,支流竹园河上游高于下游,表现为人为影响大的区域高于人为影响小的区域;不同季节着生藻类叶绿素a含量差异显著,表现出冬春季高、夏秋季低的趋势。古夫河着生藻类叶绿素a与总磷和硬度呈极显著正相关,与电导率、氨氮和总氮呈显著正相关,而与流速呈极显著负相关;水体总磷是古夫河流域着生藻类生长的第一限制因子,流速对着生藻类的生长具有显著抑制作用;古夫河着生藻类生物量空间格局可能由其生境尺度（营养盐）和流域尺度（硬度和电导率）的特征决定,而古夫河着生藻类生物量时间变化主要受水动力（流速）的影响。     

肌电信号的相空间分析

为了研究肌电信号的复杂性及其动力学特征,本文通过对肌电信号的相空间分析,计算并分析重构相空间中的肌电信号的关联维及最大李雅谱诺夫指数随嵌入维增加而发生变化的情况,发现其关联维不像噪声那样随着嵌入维的增大而增大,而是趋于一稳定值,此外它还具有正的李雅谱诺夫指数,为进一步对肌电信号进行混沌分析打下基础。     

香溪河库湾春季水华期间可溶性碳动力学研究

2005年2月23日—4月28日,对三峡水库香溪河库湾内一样点进行每天采样,监测水体中叶绿素a与可溶性碳(DOC)浓度的变化,研究在春季水华暴发期间DOC的动力学特性。监测结果表明,随着时间的推移,叶绿素a有逐渐升高的趋势。其间共暴发了两次水华,其中第一次历时较短,第二次历时较长。DOC的变化趋势与叶绿素a基本吻合。整个暴发过程中的叶绿素a与DOC的回归分析表明,二者具有较好的相关性(R2=0.62),但第一次暴发过程中的相关性很高(R2=0.72),而第二次暴发过程中的相关性较低(R2=0.30)。根据天然水体中DOC来源的主要途径,推测在第一次暴发过程中DOC的来源主要是水体中藻类的光合作用的代谢产物,而第二次暴发过程中DOC的来源主要是水体中藻类死亡腐烂而产生的有机物质。     

鄱阳湖水环境要素与叶绿素—a的灰关联模型｛GM（1，n）｝

运用灰色系统理论对淡水湖泊鄱阳湖中叶绿素 -ａ与理化因子的关系进行研究 ,用灰关联理论研究理化因子对叶绿素 -ａ数量变动影响的排列顺序 ,确定有效因子 ;利用有效因子进一步采用灰色模型[1 ,2 ] 对叶绿素 -ａ数量变动进行建模研究。1　材料与方法1 .1　样品的采集与分析方法　所有数据如表 1所示。采样地理位置、采样时间、采样方式和数据的分析方法见参考文献 [3]。1 .2　灰关联分析　以叶绿素 -ａ(Ｃｈｌ. -ａ ,ｍｇ .ｍ- 3)为母序列 {ＸＯ(ｔ) },以湖水的温度Ｔ、水位、蒸发量、总磷ＴＰ、总氮ＴＮ、氨盐ＮＨ4-Ｎ、亚硝酸盐ＮＯ2 -Ｎ…     

六种藓类植物茎的比较解剖学研究

通过对6种藓类植物,即褶叶青藓(Brachythecium salebrosum(Web.et Mohr.)B.S.G.)、湿地匐灯藓(Plagiomnium acutum(Lindb.)Kop.)、侧枝匐灯藓(Plagiomnium maximoviczii(Lindb.)Kop.)、大凤尾藓(Fissidensnobilis Griff.)、大羽藓(Thuidium cymbifolium(Doz.et Molk.)B.S.G.)和大灰藓(Hypnum plumaeforme Wils.)嫩茎和老茎的石蜡切片和显微观察发现,同一藓类植株的嫩茎和老茎,茎结构稳定,不同种藓类植物茎横切面具有不同特征.植物体茎横切面形状、表层细胞的层数、细胞大小和细胞壁厚薄、皮层细胞大小和形状、中轴的有无以及比例等特征可以作为藓类植物的分科分类依据之一.     

Photoregulation of seed germination of wild-type and of an aurea-mutant of tomato

Seed germination of an aurea mutant of tomato ( Lycopersicon esculentum Mill.) is promoted by continuous irradiation with red, far-red or long-wavelength far-red (758 nm) light as well as by cyclic irradiations (5 min red or 5 min far-red/25 min darkness). Far-red light applied immediately after each red does not change the germination behaviour. Seed germination of the isogenic wild-type, cv. UC-105, is promoted by continuous and cyclic red light while it is inhibited by continuous and cyclic far-red light and by continious 758 nm irradiation. Far-red irradiation reverses almost completely the promoting effect of red light. The promoting effect (in the aurea mutant) and the inhibitory effect (in the wild-type) of continuous far-red light do not show photon fluence rate dependency above 20 nmol m⁻² s⁻¹. It is concluded that phytochrome controls tomato seed germination throgh low energy responses in both the wild type and the au mutant. The promoting effect of continuous and cyclic far-red light in the au mutant can be attributed to a greater sensitivity to P_fr.     

Cause of Senescence of Nine Sorts of Flowers

The levels of endogenous phytohormones and respiratory rate in nine sorts of flowers such as Cymbidium faberi Rolfe, Nopalxochia ackermannii Kunth and others were investigated both at full bloom and senescence and meanwhile the effect of exogenous phytohormones on prolonging the blossoms and promoting ethylene production were tested. There is a high content of endogenous ethylene in all the long-lived flowere, about 3–16 folds higer than the short-lived ones. There is a high level of ABA at full blooming flowers of short-lived flowers, in which there is no or only some cytokinins in it, but the ratio of CTK (6BA+zeatin)/ABA is smaller(l.7). The endogenous ABA reached a much higher level at senescence in all nine sorts of flowers, so it is reasonable to consider that it is ABA which plays an important role of regulation in controlling flower's senescence. There is a much higher level of GA3 and zeatin in the long-lived flowers which is not demonstrated in the shortlived ones. The respiratory rate is one of the factors controtling the longevity of flowers, but it does not play a decided role. Application of 6BA and zeatin prolongs distinctly orchid’s longevity, however exogenous IAA through the promotive action on ethylene production, evidently extends the longevity of the flowers of the Nopalxochia ackermannii Kunth.     

Interconnection of parameters of regulation system of lipid peroxidation and of morphophysiological parameters of mouse liver

A complex analysis of seasonal fluctuations of the mean group parameters of the system of regulation of lipid peroxidation has been performed in liver of Balb/c mice. Association of lipid characteristics and morphophysiological parameters is studied in the Balb/c mouse liver. An inter-connection is revealed between the liver index and the amount of lysoforms of phospholipids, the scale and character of the interconnection differing essentially depending on proportion of phos-phatidylcholine in mouse liver phospholipids.     

龙胆科药用植物化学成分的研究现状

龙胆科植物在我国的分布范围很广,且多数为药用植物,其多数种属的药用植物,至今其化学成分尚未被系统研究。综述了目前龙胆科药用植物的化学成分的研究现状及一般提取方法,对近年来发现的环烯醚萜及裂环烯醚萜类化合物进行了总结,为本科药用植物的更深入研究提供了参考。     

Physiological characteristics of various species of strains of carboxydobacteria

Seven strains of aerobic carbon monoxide-oxidizing bacteria (carboxydebacteria) when growing on CO as sole source of carbon and energy had doubling times which ranged from 12–42 h. The activity profiles obtained after discontinuous sucrose density gradient centrifugation indicated that the CO-oxidizing enzymes are soluble and the hydrogenases are membrane-bound in all strains examined. The CO-oxidizing enzymes of Pseudomonas carboxydohydrogena, Pseudomonas carboxydoflava, Comamonas compransoris, and the so far unidentified strains OM2, OM3, and OM4 had a molecular weight of 230,000; that of Achromobacter carboxydus amounted to 170,000. The molecular weights of the CO-oxidizing and H₂-oxidizing enzymes turned out to be identical. The cell sonicates were shown to catalyze the oxidation of both CO and H₂ with methylene blue, thionine, phenazine methosulfate, toluylene blue, dichlorophenolindophenol, cytochrome c or ferricyanide as electron acceptors. Methyl viologen, benzyl viologen, FAD⁺, FMN⁺, and NAD(P)⁺ were not reduced. The spectrum of electron acceptors was identical for all strains tested. Neither free formate, hydrogen nor oxygen gas were involved in the CO-oxidation reaction. Methylene blue was reduced by CO at a 1:1 molar ratio. The results indicate that CO-oxidation by carboxydobacteria is catalyzed by identical or similar enzymes and that the reaction obeys the equation CO+H₂OCO₂+2H⁺+2e^- as previously shown for Pseudomonas carboxydovorans.Dedicated to Otto Kandler remembering almost three decades of enjoyable cooperation     

Modulation of allostery of pyruvate kinase by shifting of an ensemble of microstates

Since the introduction of the concepts of allostery about four decades ago, much advancement has been made in elucidating the structure-function correlation in allostery. However, there are still a number of issues that remain unresolved. In this review we used mammalian pyruvate kinase (PK) as a model system to understand the role of protein dynamics in modulating cooperativity. PK has a triosephosphate isomerase (TIM)(α/β)₈ barrel structural motif. PK is an ideal system to address basic questions regarding regulatory mechanisms about this common (α/β)₈ structural motif. The simplest model accounting for all of the solution thermodynamic and kinetic data on ligand-enzyme interactions involves two conformational states, inactive E^T and active E^R. These conformational states are represented by domain movements. Further studies provide the first evidence for a differential effect of ligand binding on the dynamics of the structural elements, not major secondary structural changes. These data are consistent with our model that allosteric regulation of PK is the consequence of perturbation of the distribution of an ensemble of states in which the inactive E^T and active E^R represent the two extreme end states. Sequence differences and ligands can modulate the distribution of states leading to alterations of functions. The future work includes: defining the network of functionally connected residues; elucidating the chemical principles governing the sequence differences which affect functions; and probing the nature of mutations on the stability of the secondary structural elements, which in turn modulate allostery.     

（鱼句）亚科花（鱼骨）型鱼类骨骼系统的比较

对我国花型Hemibarbuspattern鱼类作了骨骼系统比较,结果表明,此类型鱼类脑颅较长,副蝶骨平直或稍弯曲,眶蝶骨腹纵嵴发达(铜鱼Coreius septentrionalis例外),下颞窝和咽突中等大,基枕骨后突发达;脑颅中的上筛骨的后突、侧筛骨的外筛突,蝶耳骨的外突、上耳骨的后突、围眶骨和后颞窝等均有明显的差异;咽颅中的舌颌骨、尾舌骨、鳃盖骨和下咽齿的列数等又有显著的区别;附肢骨骼中的腰带骨、脊椎骨中的复合神经骨和第4椎骨腹侧的悬器等也有不同之处。据此,这些差异和区别可作为属间或种间的分类依据。