一株丁二酸产生菌的选育及代谢分析

[目的]了解细胞代谢过程,并最终选育出高产突变株,对丁二酸的工业生物转化有重要意义.[方法]在菌株生化及分子鉴定基础上,讨论了菌株的代谢途径,便于实施有针对性的诱变选育,利用矩阵计算了流量分布以及用扰动法分析了代谢节点.[结果]菌株S.JST经鉴定为产丁二酸放线杆菌,酶活检测表明磷酸烯醇式丙酮酸羧激酶、苹果酸脱氢酶在丁二酸代谢过程中具有较高酶活,出发株的流量分布显示副产物乙醇的流量仅次于丁二酸的流量,选育获得的突变株乙醇脱氧酶酶活显著降低,丁二酸与乙醇的流量分别有34%升高与93%的降低,序列分析发现突变株的乙醇脱氢酶酶基因中存在一个突变位点,且生物信息学表明该位点编码的氨基酸序列与该酶的NADH连接活性有联系.[结论]对产丁二酸放线杆菌采用定向选育的方法能够有效改善细胞代谢,并最终提高丁二酸产量.     

外源添加代谢中间体对产琥珀酸放线杆菌厌氧发酵制备丁二酸的影响

考察了外源添加中间代谢产物对菌体生长及发酵产酸的影响,结果表明添加0.5g/L磷酸烯醇式丙酮酸(PEP)时丁二酸产量最高。围绕产琥珀酸放线杆菌NJ113厌氧发酵产丁二酸的代谢网络进行代谢通量分析,发现添加PEP后己糖磷酸途径(HMP)与糖酵解途径(EMP)的通量比由39.4∶60.3提高至76.8∶22.6,解决了丁二酸合成过程中还原力不足的矛盾,导致PEP生成草酰乙酸的通量提高了23.8%,丁二酸代谢通量从99.8mmol/(gDCW·h)增至124.4mmol/(gDCW·h),而副产物乙酸及甲酸的代谢通量分别降低了22.9%、15.4%;关键酶活分析结果表明,添加0.5g/LPEP后PEP羧化激酶比酶活达到1910U/mg,与对照相比提高了74.7%,而丙酮酸激酶的比酶活降低了67.5%。最终丁二酸浓度为29.1g/L,收率达到76.2%,比未添加PEP时提高了11.0%。     

超高静压在琥珀酸生产菌株选育中的应用

采用超高静压对一株产琥珀酸放线杆菌A3进行诱变育种,进一步提高其生产性能.考察了压力、变压速度、生长期对菌株致死率的影响.在压力为200 MPa,50 MPa/min变压速度的诱变条件下对稳定期菌株进行诱变,筛选到一株突变菌株产琥珀酸放线杆菌B19,琥珀酸产量达到32.2 g/L,比出发菌株A3提高了17.9%,代谢副产物乙酸的产量降低了11.5%,经过6次传代表明突变菌株具有稳定的遗传特性.     

Throughput screening of a high succinic acid-producing strain

以琥珀酸放线杆菌Actinobacillus succinogenes F3-21为出发菌株,分别用吖啶黄、紫外线、紫外线-硫酸二乙酯和亚硝基胍进行诱变,产生突变菌库.用“96孔板培养-HPLC浓缩检测.厌氧瓶复筛”的模式筛选高产突变株.从1056株突变株中,筛选到一株高产菌株Ⅵ-10-C.连续传代10次,产酸水平不变.在5L发酵罐中补料分批发酵72 h,Ⅵ-10-C产琥珀酸87.6 g/L,生产强度1.22 g/(L·h),糖酸转化率0.66 g/g;琥珀酸产量比出发菌提高了30％.代谢通量与关键酶活性分析表明:相比于F3-21,Ⅵ-10-C发酵过程中从磷酸烯醇式丙酮酸节点处流向草酰乙酸的代谢流量增加了28.9％,相对应的磷酸烯醇式丙酮酸羧化激酶(PEPCK)酶活提高了23.5％.结果表明用“96孔板培养-HPLC浓缩检测-厌氧瓶复筛”的模式能快速有效筛选高产琥珀酸菌株.     

超高静压在琥珀酸生产菌株选育中的应用

采用超高静压对一株产琥珀酸放线杆菌A3进行诱变育种, 进一步提高其生产性能。考察了压力、变压速度、生长期对菌株致死率的影响。在压力为200 MPa, 50 MPa/min变压速度的诱变条件下对稳定期菌株进行诱变, 筛选到一株突变菌株产琥珀酸放线杆菌B19, 琥珀酸产量达到 32.2 g/L, 比出发菌株A3提高了17.9%, 代谢副产物乙酸的产量降低了11.5%, 经过6次传代表明突变菌株具有稳定的遗传特性。     

高产琥珀酸菌株的通量筛选

以琥珀酸放线杆菌Actinobacillus succinogenes F3—21为出发菌株,分别用吖啶黄、紫外线、紫外线．硫酸二乙酯和亚硝基胍进行诱变,产生突变菌库。用“96孔板培养－HPLC浓缩检测－厌氧瓶复筛”的模式筛选高产突变株。从1056株突变株中,筛选到一株高产菌株Ⅵ-10-C。连续传代10次,产酸水平不变。在5L发酵罐中补料分批发酵72h,Ⅵ－10－C产琥珀酸87．6g／L,生产强度1．22g/（L·h）,糖酸转化率0．66g／g;琥珀酸产量比出发菌提高了30％。代谢通量与关键酶活性分析表明：相比于F3-21,Ⅵ-10-C发酵过程中从磷酸烯醇式丙酮酸节点处流向草酰乙酸的代谢流量增加了28．9％,相对应的磷酸烯醇式丙酮酸羧化激酶（PEPCK）酶活提高了23．5％。结果表明用“96孔板培养-HPLC浓缩检测-厌氧瓶复筛”的模式能快速有效筛选高产琥珀酸菌株。     

一株丁二酸高产菌株的筛选鉴定及初步发酵研究

以牛胃内容物为菌源,利用富马酸钠为唯一碳源并加入高浓度丁二酸钠的选择培养基筛选到一株丁二酸产量较高,副产物较少的菌株。经形态学、生理生化鉴定和16S rDNA序列的系统发育分析,该菌株为巴斯德菌科的产琥珀酸放线杆菌,与琥珀酸放线杆菌S.JST序列相似性最高为98.98%,命名为琥珀酸放线杆菌GXAS137,保藏号为M2011399。利用正交试验对发酵条件进行了初步优化,该菌可发酵55 g/L葡萄糖产38.96 g/L丁二酸,具有较好的丁二酸生产潜力。     

Actinobacillus succinogenes抗氟乙酸突变株的选育及其代谢流量分析

琥珀酸是一种用于合成树脂、可降解塑料及许多化学中间体的重要绿色化工原料。为了提高琥珀酸的发酵产率, 基于Actinobacillus succinogenes的代谢流量分布情况对其育种机制进行了研究。以Actinobacillus succinogenes CGMCC1593为原始菌株进行NTG诱变, 挑选在含有50~100 mmol/L氟乙酸平板生长较快的菌落, 经过初筛和复筛, 发现SF-9菌株产生更多琥珀酸且积累乙酸较少。以50 g/L的葡萄糖为碳源, 在5 L发酵罐上进行分批发酵, 该菌株发酵32 h时琥珀酸产量(34.8 g/L)提高了23.4%, 琥珀酸/乙酸比率为9:1, 副产物乙酸量比原始菌株降低了约50%。代谢流量分析(MFA)结果表明, PEP是影响琥珀酸合成的关键节点, PYR是影响乙酸等杂酸生成比例的关键节点, 并且这两个节点均非刚性节点。通过氟乙酸抗性诱变, 成功地筛选出了流向乙酸、甲酸和乳酸等杂酸的流量相对减少, 而流向琥珀酸的流量明显增强的突变菌株SF-9。     

Actinobacillus succinogenes抗氟乙酸突变株的选育及其代谢流量分析

琥珀酸是一种用于合成树脂、可降解塑料及许多化学中间体的重要绿色化工原料。为了提高琥珀酸的发酵产率, 基于Actinobacillus succinogenes的代谢流量分布情况对其育种机制进行了研究。以Actinobacillus succinogenes CGMCC1593为原始菌株进行NTG诱变, 挑选在含有50~100 mmol/L氟乙酸平板生长较快的菌落, 经过初筛和复筛, 发现SF-9菌株产生更多琥珀酸且积累乙酸较少。以50 g/L的葡萄糖为碳源, 在5 L发酵罐上进行分批发酵, 该菌株发酵32 h时琥珀酸产量(34.8 g/L)提高了23.4%, 琥珀酸/乙酸比率为9:1, 副产物乙酸量比原始菌株降低了约50%。代谢流量分析(MFA)结果表明, PEP是影响琥珀酸合成的关键节点, PYR是影响乙酸等杂酸生成比例的关键节点, 并且这两个节点均非刚性节点。通过氟乙酸抗性诱变, 成功地筛选出了流向乙酸、甲酸和乳酸等杂酸的流量相对减少, 而流向琥珀酸的流量明显增强的突变菌株SF-9。     

产琥珀酸重组解脂酵母发酵副产物乙酸的代谢控制

琥珀酸是一种高附加值的有机酸,广泛用于食品、化工和农药领域。解脂酵母Yarrowia lipolytica作为新型强健的非传统酵母,近年来逐渐吸引了研究者的注意。前期通过基因敲除琥珀酸脱氢酶基因构建了一株产琥珀酸的重组解脂酵母PGC01003。由于糖酵解和TCA循环流量不协调,PGC01003分泌大量副产物乙酸,限制了琥珀酸产量的进一步提高。为降低乙酸的溢出,实现自然低pH值发酵生产琥珀酸,首先干扰旁路代谢,异源表达来自鼠沙门氏菌的乙酰辅酶A合酶,乙酸的产量下降至4.6 g/L,比对照降低了24.6%。而基因敲除乙酰辅酶A水解酶基因得到的重组菌PGC11505,发酵96 h乙酸分泌量只有0.4 g/L,琥珀酸产量提高到7.0 g/L,琥珀酸的转化率为0.30 g/g,为进一步构建高产琥珀酸的细胞工厂奠定基础。     

Screening,breeding and metabolic modulating of a strain producing succinic acid with corn straw hydrolyte

Purpose In this paper, the high yield mutant strain was expected to be obtained for the industrial bioconversion of corn straw hydrolyte to succinic acid. Methods API biochemical reactions and 16S r RNA sequence analysis were carried out for identification, and then the strain’s metabolic pathway and its relevant enzymes were discussed for the metabolic flux analysis (MFA). The X-ray of synchronous radiation and site-directed mutagenesis were imported for decreasing those byproducts, and the metabolic technics was also modulated. Results Identification showed that the succinic-acid-producing strain S.JST belonged to Actinobacillus succinogenes species. Metabolic pathway analysis indicated that this strain had the character of utilizing glucose and xylose simultaneously, which was a great advantage considering the fact that most crop straw hydrolyte included glucose and xylose. Metabolic flux analysis showed that acetic acid and alcohol competed with the flux of succinic acid, and the analysis of [H] reducing power balance investigated that the [H] electronic donor produced in the cell was not enough for the metabolism of succinic acid. Then X-ray mutagenesis showed that the flux of byproduct acetic acid was decreased to 0.666 from 1.233 mmol/g DW h and that two mutated sites were found in pta (gene of phosphotransacetylase) from mutant strain M.JSTP, but less succinic acid was produced due to the worse lacking in the supply of [H] reducing power. The site-directed mutagenesis showed that the flux of byproduct alcohol was successfully decreased to 0.029 from 1.303 mmol/g DW h. Then, surrounding the flux ratio of HMP to EMP, the metabolic technics was modulated with the addition of citrate in order to improve the balance of [H] reducing power, thus the succinic acid flux of the mutant M.JSTA was increased to 3.163 from 2.480 mmol/g DW h comparing with the parent strain S.JST. Conclusions The mutant strain obtained in this paper deserves to be scaled-up.     

耐铵型产琥珀酸放线杆菌的选育

以Actinobacillus succinogenes NJ113为出发菌株,经硫酸二乙酯(DES)诱变,在含8～20 g/L硫酸铵平板中筛选到一株耐铵型突变株YZ25,该菌株在含8 g/L硫酸铵培养基中厌氧发酵,琥珀酸产量达32.68 g/L,比出发菌提高了180.5%,对葡萄糖收率达65.4%,副产物乙酸、甲酸产量分别下降3.5%、28.7%,琥珀酸/乙酸比值由0.63提高到2.5。在7.5 L发酵罐中,用氨水调节pH分批实验,发酵34 h琥珀酸产量达27.13 g/L,较出发菌株提高了85.3%。     

Metabolic flux analysis for succinic acid production by recombinant Escherichia coli with amplified malic enzyme activity

A pfl ldhA double mutant Escherichia coli strain NZN111 was used to produce succinic acid by overexpressing the E. coli malic enzyme. Escherichia coli strain NZN111 harboring pTrcML produced 6 and 8 g/L of succinic acid from 20 g/L of glucose in flask culture at 37 degrees C and 30 degrees C, respectively. When NZN111(pTrcML) was cultured at 30 degrees C with intermittent glucose feeding the final succinic acid concentration obtained was 9.5 g/L and the ratio of succinic acid to acetic acid was 13:1. This system could not be analyzed by conventional metabolic flux analysis techniques, since some pyruvate and succinic acid were accumulated intracellularly. Therefore, a new flux analysis method was proposed by introducing intracellular pyruvate and succinic acid pools. By this new method the concentrations of intracellular metabolites were successfully predicted and the differences between the measured and calculated reaction rates could be considerably reduced.     

过表达长链鞘氨醇激酶基因LCB4提高酿酒酵母抑制物耐受性

木质纤维素预处理过程中产生的有毒副产物严重影响了纤维素乙醇发酵,提高酿酒酵母抑制物耐受性是提高纤维素乙醇发酵效率的有效方法。文中通过过表达LCB4基因,研究了重组菌株S288C-LCB4在乙酸、糠醛和香草醛胁迫下的细胞生长和乙醇发酵性能。结果表明,LCB4过表达菌株在分别含有10 g/L乙酸、1.5 g/L糠醛和1 g/L香草醛的平板中生长均优于对照菌株;在分别含有10 g/L乙酸、3 g/L糠醛和2 g/L香草醛的液体乙醇发酵过程中,重组菌株S288C-LCB4乙醇发酵产率分别为0.85 g/(L·h)、0.76 g/(L·h)和1.12 g/(L·h),比对照菌株提高了34.9%、85.4%和330.8%;且糠醛和香草醛胁迫下发酵时间分别缩短了30 h和44 h。根据发酵终点发酵液代谢物分析发现重组菌株比对照菌株产生了更多甘油、海藻糖和琥珀酸,这些物质有利于增强菌株的抑制物耐受性。综上所述,LCB4基因过表达可显著提高酿酒酵母S288C在乙酸、糠醛和香草醛胁迫下的乙醇发酵性能。     

High ethanol titers from cellulose by using metabolically engineered thermophilic, anaerobic microbes

This work describes novel genetic tools for use in Clostridium thermocellum that allow creation of unmarked mutations while using a replicating plasmid. The strategy employed counter-selections developed from the native C. thermocellum hpt gene and the Thermoanaerobacterium saccharolyticum tdk gene and was used to delete the genes for both lactate dehydrogenase (Ldh) and phosphotransacetylase (Pta). The Δldh Δpta mutant was evolved for 2,000 h, resulting in a stable strain with 40:1 ethanol selectivity and a 4.2-fold increase in ethanol yield over the wild-type strain. Ethanol production from cellulose was investigated with an engineered coculture of organic acid-deficient engineered strains of both C. thermocellum and T. saccharolyticum. Fermentation of 92 g/liter Avicel by this coculture resulted in 38 g/liter ethanol, with acetic and lactic acids below detection limits, in 146 h. These results demonstrate that ethanol production by thermophilic, cellulolytic microbes is amenable to substantial improvement by metabolic engineering.     

High levels of malic acid production by the bioconversion of corn straw hydrolyte using an isolated Rhizopus delemar strain

The microbial fermentation of malic acid, which is one of the most important organic acid platforms used widely in food and chemical engineering, has attracted considerable interest. A malate production strain was isolated, a mutation was induced, and regulation of the metabolic network was then conducted. The identification results showed that the malic acid production strain, HF- 119, belonged to Rhizopus delemar. An analysis of the metabolic pathway showed that the malic acid flux of this strain occurred through three main pathways, and many byproducts, such as succinic acid, fumaric acid and ethanol, were produced. Although corn straw hydrolyte was used, the metabolism of xylose was not as rapid as that of glucose. Subsequently, breeding of the strains and regulation of the metabolic network resulted in an increase in malate yield, and the strain HF-121 produced more than 120 g/L malic acid within 60 h. The ability to produce malic acid from biomass hydrolyte highlights the industrial development potential of this strain.