脱硫弧菌SRB7对重金属铬Cr(VI)还原特性

利用化工厂污泥废水中分离到的一株耐酸脱硫弧菌(Desulfovibrio SRB7),对不同pH,温度、碳源、菌废比等条件下SRB7还原Cr(VI)能力进行研究.并从H2S还原途径、电子传递途径以及胞外聚合物(EPS)吸附途径研究SRB7菌体整体去除Cr(VI)的特性.结果表明:当Cr(VI)起始浓度为50 mg/L时,pH 7.5,培养温度36℃,碳源为乳酸钠,混合菌液和Cr(VI)溶液的菌废比为1:5(V/V)能获得很好的还原效果.在SRB7去除Cr(VI)的特性中,吸附途径对Cr(VI)的去除几乎不起作用;电子传递途径在Cr(VI)的还原过程中不占优势,24 h去除率为51.42%;而H2S途径在Cr(VI)的还原过程中占主导地位,24 h去除率为78.02%.     

一株李氏禾内生细菌去除Cr(Ⅵ)的特性

李氏禾(Leersia hexandra)是中国境内发现的第一种铬超积累植物,该文对李氏禾内生菌及其除铬性能进行了研究。采用添加Cr(VI)的牛肉膏蛋白胨固体平板培养方法,从李氏禾根部分离筛选获得一株具有较强Cr(VI)抗性的内生细菌G04,分子生物学鉴定结果表明该菌株属于阴沟肠杆菌(Enterobacter cloacae)。采用摇瓶培养方法,以Cr(VI)去除率、总Cr(铬)的去除率以及菌体生物量为指标,考察了pH、温度、底物浓度、装液量、接种量、摇床转速以及反应时间等因素对Cr(VI)去除率、总铬去除率和菌株生长的影响。结果表明:在牛肉膏蛋白胨液体培养基中,菌株E. cloacae G04去除Cr(VI)的较优反应条件为初始pH5. 0、温度37℃、Cr(VI)浓度为100 mg·L~(-1)、装液量80 mL(250 mL三角瓶)、接种量15%、摇床转速为120r·min~(-1)、反应时间48 h。在此条件下,菌株E. cloacae G04对Cr(VI)和总铬的去除率分别为84%和8%。根据Cr(VI)去除率和总铬去除率的结果推测该菌株去除Cr(VI)的机制可能是以还原为主、吸附为辅。这表明李氏禾内生细菌E. cloacae G04菌株具有较好的应用潜力,既有可能直接用于土壤、水环境铬污染的修复,也有可能作为促植物修复铬污染的后备菌株,另外可为深入研究李氏禾的铬积累作用机制提供参考。     

絮凝酵母吸附Cr(VI)的机理

絮凝酵母SPSC01为酿酒酵母Saccharomyces cerevisiae和粟酒裂殖酵母Schizosaccharomyces pombe的融合菌株,用其吸附水溶液中的重金属Cr(VI),可以大大降低生物吸附的固液分离成本。为了探讨SPSC01菌体絮凝蛋白对Cr(VI)还原吸附的影响,对SPSC01与其亲本菌株的吸附行为进行了比较。结果表明,SPSC01和其具有絮凝性状的亲本S.pombe的Cr(VI)去除速率基本同步,远优于无絮凝性状的亲本S.cerevisiae;达到吸附平衡时,S.pombe、SPSC01和S.cerevisiae对总Cr去除率分别达68.8%、48.6%和37.5%;从而证明了絮凝有利于Cr(VI)的还原、吸附,絮凝蛋白在Cr(VI)的还原吸附过程中起促进作用。通过化学屏蔽方法和傅立叶变换红外光谱(FTIR)分析,对SPSC01菌体表面吸附Cr(VI)的机理进行了研究,结果表明SPSC01菌体表面吸附Cr(VI)起主要作用的基团是氨基、羧基和酰胺基。     

絮凝酵母吸附Cr(VI) 的机理

絮凝酵母SPSC01为酿酒酵母Saccharomyces cerevisiae和粟酒裂殖酵母Schizosaccharomyces pombe的融合菌株,用其吸附水溶液中的重金属Cr(VI),可以大大降低生物吸附的固液分离成本。为了探讨SPSC01菌体絮凝蛋白对Cr(VI) 还原吸附的影响,对SPSC01与其亲本菌株的吸附行为进行了比较。结果表明,SPSC01和其具有絮凝性状的亲本S. pombe的Cr(VI) 去除速率基本同步,远优于无絮凝性状的亲本S. cerevisiae;达到吸附平衡时,S. pombe、SPSC01和S. cerevisiae对总Cr去除率分别达68.8％、48.6％和37.5％;从而证明了絮凝有利于Cr(VI) 的还原、吸附,絮凝蛋白在Cr(VI) 的还原吸附过程中起促进作用。通过化学屏蔽方法和傅立叶变换红外光谱 (FTIR) 分析,对SPSC01菌体表面吸附Cr(VI) 的机理进行了研究,结果表明SPSC01菌体表面吸附Cr(VI) 起主要作用的基团是氨基、羧基和酰胺基。     

隐藏嗜酸菌Acidiphilium cryptum XTS的Cr(VI)还原特性及相关基因的差异表达

【目的】考察p H值、初始Cr（VI）浓度、Fe（III）的加入及氧气含量对隐藏嗜酸菌Acidiphilium cryptum XTS还原Cr（VI）的影响及其六价铬还原相关基因在不同培养条件下的差异表达。【方法】采用正交试验法L9（34）优选Cr（VI）还原最适条件;根据模式菌A.cryptum JF-5同源功能基因序列设计引物,对菌株XTS中的六价铬还原相关基因Acry₂099在不同培养条件下的基因差异表达进行分析。【结果】p H为2.9,初始Cr（VI）浓度为80 mg/L,Fe（III）浓度为100 mg/L的条件是该菌株还原Cr（VI）的最优化配合比,在该条件下处理24 h,Cr（VI）的还原率达到67.48%;从菌株XTS中成功克隆了Acry₂099基因,其序列与模式菌A.cryptum JF-5的同源功能基因序列一致性达到了99.7%;在不同p H值、初始Cr（VI）浓度及氧气含量下Acry₂099基因表达上调情况与Cr（VI）还原速率呈一致趋势,证明Acry₂099很可能参与还原Cr（VI）的代谢途径。虽然加入Fe（III）能促进Cr（VI）的还原,但是铁的加入对Acry₂099基因表达水平没有显著的影响。【结论】A.cryptum XTS对Cr（VI）的还原与p H值、初始Cr（VI）浓度、Fe（III）的存在等因素有关,较低的p H和较高的初始Cr（VI）浓度对该菌还原Cr（VI）具有促进作用。     

SRB-生物硫铁复合材料对废弃煤矿地下水的修复研究

酸性矿山废水（AMD）中含有高浓度的硫酸盐和金属离子，对矿山生态环境造成了严重的危害。硫酸盐还原菌（SRB）可以将SO42-还原为S2-，沉淀金属离子，并生成生物硫铁，其处理效率较高。文章利用农业废弃物秸秆制备SRB的缓释碳源，考察了不同形式的碳源条件下SRB对酸性矿山废水特征污染组分的处理效果，并结合SRB原位生成的生物硫铁包覆颗粒，制备得到SRB-生物硫铁复合材料，通过批量实验和动态柱实验考查SRB-生物硫铁复合材料对高浓度模拟废水和实际矿井水的处理效果。结果显示：在pH为5.5时，将秸秆渣作为游离SRB的碳源是可行的，但与秸秆渣相比，秸秆生物炭的处理效率明显更高，将秸秆生物炭与乳酸钠结合制备的SRB碳源，激活SRB的时间更短，12 h内对SO42-和Fe2+的去除率分别达到了59.25%和79.56%。在此实验范围内，随着生物炭投加量的增大，去除效率逐渐提高，在p H为4.5～6.5的范围内，体系初始p H对SRB反应体系的处理效果影响不大。SRB-碳源与生物硫铁包覆颗粒结合后对高浓度的SO42-和Fe2+模拟废水能保持高效且持久的反应活性。动态柱实验表明SRB-生物炭-生物硫铁...     

新型异养硝化-好氧反硝化菌Paracoccus sp. QD-19的分离及脱氮特性研究

从沈阳市南部污水处理厂活性污泥中分离获得同时具备异养硝化和好氧反硝化能力的新型菌株,研究其脱氮特性,为改善污水厂的脱氮处理工艺奠定基础。对菌株进行形态学观察和16S rRNA基因鉴定;分别以NH₄Cl、NaNO₂、KNO₃为唯一氮源探究菌株的脱氮能力;以碳源、C/N比、pH值、温度、转速、接种量(V∶V)等因素对菌株脱氮效果的影响进行研究。获得一株新型异养硝化-好氧反硝化菌株,经16S rRNA基因序列比对为副球菌属(Paracoccus),命名为Paracoccus sp. QD-19。菌株对初始氨氮浓度在300 mg/L以下的低浓度氨氮去除率能够达到100%,去除速率为8.707 mg/(L·h)且在脱氮过程中几乎没有亚硝态氮和硝态氮的积累。以亚硝态氮和硝态氮作为唯一氮源时,对此两种氮源的去除率36 h内均能达到99%,去除速率分别为4.944和5.666mg/(L·h)。确定了去除氨氮的最佳脱氮条件：琥珀酸钠为碳源,C/N比为10,pH值为7,接种量(V:V)为1%,温度为30℃,转速为140 r/min。菌株Pa...     

Cr(VI)还原菌的筛选、鉴定及其还原物质分析

【背景】铬污染土壤是我国土壤污染修复的重点治理对象,在众多修复技术中,微生物法因具有简单、经济、无二次污染等特性已成为研究热点,而微生物法中筛选出既能适应污染场地环境又能高效还原Cr(VI)的菌株尤为重要。【目的】筛选适应西北寒旱区高效还原Cr(VI)的菌株,丰富铬还原菌资源库,为铬污染土壤修复奠定基础。【方法】采用富集驯化、分离纯化法进行筛菌;通过形态学和分子生物学相结合的方法对目的菌株进行鉴定;采用傅里叶变换红外光谱法对还原机理进行研究。【结果】菌株G-13有较强的Cr(VI)还原能力,pH 9.0、温度为30°C条件下,60 h对Cr(VI)(100 mg/L)的还原率达到82.8%。经形态学和分子生物学鉴定,菌株G-13为Micrococcus luteus。反应中Cr(VI)的降低伴随着Cr(III)的增加,说明以还原反应为主,并且还原能力与细菌生长呈依赖型关系。对细胞各组分及变性研究表明,胞外酶在还原反应中占主要作用。除Pd~(2+)、Cd~(2+)外,其余金属离子对酶活性无明显抑制作用。通过傅里叶变换红外光谱分析,发现G-13与Cr(VI)结合位点主要为羟基、羰基、羧基、–CH、酰胺基等。【结论】菌株G-13有较强的Cr(VI)还原能力,能为西北寒旱区铬污染土壤修复丰富菌种资源。     

沼泽红假单胞菌去除镉的研究

研究了沼泽红假单胞菌(Rhodopseudomonas palustris)S菌株的生长、Cd2 的去除与供氧光照、碳源、pH及温度的关系。结果表明:在好氧黑暗、苹果酸为碳源、pH7.0和30℃条件下,S菌株对初始浓度为25mg/L的Cd2 去除率最大,达到85%。在最佳条件下,Cd2 初始浓度为10mg/L~25mg/L时,去除率达85%,Cd2 浓度增加到150mg/L时,去除率仅为23%。测定Cd2 在菌体不同部位的分布发现菌体中富集的Cd2 63.5%在细胞壁上,33.5%在细胞原生质体内。同时,结合该菌体细胞超薄切片透射电镜观察证明了S菌株对Cd2 的去除主要在细胞壁上。     

青霉吸附水体重金属铬条件与特性研究

目的:研究青霉(Penicillium lh-1)作为吸附剂去除水体中六价铬的吸附条件与吸附特性.方法:菌种摇瓶培养收获茵体,干燥粉碎分选,添加吸附剂到体积100ml浓度50mg/L六价铬溶液中,对最优吸附温度、pH、共存离子以及铬被吸附形式进行研究.结果:①温度28℃以及酸性环境(pH 3)为最优吸附条件,10 h内,Cr(Ⅵ)的生物吸附去除效率达99%.②铬的生物吸附主要以六价形式,约占80%,部分Cr(Ⅵ)被还原成Cr(Ⅲ),约占20%.③溶液中共存离子对六价铬吸附的影响不同,一价阴离子与Cu2+对Cr(Ⅵ)的吸附几乎没有影响,二价阴离子和Ni2+的存在却明显地影响了生物吸附剂对Cr(Ⅵ)的吸附.结论环境温度、溶液pH以及溶液中共存离子对铬的生物吸附有显著的影响.     

Allelopathy and plant invasions: traditional,congeneric, and bio-geographical approaches

A relatively small subset of exotic plant species competitively exclude their neighbors in invaded “recipient” communities but coexist with neighbors in their native habitat. Allelopathy has been argued as one of the mechanisms by which such exotics may become successful invaders. Three approaches have been used to examine allelopathy as a mechanism for invasion. The traditional approach examines exotic invasives in the same way that other native plants also suspected of allelopathic activities are studied. In this approach dose, fate, and replenishment of chemicals can provide powerful evidence for allelopathic processes. The bio-geographical approach often does not provide as much mechanistic evidence for allelopathy, but comparing the allelopathic effects of exotic invasives on species from their native and invaded communities yields stronger evidence than the traditional approach for whether or not allelopathy actually contributes to invasive success. The congeneric, or phylogenetic, approach involves comparative studies of exotic species with natives in the same genus or that are as closely related as possible. Congeneric approaches are limited in inference and have been used to study the role of natural enemies in exotic invasion, but this approach has not been widely used to study allelopathy and invasion. We discuss these three approaches and present a data set for congeneric Lantana and Prosopis to illustrate how the congeneric approach can be used, and use Centaurea maculosa and (±)-catechin to demonstrate experimentally how traditional and bio-geographic approaches can be integrated to shed light on allelopathy in exotic plant invasions.     

Classification of meadow vegetation in the USSR

The scientific classification of meadow vegetation (mesophilous grasslands) was already available in the 1930's due to A. P. Shennikov who suggested to apply new classification principles, on the basis of species dominance. This classification became subjected to criticism, as the criteria proposed did not correspond to the nature of the classification object and as meadow community dominants were instable. In 1971 the Soviet phytocenology was influenced by the ideas of the Braun-Blanquet classification, but before completely adopting it, the Soviet geobotanists employed the so-called dominant-determinant principles of classification, when differential species and dominants were simultaneously used for association determination. In the seventies phytocenoses on the floristic basis, were used though their syntaxonomic analysis was not performed. In 1981, the All-Union conference on vegetation classification was held in Ufa. This conference gave careful consideration to the problem of the floristic classification in the USSR, stated that impressive progress had been achieved in meadow classification on the floristic basis and recommended to use more strict principles for phytocenosis determination alongside with syntaxonomic analysis and subordination of the existing higher syntaxons of the Braun-Blanquet system. The perspectives for implementation of the Braun-Blanquet principles in the USSR are elucidated and a tentative question is raised on the necessity to develop some new classes in order to reflect the specific character of the meadows in the USSR.     

Assessment of the uncertainty of trace metal and nitrogen concentrations in mosses due to sampling,sample preparation and chemical analysis based on the French contribution to ICP-Vegetation

Moss bio-monitoring is a convenient tool for establishing specific or large-scale exposure to atmospheric trace metals and nitrogen pollution. However, the uncertainty associated with sampling, sample preparation and chemical analysis of bio-monitors has been poorly documented, with the exception of one study dealing with lichens; thus, the uncertainty associated with moss bio-monitoring has never been assessed. Here, we propose following the Eurachem guidelines to determine the uncertainties associated with the concentrations of elements measured in mosses during the sampling survey across France in 2011. In addition, we assess the analytical method used in four surveys from 1996 to 2011. Uncertainties were expressed as linear functions of the element concentrations, with minimum and maximum slopes of 14 and 61%, corresponding to nitrogen and chromium, and a median of 32%. Although the data reveal that some steps of the protocol should be performed carefully, they also indicate that the protocol was executed properly and is reproducible. The chemical analyses contribute to a small proportion of the uncertainty associated with the protocol, except for the analysis of chromium. The sampling period, and intra-site variability largely contribute to this uncertainty. The moss species did not introduce additional uncertainty. This integrative assessment of measurement uncertainty will help improve the protocol for future surveys. Such studies could be useful for developing a standard operating procedure and could be used to improve comparisons between countries and to identify temporal trends across Europe.     

不同治疗方案治疗脊柱结核的效果对比

目的:分析不同脊柱结核手术方式在治疗效果和治疗安全性方面的差异。方法:将我院脊柱外科施以手术治疗的89例脊柱结核患者为研究对象,根据手术方法差异分成后路组45例和前路组44例,记录手术评价指标、Cobb角、手术前后美国脊髓损伤学会神经功能(ASIA评分)变化和术后并发症,并对记录结果行统计分析。结果:后路组手术时间(185.71±21.89)min、出血量(503.12±57.81)m L、出院时间(21.43±3.52)d、手术相关不良反应率(6.82%)、Cobb角度(18.34±8.41)°显著低于前路组,而后路组神经损伤治愈率(54.55%)高于前路组,P0.05,存在统计学差异。结论:手术入路能够影响脊柱结核手术的治疗效果,与前入路手术相比,后入路手术在手术简便性、安全性、有效性方面优势明显。     

Candidate gene identification approach: progress and challenges

Although it has been widely applied in identification of genes responsible for biomedically, economically, or even evolutionarily important complex and quantitative traits, traditional candidate gene approach is largely limited by its reliance on the priori knowledge about the physiological, biochemical or functional aspects of possible candidates. Such limitation results in a fatal information bottleneck, which has apparently become an obstacle for further applications of traditional candidate gene approach on many occasions. While the identification of candidate genes involved in genetic traits of specific interest remains a challenge, significant progress in this subject has been achieved in the last few years. Several strategies have been developed, or being developed, to break the barrier of information bottleneck. Recently, being a new developing method of candidate gene approach, digital candidate gene approach (DigiCGA) has emerged and been primarily applied to identify potential candidate genes in some studies. This review summarizes the progress, application software, online tools, and challenges related to this approach.     

An intelligent approach to the discovery of luminescent materials using a combinatorial approach combined with Taguchi methodology

A significant advance made in combinatorial approach research was that the emphasis shifted from simple mixing to intelligent screening, so as to improve the efficiency and accuracy of discovering new materials from a larger number of diverse compositions. In this study, the long‐lasting luminescence of SrAl₂O₄, which is co‐doped with Eu²⁺, Ce³⁺, Dy³⁺, Li⁺ and H₃BO₃, was investigated based on a combinatorial approach in conjunction with the Taguchi method. The minimal number of 16 samples to be tested (five dopants and four levels of concentration) were designed using the Taguchi method. The samples to be screened were synthesized using a parallel combinatorial strategy based on ink‐jetting of precursors into an array of micro‐reactor wells. The relative brightness of luminescence of the different phosphors over a particular period was assessed. Ce³⁺ was identified as the constituent that detrimentally affected long‐lasting luminescence. Its concentration was optimized to zero. Li⁺ had a minor effect on long‐lasting luminescence but the main factors that contributed to the objective property (long‐lasting luminescence) were Eu²⁺, Dy³⁺ and H₃BO₃, and the concentrations of these dopants were optimized to 0.020, 0.030 and 0.300, respectively, for co‐doping into SrAl₂O₄. This study demonstrates that the utility of the combinatorial approach for evaluating the effect of components on an objective property (e.g. phosphorescence) and estimating the expected performance under the optimal conditions can be improved by the Taguchi method. Copyright © 2011 John Wiley & Sons, Ltd.     

A text mining approach to detect mentions of protein glycosylation in biomedical text

Protein Glycosylation is an important post translational event that plays a pivotal role in protein folding and protein is trafficking. We describe a dictionary based and a rule based approach to mine ‘mentions‘ of protein glycosylation in text. The dictionary based approach relies on a set of manually curated dictionaries specially constructed to address this task. Abstracts are then screened for the ‘mentions‘ of words from these dictionaries which are further scored followed by classification on the basis of a threshold. The rule based approaches also relies on the words in the dictionary to arrive at the features which are used for classification. The performance of the system using both the approaches has been evaluated using a manually curated corpus of 3133 abstracts. The evaluation suggests that the performance of the Rule based approach supersedes that of the Dictionary based approach.     

中国农业野生植物原生境保护实践与未来研究方向

农业野生植物原生境保护已成为国内外生物多样性保护热点。截止2011年底,我国利用物理隔离和主流化两种保护方法已建成各类农业野生植物原生境保护点226个,保护物种52个,分布于27个省(自治区、直辖市),其中物理隔离保护点154个,保护物种39个,分布于27个省(自治区、直辖市),主流化保护点72个,保护物种31个,分布于15个省(自治区、直辖市)。本文通过对我国已建成的农业野生植物原生境保护点的调查和分析,比较了物理隔离和主流化两种保护方法的优缺点,总结了两种保护方法建设农业野生植物原生境保护点的经验和存在的主要问题,提出了解决这些问题的思路与对策。在此基础上,结合国际上生物多样性保护的发展趋势,探讨了我国未来农业野生植物原生境保护的发展方向和关键措施。     

胫骨髓内钉入路治疗胫骨干骨折的临床进展

胫骨干骨折是最常见的长骨骨折,对于不稳定的胫骨骨折,胫骨髓内钉因其独特的优势逐渐成为首选治疗方式。当前对于胫骨干髓内钉入路主要分为髌骨上入路和髌骨下入路。髌骨上入路放置髓内钉时,患肢半伸直位有利于胫骨干骨折的复位与固定,但可能会造成髌骨关节面损伤。髌骨下入路患肢屈曲位可能会造成胫骨干复位的丢失,进而影响患者的预后。因此,胫骨髓内钉置入不同入路可能造成不同临床结局,会对临床结局造成不同的影响。目前对于胫骨髓内钉最佳入路仍然存在争议,针对最近发表的相关文献我们对胫骨髓内钉入路及其优缺点进行讨论综述。