植被类型变化对长白山森林土壤碳矿化及其温度敏感性的影响

土壤有机质是陆地生态系统最大的碳库,土壤有机质分解速率及其温度敏感性对生态系统碳循环及其碳汇功能具有重要影响。为揭示植被类型变化对森林土壤有机质分解的影响,以长白山针阔混交林的原生林和次生林为研究对象,分别将土壤在不同水分(30%、60%和90%土壤饱和含水量(SSM))和不同温度(5、10、15、20、25和30 ℃)下培养,在为期56 d的培养期内分9次测定土壤碳矿化速率。实验结果表明:植被类型、培养温度和水分对土壤碳矿化速率具有显著影响,且三者间存在显著的交互效应(P < 0.001)。次生林土壤碳矿化累积量显著高于原生林(P < 0.05),在90% SSM和温度30 ℃培养状况下分别为346.41 μgC/g和241.01 μgC/g。包含温度和水分的双因素模型可很好地拟合土壤碳矿化速率的变化,温度和水分可共同解释土壤碳矿化速率的82.7%-95.9%变异。次生林土壤碳矿化温度敏感性(Q₁₀)显著高于原生林;水分对温度敏感性的影响较复杂,次生林在60% SSM最高,而原生林在90% SSM最高。总之,原生林遭砍伐后将会加速土壤有机质的分解,从而降低土壤有机质含量;另外,根据Q₁₀值可以预测次生林土壤有机质的分解速率对全球变暖反映更明显。     

夏季台湾海峡南部海域上层水体的生物固氮作用

2011年6-7月,利用¹⁵N₂示踪法实测了台湾海峡南部海域的生物固氮速率,结合温度、盐度、天然颗粒物氮同位素组成的分布,分析并讨论了影响研究海域生物固氮速率的环境因素。结果表明,夏季台湾海峡南部海域的生物固氮速率介于 168-1080 nmol m^-3 d^-1之间,平均为537 nmol m^-3 d^-1,较高的生物固氮速率大多出现在次表层水体中。研究站位的积分固氮速率变化范围为11-40 μmol m^-2 d^-1,平均为23 μmol m^-2 d^-1。积分固氮速率的空间变化与不同水团的影响有关,在受黑潮水影响的海域,生物固氮速率较高,而在上升流和受河流冲淡水影响的海域,生物固氮速率较低,说明较低的水温及较高的无机氮营养盐可能会抑制研究海域的生物固氮作用。研究海域天然颗粒物δ¹⁵N与生物固氮速率之间呈现良好的负相关关系,表明天然颗粒物氮同位素组成可定性指征研究海域生物固氮作用的强弱。     

降雨对草地土壤呼吸季节变异性的影响

利用土壤碳通量自动观测系统(LI-8150)对呼伦贝尔草原在自然降雨条件下的土壤呼吸作用进行了野外定位连续观测,研究结果表明:降雨对土壤呼吸作用存在激发效应和抑制效应,降雨发生后1-2 h内土壤呼吸速率可增加约1倍,当单次或者连续降雨累积量大于7-8 mm,或土壤含水量大于29%-30%时,降雨对土壤呼吸会产生明显的抑制作用。土壤呼吸的激发效应往往体现在次日,表现为次日平均土壤呼吸速率的显著升高;而抑制效应则在当日即可体现出来,表现为观测当日平均土壤呼吸速率的明显下降。土壤呼吸季节变异性与降雨频率和降雨强度密切相关,在降雨量一定的情况下,较低的降雨频率和较高的降雨强度会增加土壤呼吸的变异性。呼伦贝尔草甸草原而言,在生长季土壤平均含水量为16.5%时,土壤呼吸的温度敏感性值(Q₁₀)为2.12;而平均土壤含水量为26%时,Q₁₀值为2.82,明显高于前者,土壤含水量与Q₁₀之间存在正相关关系。降雨导致土壤呼吸的激发效应和抑制效应交替发生,使草地土壤呼吸的季节变异性增加,降雨格局变化必然会对草地碳循环和碳通量特征产生深刻影响。     

高寒矮嵩草草甸冬季CO2释放特征

冬季碳排放在高寒草地年内碳平衡中占有重要位置。为探讨高寒草地冬季碳排放特征及温度敏感性,于2003-2005年在中国科学院海北高寒草甸生态系统研究站,利用密闭箱-气相色谱法连续观测了高寒矮嵩草草甸2个冬季的生态系统、土壤呼吸通量特征。结果表明:1)高寒矮嵩草草甸冬季生态系统呼吸、土壤呼吸均具有明显的日变化和季节变化规律,温度是其主要的控制因子,能够解释44%以上的呼吸速率变异。2)冬季生态系统呼吸与土壤呼吸速率在统计上没有显著差异,土壤呼吸占生态系统呼吸的比例高达85%以上。3)2003-2004年冬季生态系统呼吸、土壤呼吸的Q₁₀值分别为1.53,1.38;2004-2005年冬季生态系统呼吸与土壤呼吸的Q₁₀值为1.86,1.68,2个冬季生态系统呼吸的Q₁₀值均高于土壤呼吸。4)未发现高寒矮嵩草草甸冷冬年份的Q₁₀值高于暖冬年份以及冬季的Q₁₀值高于生长季。     

氮添加对樟子松人工林氮转化及相关功能基因丰度的影响

土壤氮(N)的有效性是影响土壤微生物群落结构以及土壤氮循环的重要因子。为探索N添加对樟子松人工林氮素转化及N功能基因(NFGs)表达的影响及其作用机制,该文以塞罕坝千层板林场的樟子松人工林为研究对象,进行了2年的氮添加处理,设置4个不同氮添加水平0、1、5、10 g N·m^-2·a^-1,分别记作N0、N1、N5、N10,采用功能基因微阵GeoChip 5.0系统及室内土壤培养法,探讨了土壤NFGs对氮添加的反应及其对氮转化过程的影响。结果表明:(1)与N0相比,中低N添加处理(N1、N5)促进了氨化(ureC、nirA、nrfA)、硝化(amoA)和反硝化(norB)相关基因的相对丰度,高N处理(N10)则抑制了所有NFGs的表达。(2)相关分析表明,N1、N5的促进作用与土壤有机碳(SOC)、硝态氮(NO₃^--N)和微生物生物量碳(MBC)显著相关,N10处理显著降低了所有氮转化过程NFGs的相对丰度,这种负面影响与溶解性有机碳(DOC)、MBC含量的减少有关。(3)与氮转化基因丰度规律趋势相似,N1和N5处理显著增加了净N硝化、净N矿化以及N₂O的排放速率,但N10促进作用不明显,表明氮添加对氮转化的促进作用存在阈值。(4)多元回归分析进一步表明,amoA-AOB和MBC是影响净N硝化的关键因素,ureC、nirK和MBC是影响净氮矿化的关键因素,narG、nirS是影响N₂O排放的关键因素。综上,N添加可提高促进樟子松人工林的氮转化及提高部分特定酶功能基因的相对丰度,但氮添加水平存在阈值,当施用10 g N·m^-2·a^-1时,氮转化受到抑制,添加5 g N·m^-2·a^-1是促进樟子松人工林土壤N转化的较佳水平。     

荒漠草原土壤微生物矿化对灌丛引入过程及水分的响应

以宁夏荒漠草原封育草地（封育14年）、放牧地为对照,开展不同年限（3a、12a、22a）和间距（40 m、6 m、2 m）柠条地（Caragana korshinskii）灌丛引入过程土壤微生物矿化及对不同水分梯度（自然降雨、前期饱和、持续干旱）响应特征研究。结果表明：灌丛地0-20 cm和0-100 cm土层土壤全氮含量均高于放牧地且随年限和密度增加呈增高趋势,分别为0.28-0.42、0.27-0.42 g/kg和0.28-0.51、0.27-0.51 g/kg,但在22年且密度增至2 m间距的灌丛地与封育草地相比差异不显著或呈降低趋势;微生物量氮变化分别为0.041-0.057、0.041-0.081 mg/kg,且22年灌丛地呈显著降低,2 m间距灌丛地呈显著增加,但均显著低于封育草地0.079 mg/kg和放牧地0.103 mg/kg （P<0.05）;真菌/细菌比值随灌丛地年限和密度增加变化为0.06-0.33,均高于封育草地0.04和放牧地0.03（P<0.05）,微生物变化改变了灌丛地的矿化过程,相较封育草地0.003 mg kg^-1 d^-1和放牧地-0.068 mg kg^-1 d^-1的净矿化速率,不同年限/间距灌丛地虽分别降低为-0.155--0.084、-0.116--0.061 mg kg^-1 d^-1,但均表现为前期加速硝化过程,使得硝态氮则随年限和密度增加呈增加趋势显著高于两样地,而铵态氮变化则较为稳定;封育草地对干旱具缓冲作用,持续矿化,而放牧地和灌丛地净矿化速率对水分降低响应积极,分别降低280.3%和440.2%,其中放牧地和灌丛地以硝化作用变化尤为显著,特别是灌丛地则随干旱加剧净硝化速率均呈显著降低趋势（P<0.05）,其净矿化速率变化以硝化过程占主导。     

蚂蚁筑巢对西双版纳热带森林土壤有机氮矿化的影响

蚂蚁作为生态系统工程师能够调节土壤微生物及理化环境,进而对热带森林土壤有机氮矿化速率及其时间动态产生显著影响。以西双版纳白背桐热带森林群落为研究对象,采用室内需氧培养法测定土壤有机氮矿化速率,比较蚁巢和非蚁巢土壤有机氮矿化速率的时间动态,揭示蚂蚁筑巢活动引起土壤无机氮库、微生物生物量碳及化学性质改变对有机氮矿化速率时间动态的影响。结果表明：（1）蚂蚁筑巢显著影响土壤有机氮矿化速率（P<0.01）,相较于非蚁巢,蚁巢土壤有机氮矿化速率提高了261%;（2）土壤有机氮矿化速率随月份推移呈明显的单峰型变化趋势,即6月最大（蚁巢1.22 mg kg^-1 d^-1、非蚁巢0.41 mg kg^-1 d^-1）,12月最小（蚁巢0.82 mg kg^-1 d^-1、非蚁巢0.18 mg kg^-1 d^-1）;（3）两因素方差分析表明,不同月份及不同处理对土壤有机氮矿化速率、NH₄-N及NO₃-N产生显著影响（P<0.05）,但对NO₃-N的交互作用不显著;（4）蚂蚁筑巢显著提高了无机氮库（NH₄-N与NO₃-N）、微生物生物量碳、有机质、水解氮、全氮及易氧化有机碳等土壤养分含量,而降低了土壤pH值;（5）回归分析表明,铵态氮和硝态氮对土壤有机氮矿化速率产生显著影响,分别解释87.89%、61.84%的有机氮矿化速率变化;（6）主成份分析表明NH₄-N、微生物生物量碳及有机质是影响有机氮矿化速率时间动态的主要因素,而全氮、NO₃-N、易氧化有机碳、水解氮及pH对土壤有机氮矿化速率的影响次之,且pH与土壤有机氮矿化速率呈显著负相关。总之,蚂蚁筑巢活动主要通过影响土壤NH₄-N、微生物生物量碳及有机质的状况,进而调控西双版纳热带森林土壤有机氮矿化速率的时间动态。研究结果将有助于进一步提高对土壤氮矿化生物调控机制的认识。     

内蒙古不同类型草地叶面积指数遥感估算

叶面积指数(Leaf Area Index,LAI)是重要的植被结构参数,反演LAI是植被遥感的重要研究内容之一。根据在内蒙古呼伦贝尔和锡林浩特草原利用LAI 2000观测的草地LAI,比较了不同植被指数(SR、RSR、EVI、NDVI、SAVI和ARVI)估算不同类型草地LAI的能力,建立了基于Landsat-5 TM遥感数据的LAI估算模型,并利用LAI观测数据对模型进行了检验,生成了研究区内草地LAI分布图,据此对MODIS LAI产品一致性进行了评价。结果表明,在呼伦贝尔和锡林浩特两个研究区,RSR与LAI的相关性最高(R²分别为0.628、0.728,RMSE分别为0.512、0.490),在低密度草地,RSR的优势更为明显;验证表明,根据RSR建立的LAI估算模型的精度可达70%;利用TM数据生成的两个地区的LAI(TM LAI)空间变化明显,锡林浩特草地的LAI值整体上低于呼伦贝尔草地;在呼伦贝尔和锡林浩特,MODIS LAI产品与TM LAI一致性分别为0.566,0.323,MODIS LAI产品高估了呼伦贝尔草地LAI值,而在锡林浩特研究区则存在低估现象。     

模拟氮沉降对石栎和苦槠幼苗土壤呼吸的影响

用LI-8100开路式土壤碳通量测量系统测定模拟氮沉降4种不同处理水平(0、60、120\,240 kg · hm^-2 · a^-1)下石栎(Lithocarpus glabra)和苦槠(Castanopsis sclerophylla)幼苗的土壤呼吸速率及土壤温度、含水量对其土壤呼吸的影响。结果表明,氮沉降对土壤呼吸的影响根据施氮水平和幼苗的种类不同而异。低氮(60 kg · hm^-2 · a^-1)处理下石栎和苦槠的土壤呼吸速率平均值分别为(4.014±0.812)μmol · m^-2 · s^-1和(5.170±0.689)μmol · m^-2 · s^-1,比对照组(0 kg · hm^-2 · a^-1)土壤呼吸速率平均值(3.802±0.948)μmol · m^-2 · s^-1和(3.557±0.906)μmol · m^-2 · s^-1分别高5%和45%;两树种在中、高氮处理下均出现对土壤呼吸明显的抑制。其中石栎中、高氮实验组的土壤呼吸速率分别为(2.653±0.681)μmol · m^-2 · s^-1、(2.592±0.736)μmol · m^-2 · s^-1, 比对照组低27%和29%。苦槠中、高氮实验组的土壤呼吸速率为(3.563±0.402)μmol · m^-2 · s^-1、(3.466±0.994)μmol · m^-2 · s^-1, 比对照组低7%和8%;石栎在高氮(240 kg · hm^-2 · a^-1)处理水平下,其土壤呼吸速率同10cm土壤温度之间呈现显著的指数关系(R²=0.811,P=0.001),而在低、中氮实验均未发现有明显指数关系。苦槠各处理水平下其土壤呼吸与土壤温度之间均未发现有明显的指数关系;在土壤呼吸与5cm土壤含水量的相关性方面,仅有苦槠高氮实验组表现出明显的二次方程关系(R²=0.722),而其低、中氮实验组及石栎各实验组均未有明显的相关性;与单因素(温度、含水量)拟合它们与土壤呼吸速率的方程相比,多元回归分析得到的土壤呼吸速率同土壤温度和含水量之间的拟合方程在P=0.05水平上能更好地解释土壤呼吸的变化情况。石栎和苦槠在氮沉降处理下的土壤呼吸温度系数Q₁₀值分别为2.29、1.95、1.59和1.46、1.41、1.76,同对照组2.64和1.78相比,均有明显降低,且两者Q₁₀值的变化分别呈递减和先减小后增大的趋势,表明氮沉降是影响石栎和苦槠土壤CO₂通量的一个重要因素。     

武夷山不同海拔高度土壤氮矿化对温度变化的响应

采集了武夷山4个不同海拔的植物群落（常绿阔叶林、针叶林、亚高山矮林和高山草甸）的土壤样品,在实验室条件下, 将含水量调节为田间持水量60%,置于5 ℃、15 ℃、25 ℃和35 ℃人工气候箱中培养30 d,以测定土壤净氮矿化对温度的敏感性。结果表明：相同海拔植物群落的土壤净氮矿化量和氮矿化速率均随温度的升高显著增加;不同海拔间土壤氮矿化量和氮矿化速率大小均表现为：亚高山矮林>常绿阔叶林>高山草甸>针叶林。土壤氮矿化的Q₁₀在1.03～1.54,并且15 ℃升高到25 ℃时的Q₁₀比5 ℃升高到15 ℃和25 ℃升高到35 ℃时的Q₁₀高,表明土壤氮矿化对温度的敏感性在15 ℃～25 ℃较高。     

The use of small subcutaneous transponders for quantifying thermal biology and torpor in small mammals

Remote measurements of body temperature (T_b) in animals require implantation of relatively large temperature-sensitive radio-transmitters or data loggers, whereas rectal temperature (T_rec) measurements require handling and therefore may bias the results. We investigated whether ∼0.1 g temperature-sensitive subcutaneously implanted transponders can be reliably used to quantify thermal biology and torpor use in small mammals. We examined (i) the precision of transponder readings as a function of temperature and (ii) whether subcutaneous transponders can be used to remotely record subcutaneous temperature (T_sub). Five adult male dunnarts (Sminthopsis macroura, body mass 24 g) were implanted with subcutaneous transponders to determine T_sub as a function of time and ambient temperature (T_a), and in comparison to thermocouple readings of T_rec. Transponder temperature was highly correlated with water bath temperature (r²=0.96–0.99) over a range of approximately 10.0–40.0 °C. Transponders provided reliable data (±0.6 °C) over the T_sub of 21.4–36.9 °C and could be read from a distance of up to 5 cm. Below 21.4 °C, accuracy was reduced to ±2.8 °C, but individual transponder accuracy varied. Consequently, small subcutaneous transponders are useful to remotely quantify thermal physiology and torpor patterns without having to disturb the animal and disrupt torpor. Even at T_sub<21.4 °C where the accuracy of the temperature readings was reduced, transponders do provide reliable data on whether and when torpor is used.     

Thermoregulation in male temperate bats depends on habitat characteristics

Several energy-saving strategies have evolved in animals, one example being the short-term reduction of metabolism and body temperature (torpor) in endotherms. For bats, pronounced torpor behaviour has been described. The aim of this study was to assess individual variation in torpor expression of male Myotis daubentonii, and to analyse whether this variation is related to habitat characteristics. For that we measured skin temperatures of bats from different habitats using radio transmitters and also recorded ambient temperature. Skin temperature was corrected for ambient temperature and individual body mass. Cluster analysis of residuals revealed two different thermoregulatory strategies. Males in cluster 1 were more often encountered torpid and reached lower minimum skin temperatures than males in cluster 2. The differences in behaviour were related to environmental variables (water surface area near the roost, roost altitude, precipitation, ambient temperature in the warmest quarter of the year). Males from cluster 1 occupied less favourable habitats (less water surface, higher altitudes, wetter and colder climate) than males from cluster 2. Our data suggest a linkage between torpor behaviour and habitat characteristics. These characteristics could be used to identify favourable and marginal habitats for M. daubentonii.     

Effect of low-quality diet on torpor frequency and depth in the pichi Zaedyus pichiy (Xenarthra,Dasypodidae), a South American armadillo

Daily torpor is a physiological adaptation that allows mammals to cope with energetic challenges associated with unpredictable periods of food shortage. We experimentally tested whether food quality influences torpor frequency and depth in the pichi (Zaedyus pichiy), a small, opportunistically omnivorous armadillo endemic to arid and semi-arid habitats of southern South America. We recorded body temperature (T_sc) changes in 10 semi-captive, adult female pichis using dataloggers implanted subcutaneously during periods of 21 days. All individuals entered spontaneous daily torpor, but those receiving a low-quality diet had significantly lower daily mean and minimum T_sc, spent more time at T_sc below their individual lower limit of normothermia, and had a higher Heterothermy Index than controls. Five individuals entered prolonged torpor bouts lasting more than 24 h, two of them repeatedly. Nine out of ten prolonged torpor bouts occurred in individuals feeding on a low-quality diet, suggesting that pichis are able to enter prolonged periods of torpor during severe environmental stress. In combination with their ability to hibernate and to respond to a reduced insect abundance by ingesting other food items, this physiological adaptation allows pichis to better cope with food shortages and a more extreme climate than other armadillos. It may explain why Z. pichiy naturally occurs farther south than any other armadillo species.     

Tuning of functional heme reduction potentials in Shewanella fumarate reductases

The fumarate reductases from S. frigidimarina NCIMB400 and S. oneidensis MR-1 are soluble and monomeric enzymes located in the periplasm of these bacteria. These proteins display two redox active domains, one containing four c-type hemes and another containing FAD at the catalytic site. This arrangement of single-electron redox co-factors leading to multiple-electron active sites is widespread in respiratory enzymes. To investigate the properties that allow a chain of single-electron co-factors to sustain the activity of a multi-electron catalytic site, redox titrations followed by NMR and visible spectroscopies were applied to determine the microscopic thermodynamic parameters of the hemes. The results show that the redox behaviour of these fumarate reductases is similar and dominated by a strong interaction between hemes II and III. This interaction facilitates a sequential transfer of two electrons from the heme domain to FAD via heme IV.     

Diurnal pollen tube growth rate is slowed by high temperature in field-grown Gossypium hirsutum pistils

For Gossypium hirsutum pollination, germination, and pollen tube growth must occur in a highly concerted fashion on the day of flowering for fertilization to occur. Because reproductive success could be influenced by the photosynthetic activity of major source leaves, we hypothesized that increased temperatures under field conditions would limit fertilization by inhibiting diurnal pollen tube growth through the style and decreasing subtending leaf photosynthesis. To address this hypothesis, G. hirsutum seeds were sown on different dates to obtain flowers exposed to contrasting ambient temperatures while at the same developmental stage (node 8 above the cotyledons). Collection and measurement were conducted at 06:00, 09:00, 12:00, 15:00, and 18:00 h on August 4 (34.6 °C maximum air temperature) and 14, 2009 (29.9 °C maximum air temperature). Microclimate measurements included photosynthetically active radiation, relative humidity, and air temperature. Pistil measurements included pistil surface temperature, pollen germination, pollen tube growth through the style, fertilization efficiency, fertilized ovule number, and total number of ovules per ovary. Subtending leaf measurements included leaf temperature, photosynthesis, and stomatal conductance. Under high temperatures the first measurable pollen tube growth through the style was observed earlier in the day (12:00 h) than under cooler conditions (15:00 h). Also, high temperature resulted in slower pollen tube growth through the style (2.05 mm h⁻¹) relative to cooler conditions (3.35 mm h⁻¹), but there were no differences in fertilization efficiency, number of fertilized ovules, or ovule number. There was no effect of sampling date on diurnal photosynthetic patterns, where the maximum photosynthetic rate was observed at 12:00 h on both dates. It is concluded that, of the measured physiological and reproductive processes, pollen tube growth rate showed the greatest sensitivity to high temperature under field conditions.     

Water deficit in field-grown Gossypium hirsutum primarily limits net photosynthesis by decreasing stomatal conductance,increasing photorespiration,and increasing the ratio of dark respiration to gross photosynthesis

Much effort has been expended to improve irrigation efficiency and drought tolerance of agronomic crops; however, a clear understanding of the physiological mechanisms that interact to decrease source strength and drive yield loss has not been attained. To elucidate the underlying mechanisms contributing to inhibition of net carbon assimilation under drought stress, three cultivars of Gossypium hirsutum were grown in the field under contrasting irrigation regimes during the 2012 and 2013 growing season near Camilla, Georgia, USA. Physiological measurements were conducted on three sample dates during each growing season (providing a broad range of plant water status) and included, predawn and midday leaf water potential (Ψ_PD and Ψ_MD), gross and net photosynthesis, dark respiration, photorespiration, and chlorophyll a fluorescence. End-of-season lint yield was also determined. Ψ_PD ranged from −0.31 to −0.95 MPa, and Ψ_MD ranged from −1.02 to −2.67 MPa, depending upon irrigation regime and sample date. G. hirsutum responded to water deficit by decreasing stomatal conductance, increasing photorespiration, and increasing the ratio of dark respiration to gross photosynthesis, thereby limiting P_N and decreasing lint yield (lint yield declines observed during the 2012 growing season only). Conversely, even extreme water deficit, causing a 54% decline in P_N, did not negatively affect actual quantum yield, maximum quantum yield, or photosynthetic electron transport. It is concluded that P_N is primarily limited in drought-stressed G. hirsutum by decreased stomatal conductance, along with increases in respiratory and photorespiratory carbon losses, not inhibition or down-regulation of electron transport through photosystem II. It is further concluded that Ψ_PD is a reliable indicator of drought stress and the need for irrigation in field-grown cotton.     

Spatio-temporal variability in the photosynthetic characteristics of Zostera tasmanica measured by PAM

Rapid light curves (RLCs), based on pulse amplitude modulated (PAM) fluorometry, were used to investigate the spatio-temporal variability in photosynthesis versus irradiance parameters (α, I_k and P_max) and the F_v/F_m ratio of the seagrass Zostera tasmanica (formerly Heterozostera tasmanica). Spatial variation was examined across scales ranging from within a leaf (cms) to across the bed (ms), using a nested analysis of covariance sampling design. Overall, significant variation was identified at all scales examined, excluding the largest scale (area). Patterns of variability differed among individual parameters; however a high percentage of the variation was consistently assigned to the covariates, age (within and between leaves) for all parameters, except P_max.     

Electron transfer kinetics between soluble modules of Paracoccus denitrificans cytochrome c1 and its physiological redox partners

The transient electron transfer (ET) interactions between cytochrome c₁ of the bc₁-complex from Paracoccus denitrificans and its physiological redox partners cytochrome c₅₅₂ and cytochrome c₅₅₀ have been characterized functionally by stopped-flow spectroscopy. Two different soluble fragments of cytochrome c₁ were generated and used together with a soluble cytochrome c₅₅₂ module as a model system for interprotein ET reactions. Both c₁ fragments lack the membrane anchor; the c₁ core fragment (c_1CF) consists of only the hydrophilic heme-carrying domain, whereas the c₁ acidic fragment (c_1AF) additionally contains the acidic domain unique to P. denitrificans. In order to determine the ionic strength dependencies of the ET rate constants, an optimized stopped-flow protocol was developed to overcome problems of spectral overlap, heme autoxidation and the prevalent non-pseudo first order conditions. Cytochrome c₁ reveals fast bimolecular rate constants (10⁷ to 10⁸ M^− 1 s^− 1) for the ET reaction with its physiological substrates c₅₅₂ and c₅₅₀, thus approaching the limit of a diffusion-controlled process, with 2 to 3 effective charges of opposite sign contributing to these interactions. No direct involvement of the N-terminal acidic c₁-domain in electrostatically attracting its substrates could be detected. However, a slight preference for cytochrome c₅₅₀ over c₅₅₂ reacting with cyochrome c₁ was found and attributed to the different functions of both cytochromes in the respiratory chain of P. denitrificans.     

不同温度及二氧化碳浓度下培养的龙须菜光合生理特性对阳光紫外辐射的响应

为了研究不同温度及CO₂浓度下培养的大型海藻对紫外辐射的生理学响应,选取龙须菜(Gracilaria lemaneiformis)作为实验材料。实验设置两个温度梯度(20 ℃和24 ℃),两种CO₂浓度(390 μL/L和1000 μL/L)以及3种辐射处理,即可见光(PAR)处理(滤除紫外线A(UV-A)、紫外线B(UV-B),400-700 nm)、可见光加紫外线A(PA)处理(滤除UV-B,320-700 nm)、PAB处理(全波长辐射280-700 nm)。结果表明,酸化、升温以及紫外辐射处理都未影响大型经济红藻龙须菜的叶绿素a和类胡萝卜素的含量。然而紫外辐射处理显著降低了龙须菜的有效光化学效率,其抑制水平在酸化处理的藻体中更为显著,并且随着温度的上升而进一步加剧;酸化与温度耦合使藻体对紫外辐射的敏感性增加,导致其较低的修复速率以及较高的损伤速率。     

Thermodynamic and kinetic characterisation of individual haems in multicentre cytochromes c3

The characterisation of individual centres in multihaem proteins is difficult due to the similarities in the redox and spectroscopic properties of the centres. NMR has been used successfully to distinguish redox centres and allow the determination of the microscopic thermodynamic parameters in several multihaem cytochromes c₃ isolated from different sulphate-reducing bacteria. In this article we show that it is also possible to discriminate the kinetic properties of individual centres in multihaem proteins, if the complete microscopic thermodynamic characterisation is available and the system displays fast intramolecular equilibration in the time scale of the kinetic experiment. The deconvolution of the kinetic traces using a model of thermodynamic control provides a reference rate constant for each haem that does not depend on driving force and can be related to structural factors. The thermodynamic characterisation of three tetrahaem cytochromes and their kinetics of reduction by sodium dithionite are reported in this paper. Thermodynamic and kinetic data were fitted simultaneously to a model to obtain microscopic reduction potentials, haem-haem and haem-proton interacting potentials, and reference rate constants for the haems. The kinetic information obtained for these cytochromes and recently published data for other multihaem cytochromes is discussed with respect to the structural factors that determine the reference rates. The accessibility for the reducing agent seems to play an important role in controlling the kinetic rates, although is clearly not the only factor.