湿地土壤微生物功能多样性及碳氮组分对长期氮输入的响应

氮输入对湿地生态系统碳氮循环具有重要影响,研究湿地土壤微生物功能多样性及碳氮组分对氮输入的响应,对于明确湿地土壤碳氮循环微生物驱动机制具有重要意义。依托长期野外氮输入模拟试验,利用Biolog-ECO微平板技术,分析不同浓度氮输入:N1(6 g N m^-2 a^-1)、N2(12 g N m^-2 a^-1)和N3(24 g N m^-2 a^-1)对湿地土壤表层(0-15 cm)和亚表层(15-30 cm)微生物碳源代谢活性、功能多样性和碳氮组分的影响。结果表明:N2处理显著提高了亚表层土壤微生物碳源代谢活性和McIntosh指数,N3处理显著降低了表层土壤微生物Shannon指数和Shannon-evenness指数。随氮输入浓度增加湿地表层土壤微生物对糖类的利用率显著降低,N3处理表层土壤微生物对胺类的利用率以及亚表层土壤微生物对醇类的利用率显著提高。N1处理显著提高了湿地表层土壤全氮和微生物量碳含量;N2、N3处理显著提高了土壤铵态氮、硝态氮含量;N3处理显著降低了土壤pH值。湿地土壤pH、总碳、溶解性有机碳含量是影响微生物碳源代谢活性和功能多样性的重要因素,土壤溶解性有机碳、铵态氮、全氮含量、含水率是影响微生物碳源利用变化的主要因子。     

溪流两边的湿地对其含氮量的贡献（英）

本文对美国科罗拉多洛基山国家公园内Loch Vale小流域溪流两边的湿地土壤水溶液中的含氮量进行了研究,并比较了与其相邻的溪流中的含氮量。结果发现,溪流中的硝态氮含量显著高于3个湿地土壤水溶液中的,而氨态氮则并没有显著差异;溪流水中的pH值要显著高于土壤水溶液中的,而电导率又显著低于后者。同时,还发现取自不同地点的溪流水分的化学性质也显著的不同,采自溪流支流水分的pH,电导率和硝态氮都要显著高于取自主溪流中的水分的。另外,还分析比较了3个湿地样地的地上部分生产力以及土壤和生物量中的碳和全氮含量。最后,我们认为溪流两边的湿地对溪流中的氮的含量并没有显著的影响。     

黑河下游湿地土壤有机氮组分剖面的分布特征

结合野外调查,用Bremner法研究了黑河下游湿地不同土壤类型的有机氮组分,结果表明:在0—50 cm土层,5种土壤有机氮均以酸解性氮为主,占全氮的71.04%—81.79%。泥炭土、沼泽土、草甸土、亚高山草甸土所含的酸解氮、非酸解氮和酸解氮组分氨态氮、氨基酸态氮、氨基糖态氮含量的剖面分布总体上均随土层深度的增加而呈降低趋势,而风沙土却相反,上述有机氮组分呈升高趋势。5种土壤酸解氮及其组分氨态氮、氨基酸态氮、氨基糖态氮占全氮比例的剖面分布总体上均随土层深度的增加而呈降低趋势,而非酸解氮却呈升高趋势。5种土壤酸解未知态氮含量及占全氮比例均在剖面分布上无明显特征。在0—30 cm各相同土层内,5种土壤酸解氮各组分含量及占全氮比例的大小顺序均为氨基酸态氮氨态氮未知态氮氨基糖态氮;而在30—50 cm土层,5种土壤酸解氮各组分含量及占全氮比例的大小顺序均无明显特征。此外,黑河下游湿地土壤干化、沙化过程中,表层0—10 cm土壤有机氮组分含量变化明显,其中土壤氨态氮对生态环境变化最为敏感。     

黑河中游湿地不同恢复方式对土壤和植被的影响——以张掖国家湿地公园为例

湿地是自然界最富生物多样性的生态景观和人类社会赖以生存和发展的环境之一,对维护生态系统功能和区域生态安全有着重要意义。为阐明不同湿地恢复方式对土壤和植被的影响,以黑河中游地区张掖国家湿地公园为研究对象,比较了自然恢复方式、恢复利用方式和恢复保护方式下植物多样性、植物生长状态、土壤pH、盐分、容重、水分含量、有机碳、全氮、全磷、速效氮、速效磷的变化特征,研究结果表明:在自然恢复方式下,湿地各层土壤全磷、土壤速效磷、土壤速效氮、物种多样性值最高,反映出自然恢复方式可能成为干旱区土壤磷固存的有效手段,适当干扰可能成为干旱区提高物种多样性的有效方法;恢复保护方式下,湿地植物多度最高165.67±25,表明恢复保护方式有助于植被的生长繁殖;恢复利用方式下,湿地各层土壤含水量、土壤有机碳、土壤全氮、植被盖度值最高,土壤盐分含量、土壤pH值最低,湿地物种多样性较高。表明恢复利用方式可以有效降低湿地土壤盐分,提高土壤碳、氮含量的潜力,适当人为管理可能成为干旱区湿地恢复过程中提高湿地物种多样性的有效管理方法。该研究结果对于干旱区湿地恢复、保护与重建的效应评估和恢复方式的选择提供一定的理论支持和决策参考。     

长期模拟升温对崇明东滩湿地土壤微生物生物量的影响

以崇明东滩芦苇湿地为对象,采用开顶室生长箱(Open top chambers OTCs)原位模拟大气升温试验,研究了连续升温8a对崇明东滩湿地0—40cm土层土壤微生物生物量碳氮含量的影响。结果表明:连续升温显著提高了崇明东滩湿地土壤微生物生物量碳氮含量,从土壤表层到深层(0—10,10—20,20—30,30—40cm),微生物生物量碳分别增加了39.32%、70.79%、65.20%、74.09%,微生物生物量氮分别增加了66.46%、178.27%、47.24%、64.11%。但升温对土壤微生物生物量的影响因不同土层和不同季节并未表现出统一的规律,长期模拟升温显著提高4月0—20cm土层和7月0—40cm土层微生物生物量碳氮含量,对10月0—40cm土层微生物生物量碳含量没有影响,但是显著提高了10月0—40cm土层微生物生物量氮含量,同时,微生物生物量碳氮比在7月也显著提高。相关分析表明:无论在升温条件还是在对照条件下,土壤温度、含水量、总氮与土壤微生物生物量碳氮及微生物生物量碳氮比均无相关关系,升温条件下,有机碳与微生物生物量碳氮含量以及微生物生物量碳氮比呈显著正相关,但是在对照条件下有机碳与微生物生物量碳氮含量以及微生物生物量碳氮比呈显著负相关。因此,土壤有机碳是影响土壤微生物生物量碳氮含量对长期模拟升温响应的重要生态因子。     

桂林会仙喀斯特湿地芦苇群落土壤氮的季节变化

该研究以桂林会仙喀斯特湿地典型芦苇植物群落土壤为对象,研究了土壤氮含量的季节动态变化特征,探讨了土壤氮对水热季节变化的响应趋势。结果表明:土壤有机氮在全氮中所占比例较大,0~10 cm土层的全氮与0~10 cm和10~20 cm土层的速效氮季节变化特征一致,表现为夏季秋季春季冬季;10~20 cm和20~30 cm土层的全氮和有机氮均表现为春季夏季秋季冬季。0~10 cm土层的有机氮和10~20 cm土层的速效氮变化趋势一致,表现为秋季夏季春季冬季。各层土壤硝态氮呈现出先升高后降低的单峰曲线变化趋势,均表现为夏季春季秋季冬季,并与铵态氮0~10 cm和10~20 cm土层的季节变化趋势相一致。20~30 cm土层的铵态氮与0~10 cm和20~30 cm土层的土壤微生物量氮含量时间动态一致,均表现为春季秋季夏季冬季,10~20 cm土层的微生物量氮表现为秋季春季夏季冬季的趋势。土壤铵态氮含量明显高于硝态氮,各层土壤铵态氮含量基本呈现出不规则"M"形的双峰曲线变化。会仙喀斯特湿地典型芦苇植物群落不同土层土壤各形态氮含量的动态特征对水热变化的季节响应差异较大,不同月份之间有所不同,但均在冬季含量最低,与月均气温和月均降雨量的变化关系表现为不完全的同步趋势。土壤氮含量季节变化特征的差异主要与气温、水分条件、不同生长期芦苇吸收利用、土壤有机碳、凋落物养分的归还以及有机氮矿化等影响有关。该研究结果为桂林会仙喀斯特国家湿地公园生态功能恢复与可持续发展利用提供了科学依据。     

盐城海滨湿地盐沼植被对土壤碳氮分布特征的影响

在盐城海滨湿地不同植被带下采集土壤样品,研究了土壤有机碳和全氮的空间分布特征,分析了盐沼植物对湿地土壤碳、氮分布的影响.结果表明：在盐城海滨湿地,表层土壤中有机碳和全氮含量分别介于1.71～7.92 g·kg^-1和0.17～0.36 g·kg^-1之间,变幅较大,不同植被带之间存在显著差异,且各植被带表层土壤中有机碳、全氮含量均高于光滩.垂直方向上,各植被带土壤中有机碳、全氮的分布均呈自表向下逐渐降低的趋势,15 cm以下其含量基本保持稳定.土壤有机碳与全氮、碳氮比呈显著正相关,但全氮与碳氮比无显著相关性.     

盐城海滨湿地盐沼植被对土壤碳氮分布特征的影响

在盐城海滨湿地不同植被带下采集土壤样品,研究了土壤有机碳和全氮的空间分布特征,分析了盐沼植物对湿地土壤碳、氮分布的影响.结果表明：在盐城海滨湿地,表层土壤中有机碳和全氮含量分别介于1.71～7.92 g·kg^-1和0.17～0.36 g·kg^-1之间,变幅较大,不同植被带之间存在显著差异,且各植被带表层土壤中有机碳、全氮含量均高于光滩.垂直方向上,各植被带土壤中有机碳、全氮的分布均呈自表向下逐渐降低的趋势,15 cm以下其含量基本保持稳定.土壤有机碳与全氮、碳氮比呈显著正相关,但全氮与碳氮比无显著相关性.     

三江平原不同湿地类型土壤活性有机碳组分及含量差异

土壤活性有机碳对土壤干扰的反应较快,是土壤有机碳早期变化的敏感性指标。近50年来,三江平原湿地土壤有机碳库受农事活动影响较大。为了探讨不同湿地类型土壤活性有机碳主要组分土壤可溶性有机碳(Dissolved organic carbon,DOC)、微生物量碳(Microbial biomass carbon,MBC)和易氧化有机碳(Easily oxidized organic carbon,EOC)的分布差异及主要影响因子,选择了三江平原洪河自然保护区4种典型的湿地类型(小叶章+沼柳湿地、小叶章湿地、毛苔草湿地和芦苇湿地)为研究对象。分析了不同湿地类型土壤可溶性有机碳,微生物量碳和易氧化有机碳在0—30 cm土层内的分布特征和分配比例及其与有机碳、土壤养分和酶活性指标(蔗糖酶、纤维素酶和过氧化氢酶)之间的相关关系。结果表明:(1)4种湿地类型土壤DOC、MBC和EOC含量均随土层深度的增加而减少。不同湿地类型之间土壤活性有机碳含量在0—30 cm土层内存在显著性差异(P0.05),相对于长期淹水的毛苔草湿地和芦苇湿地而言,未淹水的小叶章+沼柳湿地和小叶章湿地具有较高的DOC,MBC和EOC含量。(2)土壤DOC、MBC和EOC占有机碳比例分别为0.27%—0.63%,1.27%—5.94%和19.63%—41.25%。土壤DOC所占比例呈先增后减的变化趋势,最大的比例均出现在10—20 cm。MBC所占比例在土壤剖面上则未表现出一致的变化规律,而EOC所占比例则随土层深度的增加而逐渐减少。(3)土壤DOC占SOC比例以小叶章湿地最高,MBC和EOC占SOC的比例则以小叶章+沼柳湿地最高。而长期淹水的毛苔草湿地和芦苇湿地则具有更低的DOC,MBC和EOC比例。(4)综合分析表明,4种湿地类型土壤DOC,MBC和EOC两两之间存在极显著相关性关系,它们除了与碳氮比相关性不显著外,与土壤有机碳,全氮,全磷养分和酶活性指标间相关性均达到极显著水平,尤其是与有机碳和全氮的相关性系数更高,此外DOC与纤维素酶,MBC与过氧化氢酶相关性更大。由此可见,土壤碳氮磷养分和酶活性是影响土壤活性有机碳组分分布的重要因素。     

干旱荒漠区不同灌木根际与非根际土壤氮素的含量特征

选取广泛分布于阿拉善干旱荒漠区的白刺、霸王、红砂、沙冬青、沙木蓼、梭梭和驼绒藜7种不同的旱生灌木,研究其根际与非根际土壤各种形态氮素、有机碳的含量特征及土壤pH的变化.结果表明,相对于非根际土壤,根际土壤全氮、铵态氮、硝态氮分别平均高24.9%、24.5%和65.1%,土壤有机碳平均高出18.5%,土壤pH值平均低0.14个单位.根际与非根际土壤的全氮、铵态氮、硝态氮、有机碳和pH之间都呈现出了极显著差异(p<0.01).7种灌木根际土壤全氮、硝态氮和有机碳含量均比非根际土壤含量高.除沙冬青根际铵态氮含量较非根际低以外,其余6种灌木根际土壤铵态氮含量均高于非根际土壤.梭梭的根际土壤pH高于非根际,其它6种灌木均是根际pH低于非根际土壤.在根际与非根际,土壤有机碳与土壤全氮之间均呈显著相关,二者表现为线性关系.而土壤全氮与铵态氮在根际与非根际则均无相关性,全氮与硝态氮在根际和非根际土壤均显著相关,且二者也呈线性相关.     

植物、土壤及土壤管理对土壤微生物群落结构的影响

土壤微生物是土壤生态系统的重要组成部分,对土壤微生物群落结构多样性的研究是近年来土壤生态学研究的热点。本文综述了有关植物、土壤类型以及土壤管理措施对土壤微生物群落结构影响的最新研究结果,指出植物的作用因植物群落结构多样性、植物种类、同种植物不同的基因型,甚至同一植物不同根的区域而异;而土壤的作用与土壤质地和有机质含量等因素有关;植物和土壤类型在对土壤微生物群落结构影响上的作用存在互作关系。不同的土壤管理措施对土壤微生物群落结构影响较大,长期连作、大量的外援化学物质的应用降低了土壤微生物的多样性;而施用有机肥、免耕可以增加土壤微生物群落结构多样性,有利于维持土壤生态系统的功能。     

Estimating respiration of roots in soil: Interactions with soil CO2, soil temperature and soil water content

Little information is available on the variability of the dynamics of the actual and observed root respiration rate in relation to abiotic factors. In this study, we describe I) interactions between soil CO₂ concentration, temperature, soil water content and root respiration, and II) the effect of short-term fluctuations of these three environmental factors on the relation between actual and observed root respiration rates. We designed an automated, open, gas-exchange system that allows continuous measurements on 12 chambers with intact roots in soil. By using three distinct chamber designs with each a different path for the air flow, we were able to measure root respiration over a 50-fold range of soil CO₂ concentrations (400 to 25000 ppm) and to separate the effect of irrigation on observed vs. actual root respiration rate. All respiration measurements were made on one-year-old citrus seedlings in sterilized sandy soil with minimal organic material.Root respiration was strongly affected by diurnal fluctuations in temperature (Q₁₀ = 2), which agrees well with the literature. In contrast to earlier findings for Douglas-fir (Qi et al., 1994), root respiration rates of citrus were not affected by soil CO₂ concentrations (400 to 25000 ppm CO₂; pH around 6). Soil CO₂ was strongly affected by soil water content but not by respiration measurements, unless the air flow for root respiration measurements was directed through the soil. The latter method of measuring root respiration reduced soil CO₂ concentration to that of incoming air. Irrigation caused a temporary reduction in CO₂ diffusion, decreasing the observed respiration rates obtained by techniques that depended on diffusion. This apparent drop in respiration rate did not occur if the air flow was directed through the soil. Our dynamic data are used to indicate the optimal method of measuring root respiration in soil, in relation to the objectives and limitations of the experimental conditions.     

生物质炭对水稻土团聚体微生物多样性的影响

生物质炭施用对土壤微生物群落结构的影响已有报道,但土壤团聚体粒组中微生物群落对生物质炭施用的响应的研究还相对不足。以施用玉米秸秆生物质炭两年后的水稻土为对象,采用团聚体湿筛法,通过高通量测序对土壤团聚体的微生物群落结构与多样性进行分析,结果表明:(1)与对照相比,生物质炭施用显著促进了大团聚体(2000—250μm)的形成,并提高了团聚体的稳定性。(2)不同粒径团聚体间微生物相对丰度存在显著差异。在未施生物质炭的处理(C0)中,随着团聚体粒径增大,变形菌门、子囊菌门、β-变形杆菌目、格孢腔菌目的相对丰度逐渐降低,而酸杆菌门、担子菌门、粘球菌目、类球囊霉目的相对丰度逐渐升高。(3)生物质炭施用显著改变了团聚体间的微生物群落结构。与C0处理相比,生物质炭施用处理的大团聚体中变形菌门、鞭毛菌门和β-变形杆菌目的相对丰度分别显著提高了14.37%、33.28%和33.82%;微团聚体(250—53μm)中酸杆菌门、子囊菌门和粘球菌目的相对丰度分别显著降低了20.15%、19.93%和17.66%;粉、黏粒组分(53μm)中担子菌门的相对丰度升高90.25%,而子囊菌门和鞭毛菌门的相对丰度分别降低12.15%和12.58%。由此可见,生物质炭不仅改变土壤团聚体组成和分布,同时伴随着土壤微生物群落结构的改变。     

Available soil nitrogen in relation to fractions of soil nitrogen and other soil properties

The available N of 27 soils from England and Wales was assessed from the amounts of N taken up over a 6-month period by perennial ryegrass grown in pots under uniform environmental conditions. Relationships between availability and the distribution of soil N amongst various fractions were then examined using multiple regression. The relationship: available soil N (mg kg^–1 dry soil)=(N_min×0.672)+(N_inc×0.840)+(N_mom×0.227)–5.12 was found to account for 91% of the variance in available soil N, where N_min=mineral N, N_inc=N mineralized on incubation and N_mom=N in macro-organic matter. The N mineralized on incubation appeared to be derived largely from sources other than the macro-organic matter because these two fractions were poorly correlated. When availability was expressed in terms of available organic N as % of soil organic N (N_ao) the closest relationship with other soil characteristics was: N_ao=[N_inc×(1.395–0.0347×CN_mom]+[N_mom×0.1416], where CN_mom=CN ratio of the macro-organic matter. This relationship accounted for 81% of the variance in the availability of the soil organic N.The conclusion that the macro-organic matter may contribute substantially to the available N was confirmed by a subsidiary experiment in which the macro-organic fraction was separated from about 20 kg of a grassland soil. The uptake of N by ryegrass was then assessed on two subsamples of this soil, one without the macro-organic matter and the other with this fraction returned: uptake was appreciably increased by the macro-organic matter.     

The porosity of soil aggregates from bulk soil and from soil adhering to roots

Summary Total porosity and pore-size distribution (p.s.d.) were determined in soil aggregates taken in plots planted with maize and treated with farmyard manure and three rates of compost. Soil aggregates were collected from the soil adherent to the maize roots (root soil aggregates) and from bulk soil (bulk soil aggregates). Mercury intrusion porosimetry was used to evaluate the total porosity and the p.s.d. Treatments did not affect the total porosity of the bulk soil aggregates. The same was observed for the root soil aggregates. However the total porosity of the root soil aggregates was always lower than that of the bulk soil aggregates. The loss of total porosity was found to be due to a decrease in the percentage of larger pores with respect to the total.     

Linking soil bacterial biodiversity and soil carbon stability

Native soil carbon (C) can be lost in response to fresh C inputs, a phenomenon observed for decades yet still not understood. Using dual-stable isotope probing, we show that changes in the diversity and composition of two functional bacterial groups occur with this ‘priming'' effect. A single-substrate pulse suppressed native soil C loss and reduced bacterial diversity, whereas repeated substrate pulses stimulated native soil C loss and increased diversity. Increased diversity after repeated C amendments contrasts with resource competition theory, and may be explained by increased predation as evidenced by a decrease in bacterial 16S rRNA gene copies. Our results suggest that biodiversity and composition of the soil microbial community change in concert with its functioning, with consequences for native soil C stability.Substrate inputs can stimulate decomposition of native soil organic carbon (SOC; Kuzyakov et al., 2000), a phenomenon known as the ‘priming effect'' (Kuzyakov, 2010), and is considered large enough to influence ecosystem C balance (Wieder et al., 2013). Two functionally distinct groups of microorganisms are postulated to mediate priming: one that grows rapidly utilizing labile C, and one that grows slowly, breaking down recalcitrant SOC (Fontaine et al., 2003; Blagodatskaya et al., 2007). However, distinguishing these groups is technically challenging. Here, we used dual-stable isotope probing with ¹³C-glucose and ¹⁸O-water to identify bacteria in these two groups growing in response to single and repeated pulses of glucose. Organisms that utilize labile C for growth assimilate both ¹³C-glucose and ¹⁸O-water into their DNA, whereas organisms that grow using SOC incorporate only ¹⁸O-water. Differential isotope incorporation leads to a range of DNA densities separable through isopycnic centrifugation, which can then be characterized by sequencing (Radajewski et al., 2000).We sequenced fragments of bacterial 16S rRNA genes following single and repeated glucose pulses. We hypothesized that the single pulse of labile C would stimulate growth of opportunistic organisms, thus immobilizing nutrients and suppressing growth and diversity of the SOC-utilizing community, decreasing SOC decomposition (negative priming), a response analogous to that observed in plant communities in response to chronic N additions (Tilman, 1987; Clark and Tilman, 2008). We hypothesized that multiple glucose additions would stimulate growth of a more diverse bacterial community, including more native SOC-utilizing organisms that possess enzymes to decompose recalcitrant compounds, causing positive priming (Fontaine et al., 2003; Kuzyakov, 2010).Soil from a ponderosa pine ecosystem was amended weekly for 7 weeks with 500 μg C-glucose per gram soil (2.65 atom % ¹³C) in 100 μl deionized water or with 100 μl deionized water (n=5). Measurements of δ¹³C–CO₂ and [CO₂] enabled the partitioning of CO₂ into that derived from added glucose or from native SOC (C_SOC):where C_total is CO₂–C from glucose-amended samples, δ_total is the δ¹³C–CO₂ from glucose-amended samples, δ_glucose is the δ¹³C of the added glucose and δ_SOC is the δ¹³C–CO₂ evolved from the non-amended samples. Priming was calculated as the difference between SOC oxidation of the amended and non-amended samples. With this approach, any evolved CO₂ carrying the ¹³C signature of the added glucose is considered respiration of glucose, including ¹³C-labeled biomass and metabolites derived from prior glucose additions. Thus, this approach quantifies priming as the oxidation of SOC present at the beginning of the experiment, consistent with many other studies of priming (Cheng et al., 2003; De Graaff et al., 2010).In a parallel incubation for dual-stable isotope probing, the repeated-pulse samples received unlabeled glucose (500 μg C-glucose per gram soil) for 6 weeks while the non-amended and single-pulse samples received sterile deionized water. In week 7, samples received one of four isotope treatments (n=3): 97 atom % H₂ ¹⁸O (non-amended soil), 99 atom % ¹³C-glucose and 97 atom % H₂ ¹⁸O (single- and repeated-pulse soil), ¹²C-glucose and 97 atom % H₂ ¹⁸O (repeated-pulse soil) or ¹²C-glucose and H₂ ¹⁶O (repeated-pulse soil). After incubating for 7 days, soil was frozen at −40 °C. DNA was extracted, separated through isopycnic centrifugation, and two density ranges were sequenced for the bacterial 16S rRNA gene (Supplementary Figure 1): 1.731–1.746 g ml⁻¹ (hereafter called the SOC-utilizing community) and 1.759–1.774 g ml⁻¹ (hereafter called the glucose-utilizing community).Amplicons of the V3–V6 16S rRNA region were bar coded with broad-coverage fusion PCR primers and pooled before sequencing on a Genome Sequencer FLX instrument. These sequence data have been submitted to the GenBank database under accession number SRP043371. Data were checked for chimeras (Edgar et al., 2011), demultiplexed and quality checked (Caporaso et al., 2010). Taxonomy was assigned to genus at the ⩾80% bootstrap confidence level (Cole et al., 2009).We used the Shannon''s diversity index (H′), commonly used in microbial systems (Fierer and Jackson, 2006), to assess changes in microbial diversity. Analysis of variance was used to compare the amount of DNA within densities between isotope treatments (Supplementary Figure 2) and to test the effects of the treatments on the Shannon''s diversity (Figure 2) and Pielou''s evenness (Supplementary Figure 3) of the active bacterial communities, with post hoc Student''s t-tests, α=0.05. PRIMER 6 and PERMANOVA were used to create the nonmetric multidimensional scaling ordination and to compare bacterial communities between glucose treatments and the two sequenced density ranges.The single pulse of glucose suppressed SOC oxidation, whereas repeated pulses increased SOC oxidation (Figure 1). Few experiments to date have examined priming in response to repeated substrate amendments (Hamer and Marschner, 2005; Qiao et al., 2014), even though in nature soil receives repeated substrate pulses from litterfall and rhizodeposition. Our results demonstrate the dynamic response of SOC decomposition to repeated labile C inputs.Open in a separate windowFigure 1Weekly priming rates calculated as the difference in SOC respired between glucose-amended and non-amended soil (n=5).Dual-stable isotope probing was able to separate the growing bacteria into two groups with distinct DNA densities (P<0.001, PERMANOVA; Figure 3a), indicating differential uptake of ¹³C-glucose and ¹⁸O-water. In response to the initial glucose addition, the diversity of the growing glucose- and SOC-utilizing bacterial communities declined compared with the non-amended community (P<0.001, t-tests; Figure 2), driven by a strong decrease in evenness (Supplementary Figure 3). In the SOC-utilizing community, where DNA was labeled with ¹⁸O only, the relative abundance of Bacillus increased 4.9-fold compared with the non-amended control to constitute 31.6% of the community (Figure 3b). Bacillus survives well under low-nutrient conditions (Panikov, 1995), and is able to synthesize a suite of extracellular enzymes capable of degrading complex substrates (Priest, 1977), traits that are conducive for using SOC for growth. In the glucose-utilizing community, where DNA was labeled with both ¹³C and ¹⁸O, Arthrobacter increased 67.7-fold relative to the non-amended control to constitute 75.5% of the growing bacteria (Figure 3b). In culture experiments, Arthrobacter can rapidly take up and store glucose for later use (Panikov, 1995) and here we find it dominating the high-density DNA fractions, signifying that it is using the labeled glucose to grow. The increased biomass of Arthrobacter may have resulted in greater resource competition, thus reducing the diversity of the growing community, as is frequently found in plant communities (Bakelaar and Odum, 1978; Clark and Tilman, 2008).Open in a separate windowFigure 2Shannon''s diversity index (H′) of the non-amended, single-pulse, and repeated-pulse treatments (n=3) in the SOC- (mid-density) and glucose-utilizing (high-density) communities. Treatments with the same letter are not significantly different from each other (Student''s t, α=0.05).Open in a separate windowFigure 3(a) Nonmetric multidimensional scaling ordination showing differences in growing bacterial communities at the genus taxonomic level in the SOC-utilizing (mid-density; open symbols) and glucose-utilizing (high-density; closed symbols) groups of non-amended (Δ), single-pulse (○) and repeated-pulse (□) treatments (n=3). (b) Pie charts of genera in the SOC- and glucose-utilizing communities of the single- and repeated-pulse treatments (n=3). Genera with relative abundances >5% are listed in the figure legend.After repeated glucose amendments, the diversity of the growing community recovered to non-amendment levels (Figure 2) without strongly dominant organisms (Figure 3b and Supplementary Figure 3). The higher diversity found after repeated glucose pulses may be explained by trophic interactions where predators graze on prey populations that have been enlarged by resource addition, suppressing competition between prey species and causing secondary mobilization of nutrients (Clarholm, 1985). The decrease in total bacterial 16S rRNA gene copies in the repeated-pulse—compared with the single-pulse—treatment (Supplementary Figure 4) supports predation as a potential mechanism explaining the observed diversity increase after repeated glucose pulses.The recovery of diversity after repeated glucose pulses contrasts with resource competition theory (Tilman, 1987). When chronic additions of a limiting resource are applied, species diversity and evenness typically decrease (Bakelaar and Odum, 1978; Clark and Tilman, 2008) because competitive organisms become dominant. We observed this after the single glucose pulse, but not after repeated pulses. This diversity response may be the result of community shifts facilitated by short bacterial life cycles and the tens to hundreds of generations expected during the 7-week incubation (Behera and Wagner, 1974). In contrast, systems on which most ecological theory is based (for example, plants) might achieve perhaps 20 generations in a multi-decadal field experiment (Bakelaar and Odum, 1978; Clark and Tilman, 2008). With more generations, more community dynamics can occur, including increased resource cascades in which extracellular enzymes, metabolites or lysed cells of one functional group increase substrates for another (Blagodatskaya and Kuzyakov, 2008). Our results highlight the opportunity to test ecological theories in microbial ecosystems (Prosser et al., 2007), particularly as the short life cycles of microbes makes them well suited for pursuing ecological questions in an evolutionary framework (Jessup et al., 2004).The priming effect is ubiquitous, yet its drivers remain elusive. Our results suggest that changes in the diversity and composition of the growing bacterial community contribute to priming, and thus that ecosystem properties such as soil C storage may be sensitive to soil microbial biodiversity.     

耕作方式对潮土土壤团聚体微生物群落结构的影响

为探究不同耕作方式对潮土土壤团聚体微生物群落结构和多样性的影响,采用磷脂脂肪酸(PLFA)法测定了土壤团聚体中微生物群落。试验设置4个耕作处理,分别为旋耕+秸秆还田(RT)、深耕+秸秆还田(DP)、深松+秸秆还田(SS)和免耕+秸秆还田(NT)。结果表明:与RT相比,DP处理显著提高了原状土壤和>5 mm粒级土壤团聚体中真菌PLFAs量和真菌/细菌,为真菌的繁殖提供了有利条件,有助于土壤有机质的贮存,提高了土壤生态系统的缓冲能力;提高了5～2 mm粒级土壤团聚体中细菌PLFAs量,降低了土壤革兰氏阳性菌/革兰氏阴性菌,改善了土壤营养状况;提高了<0.25 mm粒级土壤团聚体中微生物丰富度指数。总的来说,深耕+秸秆还田(DP)对土壤团聚体细菌和真菌生物量有一定的提高作用,并且在一定程度上改善了土壤团聚体微生物群落结构,有利于增加土壤固碳能力和保持土壤微生物多样性。冗余分析结果表明,土壤团聚体总PLFAs量、细菌、革兰氏阴性菌和放线菌PLFAs量与土壤有机碳相关性较强,革兰氏阳性菌PLFAs量与总氮相关性较强。各处理较大粒级土壤团聚体微生物群落主要受碳氮比、含水量、pH值和团聚体质量分数的影响,较小粒级土壤团聚体微生物群落则主要受土壤有机碳和总氮的影响。     

酸性硫酸盐土水改旱后土壤化学性状的变异初报

探讨了酸性硫酸盐水稻土改为旱作后土壤化学性状的变异以及比较不同利用方式之间的经济效益．结果表明,酸性硫酸盐水稻土改种甜玉米和蔬菜后,土壤化学性状发生显著变化．耕层土壤酸度、水溶性硫酸根含量、土壤活性铝和活性铁含量均显著降低．经济效益得到显著提高．建议对水改旱后的环境效应进行深入研究以及进行定位观测,以便合理利用这一特殊的土壤资源     

Effect of soil moisture on bioremediation of chlorophenol-contaminated soil

A chlorophenol-contaminated soil was tested for the biodegradability in a semi-pilot scale microcosm using indigenous microorganisms. More than 90% of 4-chlorophenol and 2,4,6-trichlorophenol, initially at 30 mg kg^–1, were removed within 60 days and 30 mg pentachlorophenol kg^–1 was completely degraded within 140 days. The chlorophenols were degraded more effectively under aerobic condition than under anaerobic condition. Soil moisture had a significant effect with the slowest degradation rate of chlorophenols at 25% in the range of 10–40% moisture content. At 25–40%, the rate of chlorophenol degradation was directly related to the soil moisture content, whereas at 10–25%, it was inversely related. Limited oxygen availability through soil agglomeration at 25% moisture content might decrease the degradation rate of chlorophenols.     

Carbon input to soil may decrease soil carbon content

It is commonly predicted that the intensity of primary production and soil carbon (C) content are positively linked. Paradoxically, many long‐term field observations show that although plant litter is incorporated to soil in large quantities, soil C content does not necessarily increase. These results suggest that a negative relationship between C input and soil C conservation exists. Here, we demonstrate in controlled conditions that the supply of fresh C may accelerate the decomposition of soil C and induce a negative C balance. We show that soil C losses increase when soil microbes are nutrient limited. Results highlight the need for a better understanding of microbial mechanisms involved in the complex relationship between C input and soil C sequestration. We conclude that energy available to soil microbes and microbial competition are important determinants of soil C decomposition.