蛋白质组学研究揭示的甘蓝型油菜非生物胁迫应答机制

油菜(Brassica napus L.)是我国的主要油料作物之一,在生长发育过程中经常受到干旱、高温、高盐和营养缺乏等非生物胁迫。这些胁迫通常会阻碍油菜的生长发育,导致品质和产量下降。近年来,快速发展的高通量蛋白质组学技术为揭示油菜胁迫响应分子机制提供了新线索。本文综合分析了油菜不同组织/器官(如:叶片、根、下胚轴和种子)在响应盐、高温、干旱、草酸和缺素(磷、硫和硼)等逆境过程中675种蛋白质的丰度变化特征,揭示了其胁迫应答机制,主要包括:(1)通过G蛋白介导的信号通路感知与传递胁迫信号;(2)通过改变参与糖类与能量代谢相关酶的丰度调节代谢水平;(3)通过叶绿素合成的变化调节光合作用;(4)调节转录因子、蛋白质合成与命运相关蛋白质的丰度,从而在转录、翻译以及翻译后修饰等水平上应答逆境;(5)通过调节膜联蛋白、V型H+-ATP酶等质膜蛋白质,促进细胞内物质吸收与转运;(6)通过细胞骨架动态重塑保持正常细胞结构;(7)利用调节抗氧化酶系统清除活性氧,并通过合成多种防御物质减轻细胞受到的伤害。本综述为解析油菜逆境应答网络体系中的关键调控及代谢通路的变化提供了重要信息。     

蛋白质组学研究揭示的植物根盐胁迫响应机制

植物根是感知外界盐胁迫信号的首要器官。近年来,人们利用高通量的差异表达蛋白质组学技术,分析了水稻(Oryzasativa)、拟南芥(Arabidopsis thaliana)、大豆(Glycine max)、大麦(Hordeum vulgare)、小麦(Triticum aestivum)、木榄(Bruguieragymnorhiza)和匍匐翦股颖(Agrostis stolonifera)等植物根应答盐胁迫过程中蛋白质组的动态变化特征。通过整合植物根响应盐胁迫蛋白质组学研究结果,揭示了植物根部响应盐胁迫的多种调节机制,包括:利用多种信号通路与蛋白质磷酸化/去磷酸化感知并传递盐胁迫信号;通过膜蛋白与转运蛋白调节离子吸收/外排与区室化;通过抗氧化酶系统活性清除活性氧,并通过合成多种渗透调节物质与防御物质减轻细胞受到的伤害;通过改变参与糖类与能量代谢相关酶的表达调节能量代谢水平;通过细胞骨架动态重塑保持正常的细胞结构、物质运输与信息传递;通过转录、翻译与翻译后调控调节各种蛋白质的动态变化与相互作用;通过调控各种基础代谢与次生代谢水平保持细胞结构与代谢状态正常。     

植物盐胁迫应答蛋白质组学分析

土壤盐渍化是限制植物生长和分布的关键因素之一,揭示植物盐胁迫应答的分子机理是借助分子生物学手段提高植物耐盐性的基础.近年来,人们利用高通量蛋白质组学技术分析了拟南芥、水稻等19种植物的盐胁迫应答蛋白质表达图谱.从植物类群(盐生植物和甜土植物)、组织器官(根、地上部分/茎、胚根和胚轴、叶片、花序和配子体)、细胞(悬浮培养细胞、愈伤组织细胞和单细胞生物)和亚细胞结构(叶绿体、质膜和质外体)几方面整合分析了植物盐胁迫应答蛋白质组表达模式特征,主要特征包括:(1)盐生植物通过全面调节细胞骨架重塑、离子转运和区隔化、渗透平衡、活性氧(ROS)清除、信号转导、光合作用和能量代谢等信号与代谢网络体系,获得相对较高的抗/耐盐能力;(2)植物地上部分(叶片、茎、配子体)或光合组织细胞(悬浮培养细胞、愈伤组织细胞和单细胞盐藻)通过调节参与光合作用、碳和能量代谢、ROS清除过程蛋白质的表达模式应对盐胁迫环境;(3)植物地下部分(根、胚根)通过调控信号转导和离子转运相关蛋白质感知/传递盐胁迫信号并维持离子平衡;(4)花序中参与渗透调节、转录调控、蛋白质加工和ROS清除的蛋白质在盐胁迫条件下变化显著;(5)叶绿体通过调控参与光合作用、蛋白质加工和周转,以及氧化还原系统平衡等过程应对盐胁迫;(6)质外体中参与细胞壁代谢、胁迫防御和信号转导过程的蛋白质受盐胁迫影响明显;(7)细胞膜中参与维持膜结构稳定、物质/离子运输和信号转导过程的蛋白质对植物盐胁迫应答具有重要作用.这些分析为深入研究植物耐盐的分子机制提供了重要信息.     

质膜H+-ATPase与环境胁迫

植物根系质膜H -ATPase在调节细胞内pH值,促进养分吸收、同化物运输等方面具有重要作用。对质膜H -ATPase的结构、功能和分子机制进行综述,并讨论了质膜H -ATPase在信号传递过程及植物适应环境胁迫中的作用,最后就植物质膜H -ATPase的研究及应用提出几点看法。     

解析植物冷信号转导途径: 植物如何感知低温

低温胁迫(冷害和冻害)严重影响植物的生长发育和地理分布, 是制约作物产量和品质的主要因素之一。在自然界, 植物通过感知低温信号并启动一系列响应机制来抵御冷冻伤害。MAP蛋白激酶家族在植物响应逆境胁迫信号过程中发挥重要作用, 但其是否参与冷冻胁迫信号传递仍不清楚。最近, 朱健康、杨淑华和种康研究团队先后报道了拟南芥(Arabidopsis thaliana)和水稻(Oryza sativa)通过MAPK级联反应途径参与冷冻胁迫应答反应, 通过磷酸化ICE1来调控其稳定性, 并阐明了ICE1提高植物抗冷冻能力的分子机制。他们的研究完善了ICE1介导的低温应答网络, 是植物低温应答研究领域的重要突破, 并为未来的作物分子设计育种提供了强有力的理论依据。     

从水分胁迫的识别到ABA积累的细胞信号转导

由于植物在生长和发育过程中不可避免地要遭受各种环境胁迫的影响 ,植物只有通过对环境胁迫的快速感知和主动反应才得以生存和发展。植物这种对环境胁迫的快速感知和主动反应体现在环境胁迫下植物可以通过一系列基因的表达调控来实现各种抗逆的生理生化反应。虽然得以鉴定的水分胁迫应答基因越来越多 ,但其中只有极少的基因在抗逆中的基本功能已得到初步认识。从细胞对水分胁迫原初信号的感知到基因表达调控包括了一系列复杂的细胞逆境信息传递过程。脱落酸 (abscisicacid ,ABA)作为重要的细胞逆境信号物质介导了一系列基因表达 ,因此从细胞对水分胁迫原初信号的感知到编码ABA生物合成关键酶基因的表达是一条最为关键的细胞逆境信息传递途径。逆境应答基因功能的鉴定以及对整个细胞信号传递过程中详尽的分子机制的了解无疑是今后最有趣的也是最为重要的研究课题。     

植物应答非生物胁迫的蛋白质组学研究进展

逆境对植物的生长发育产生不利影响,植物在长期适应环境中演化出了相应的机制。蛋白质是基因表达的最终产物,是细胞生命活动的基础,在逆境条件下,许多与逆境相关的蛋白质表达量发生变化。蛋白质组学技术的发展为鉴定和研究逆境响应相关蛋白提供了手段,为阐述逆境应答分子机理提供了重要的依据。本综述根据近年来采用蛋白质组学研究植物应答非生物胁迫(干旱,高盐和低温)的结果,总结并讨论了不同逆境下蛋白表达的组织特异性特点,旨在为理解植物的逆境胁迫响应机制提供更多信息。     

蛋白质可逆磷酸化调节植物细胞离子跨膜运动研究进展

蛋白激酶和蛋白磷酸酶催化的可逆磷酸化是植物细胞中多种信号转导途径中重要的组成因子.本文对蛋白质可逆磷酸化通过调节多种离子跨膜运动而参与植物细胞激发子信号途径、毒性物质诱导的钙离子内流、盐胁迫适应、气孔运动以及蛋白质可逆磷酸化参与胞外与胞内之间Ca2 状况信息传递,调节花粉管顶端Ca2 离子通道活性进行综述,以揭示蛋白质可逆磷酸化在植物细胞离子跨膜运动中的调控作用,为蛋白质可逆磷酸化调节植物生长发育、响应逆境胁迫等机理的研究提供参考.     

从水分胁迫的识别到ABA积累的细胞信号转导

由于植物在生长和发育过程中不可避免地要遭受各种环境胁迫的影响,植物只有通过对环境胁迫的快速感知和主动反应才得以生存和发展.植物这种对环境胁迫的快速感知和主动反应体现在环境胁迫下植物可以通过一系列基因的表达调控来实现各种抗逆的生理生化反应.虽然得以鉴定的水分胁迫应答基因越来越多,但其中只有极少的基因在抗逆中的基本功能已得到初步认识.从细胞对水分胁迫原初信号的感知到基因表达调控包括了一系列复杂的细胞逆境信息传递过程.脱落酸(abscisic acid, ABA)作为重要的细胞逆境信号物质介导了一系列基因表达,因此从细胞对水分胁迫原初信号的感知到编码ABA生物合成关键酶基因的表达是一条最为关键的细胞逆境信息传递途径.逆境应答基因功能的鉴定以及对整个细胞信号传递过程中详尽的分子机制的了解无疑是今后最有趣的也是最为重要的研究课题.     

质膜转运蛋白及其与植物耐盐性关系研究进展

植物细胞质膜有两种主要功能：(1)溶质运输(进出细胞),溶质运输主要由转运蛋白完成;(2)信号传导,即接收信号并引发细胞生理生化响应。盐分过多对植物的伤害主要是离子毒害。质膜转运蛋白活性对环境变化能做出迅速响应。本文简要叙述了植物细胞质膜转运蛋白类型、分子特性、生理功能及其活性调节。介绍了植物细胞质膜H+_ATPase、质膜氧化还原系统、质膜离子载体和离子通道对盐胁迫的响应及其这些响应与植物耐盐性之间的关系。     

Plant stress surveillance monitored by ABA and disease signaling interactions

Abiotic and biotic stresses are the major factors that negatively impact plant growth. In response to abiotic environmental stresses such as drought, plants generate resistance responses through abscisic acid (ABA) signal transduction. In addition to the major role of ABA in abiotic stress signaling, ABA signaling was reported to downregulate biotic stress signaling. Conversely recent findings provide evidence that initial activation of plant immune signaling inhibits subsequent ABA signal transduction. Stimulation of effector-triggered disease response can interfere with ABA signal transduction via modulation of internal calcium-dependent signaling pathways. This review overviews the interactions of abiotic and biotic stress signal transduction and the mechanism through which stress surveillance system operates to generate the most efficient resistant traits against various stress condition.     

Proteomics reveals new salt responsive proteins associated with rice plasma membrane

The signaling processes in plants that initiate cellular responses to biotic and abiotic factors are believed to be located in the plasma membrane (PM). A better understanding of the PM proteome response to environmental stresses might lead to new strategies for improving stress-tolerant crops. A sub-cellular proteomics approach was applied to monitor changes in abundance of PM-associated protein in response to salinity, a key abiotic stress affecting rice productivity worldwide. Proteome was extracted from a root plasma-membrane-rich fraction of a rice salt tolerant variety, IR651, grown under saline and normal conditions. Comparative two-dimensional electrophoresis revealed that 24 proteins were differentially expressed in response to salt stress. From these, eight proteins were identified by mass spectrometry analysis. Most of the proteins identified are likely to be PM-associated and are known to be involved in several important mechanisms of plant adaptation to salt stress. These include regulation of PM pumps and channels, membrane structure, oxidative stress defense, signal transduction, protein folding, and the methyl cycle. To investigate the correlation between mRNA and protein level in response to salinity, we performed quantitative Real-Time PCR analysis of three genes that were salt responsive at the protein level, including 1,4-Benzoquinone reductase, a putative remorin and a hypersensitive induced response protein. No concordance was detected between the changes in levels of gene and protein expression. Our results indicate that the proteomics approach is suitable for expression analysis of membrane associated proteins under salt stress.     

Proteomics Reveals New Salt Responsive Proteins Associated with Rice Plasma Membrane

The signaling processes in plants that initiate cellular responses to biotic and abiotic factors are believed to be located in the plasma membrane (PM). A better understanding of the PM proteome response to environmental stresses might lead to new strategies for improving stress-tolerant crops. A sub-cellular proteomics approach was applied to monitor changes in abundance of PM-associated protein in response to salinity, a key abiotic stress affecting rice productivity worldwide. Proteome was extracted from a root plasma-membrane-rich fraction of a rice salt tolerant variety, IR651, grown under saline and normal conditions. Comparative two-dimensional electrophoresis revealed that 24 proteins were differentially expressed in response to salt stress. From these, eight proteins were identified by mass spectrometry analysis. Most of the proteins identified are likely to be PM-associated and are known to be involved in several important mechanisms of plant adaptation to salt stress. These include regulation of PM pumps and channels, membrane structure, oxidative stress defense, signal transduction, protein folding, and the methyl cycle. To investigate the correlation between mRNA and protein level in response to salinity, we performed quantitative Real-Time PCR analysis of three genes that were salt responsive at the protein level, including 1,4-Benzoquinone reductase, a putative remorin and a hypersensitive induced response protein. No concordance was detected between the changes in levels of gene and protein expression. Our results indicate that the proteomics approach is suitable for expression analysis of membrane associated proteins under salt stress.     

Comparative proteomic analysis of the Arabidopsis cbl1 mutant in response to salt stress

Many environmental stimuli, including light, biotic and abiotic stress factors, induce changes in cellular Ca(2+) concentrations in plants. Such Ca(2+) signatures are perceived by sensor molecules such as calcineurin B-like (CBL) proteins. AtCBL1, a member of the CBL family which is highly inducible by multiple stress signals, is known to function in the salt stress signal transduction pathway and to positively regulate the plant tolerance to salt. To shed light into the molecular mechanisms of the salt stress response mediated by AtCBL1, a two-dimensional DIGE proteomic approach was applied to identify the differentially expressed proteins in Arabidopsis wild-type and cbl1 null mutant plants in response to salt stress. Seventy-three spots were found altered in expression by least 1.2-fold and 50 proteins were identified by MALDI-TOF/TOF-MS, including some well-known and novel salt-responsive proteins. These proteins function in various processes, such as signal transduction, ROS scavenging, energy production, carbon fixation, metabolism, mRNA processing, protein processing and structural stability. Receptor for activated C kinase 1C (RACK1C, spot 715), a WD40 repeat protein, was up-regulated in the cbl1 null mutant, and two rack1c mutant lines showed decreased tolerance to salt stress, suggesting that RACK1C plays a role in salt stress resistance. In conclusion, our work demonstrated the advantages of the proteomic approach in studies of plant biology and identified candidate proteins in CBL1-mediated salt stress signaling network.     

乙烯信号转导的分子机制

气态植物激素乙烯在植物生长发育和应对生物及非生物胁迫过程中起着重要作用。在过去的十几年中, 对模式植物拟南芥的分子遗传研究已建立从信号感知到转录调控的乙烯信号转导线性模型。拟南芥共有5个乙烯受体ETR1、ERS1、ETR2、ERS2和EIN4, 目前已知ETR1定位在内质网上, 与类似于Raf的蛋白激酶CTR1协同负调控乙烯反应。EIN2和EIN3/EILs位于CTR1下游, 正调控乙烯反应。两个F-box蛋白EBF1和EBF2通过泛素/26S蛋白体降解途径调控EIN3的稳定性。5’→3’的外切核酸酶EIN5通过启动EBF1和EBF2 mRNA的降解, 拮抗EBF1和EBF2对EIN3的负反馈调控。目前对于乙烯信号转导途径关键组分的生化功能和乙烯下游反应途径的了解甚少, 乙烯信号转导途径与其它途径之间还存在着广泛的交叉反应, 这些问题的解决将大大增加我们对乙烯信号转导途径的了解。     

植物体内钙信号及其在调节干旱胁迫中的作用

钙作为植物体内第二信使广泛参与了植物响应的各种非生物和生物胁迫的信号传导。胁迫信号通过激活位于细胞质膜上的钙离子通道,产生胞质内特异性的钙信号,传递至钙信号感受蛋白,如钙调素(calmodulin,CaM)、钙依赖蛋白激酶(Ca2+-dependent protein kinases,CDPK)和类钙调磷酸酶B蛋白(calcineurin B-like protein,CBL)等,进而引起胞内一系列生理生化变化,最终对胁迫做出响应。钙信号在植物响应干旱胁迫信号系统中起枢纽作用,主要通过调节气孔运动,水通道蛋白(aquaporin,AQP)和抗氧化酶活性来减少水分流失,提高水分利用率,最终降低干旱对植物细胞的伤害,并具有一定的生态学功能。该文对近年来国内外有关植物体内钙信号的研究进展以及在干旱逆境中的调节作用进行综述,并对今后的研究做了展望。     

植物中的MAPK及其在信号传导中的作用

促分裂原活化蛋白激酶(MAPKs)是一类存在于真核生物中的丝氨酸/苏氨酸蛋白激酶。同动物和酵母中MAPKs类似,植物中的MAPK级联途径也是由MAPKs、MAPKKs、MAPKKKs三种类型的激酶组成。植物细胞内受体接受外界刺激信号,然后依次磷酸化激活MAPKKKs、MAPKKs和MAPKs,并影响相关基因表达。目前已经从植物中分离到一些MAPKs、MAPKKs和MAPKKKs,它们参与了植物激素、生物胁迫及非生物胁迫等过程的信号传导。介绍了植物响应外界环境胁迫过程中,不同机制和因子对MAPKs级联途径的调控。