Genetic evidence for linkage with the Z and W sex chromosomes of two distinct couples of alleles controlling larval and postmetamorphic skin pigmentation in salamander

In Pleurodeles waltl, progeny resulting from a cross between 2 individuals of the Z/W sexual genotype include 25% of W/W individuals, while those issued from crossing a Z/W neomale with a W/W thelygenous female include 50% of W/W individuals. W/W individuals can be identified through the peptidase-1 zymogram since, in P. waltl, this enzyme is controlled by codominant alleles which are linked to the sex chromosomes. In such progeny, we discovered 2 mutant phenotypes affecting larval and postmetamorphic skin pigmentation in W/W individuals. These phenotypes are described herein. The study of their inheritance in several offspring provides evidence that they are controlled by 2 distinct genes, the recessive mutant alleles of which are linked to the W sex chromosome; moreover, in thelygenous W/W females, the differential segment does not prevent the occurrence of meiotic recombinations between W sex chromosomes. Mutant skin pigmentary phenotypes are easily identified and constitute a tool for rapid, efficient selection of individuals of the W/W sexual genotype.     

肠道微生物对寿命的影响及其机制*

延长健康寿命的跨度对每个人都有重要意义,百岁老人存在独特的肠道菌群特征,肠道微生物群是许多年龄相关变化的核心,菌群特征以及菌群基因组成改变都能影响机体寿命。一些饮食和药物要发挥延寿效果也离不开微生物的参与,微生物具有重要的介导和转化作用,益生菌和粪便移植等措施在动物模型中已被明确可以影响机体寿命。越来越多的研究表明微生物不仅能产生小分子化合物促进健康寿命跨度的增加乃至延长个体寿命如γ-氨基丁酸、荚膜异多糖酸,还能影响宿主的生物合成代谢如5-羟色胺,甚至间接参与宿主信号通路的调控。目前对于这些微生物的生物学功能以及对宿主寿命的影响还没有系统的总结,对肠道微生物影响寿命的证据以及生理机制进行综述,为改善老年期健康状况的干预措施提供参考。     

Biomimicry of volatile‐based microbial control for managing emerging fungal pathogens

Volatile organic compounds (VOCs) are known to be produced by a wide range of micro‐organisms and for a number of purposes. Volatile‐based microbial inhibition in environments such as soil is well‐founded, with numerous antimicrobial VOCs having been identified. Inhibitory VOCs are of interest as microbial control agents, as low concentrations of gaseous VOCs can elicit significant antimicrobial effects. Volatile organic compounds are organic chemicals typically characterized as having low molecular weight, low solubility in water, and high vapour pressure. Consequently, VOCs readily evaporate to the gaseous phase at standard temperature and pressure. This contact‐independent antagonism presents unique advantages over traditional, contact‐dependent microbial control methods, including increased surface exposure and reduced environmental persistence. This approach has been the focus of our recent research, with positive results suggesting it may be particularly promising for the management of emerging fungal pathogens, such as the causative agents of white‐nose syndrome of bats and snake fungal disease, which are difficult or impossible to treat using traditional approaches. Here, we review the history of volatile‐based microbial control, discuss recent progress in formulations that mimic naturally antagonistic VOCs, outline the development of a novel treatment device, and highlight areas where further work is needed to successfully deploy VOCs against existing and emerging fungal pathogens.     

合成生物制造

本文对2021年《生物工程学报》在合成生物制造领域发表的综述和论文进行了评述.重点讨论了大肠杆菌、枯草芽孢杆菌、谷氨酸棒杆菌、酿酒酵母、丝状真菌以及非模式细菌、非传统酵母等主要底盘细胞的设计改造,氨基酸、有机酸、维生素、高级醇、天然化合物(萜类、黄酮类、生物碱类)、抗生素类、酶与生物催化产品、生物聚合物等产品的生物制造...     

Co-habiting amphibian species harbor unique skin bacterial communities in wild populations

Although all plant and animal species harbor microbial symbionts, we know surprisingly little about the specificity of microbial communities to their hosts. Few studies have compared the microbiomes of different species of animals, and fewer still have examined animals in the wild. We sampled four pond habitats in Colorado, USA, where multiple amphibian species were present. In total, 32 amphibian individuals were sampled from three different species including northern leopard frogs (Lithobates pipiens), western chorus frogs (Pseudacris triseriata) and tiger salamanders (Ambystoma tigrinum). We compared the diversity and composition of the bacterial communities on the skin of the collected individuals via barcoded pyrosequencing of the 16S rRNA gene. Dominant bacterial phyla included Acidobacteria, Actinobacteria, Bacteriodetes, Cyanobacteria, Firmicutes and Proteobacteria. In total, we found members of 18 bacterial phyla, comparable to the taxonomic diversity typically found on human skin. Levels of bacterial diversity varied strongly across species: L. pipiens had the highest diversity; A. tigrinum the lowest. Host species was a highly significant predictor of bacterial community similarity, and co-habitation within the same pond was not significant, highlighting that the skin-associated bacterial communities do not simply reflect those bacterial communities found in their surrounding environments. Innate species differences thus appear to regulate the structure of skin bacterial communities on amphibians. In light of recent discoveries that some bacteria on amphibian skin have antifungal activity, our finding suggests that host-specific bacteria may have a role in the species-specific resistance to fungal pathogens.     

The opportunistic yeast pathogen Trichosporon asahii colonizes the skin of healthy individuals: analysis of 380 healthy individuals by age and gender using a nested polymerase chain reaction assay

Deep-seated trichosporonosis is an opportunistic fungal infection with a poor prognosis and high mortality rate. The major causative agent is Trichosporon asahii; its route of infection is not clear. To elucidate whether this microorganism is part of the cutaneous microbiota, we examined skin samples from 380 healthy Japanese ranging in age from 0 to 82 years using a nested PCR assay. The colonization frequency of T. asahii increased with age up to 13-15 years in male and 30-39 years in female subjects, subsequently decreasing gradually in both sexes until senescence. Of the nine genotypes of the intergenic spacer region of the T. asahii rRNA gene, type 1 predominated (81.7%), followed by types 4 (6.7%) and 6 (5.5%). The distribution of identified genotypes was similar to that for T. asahii isolated from clinical specimens (blood and urine) of patients with deep-seated trichosporonosis and quite different from that of environmental isolates. Additionally, T. asahii DNA was detected stably from skin samples over 1 year. The opportunistic yeast pathogen T. asahii is part of the cutaneous fungal microbiota in humans. Cutaneous T. asahii may be one of the routes through which deep-seated trichosporonosis is acquired, whereas environmental T. asahii is not associated with this infection.     

益生菌防治特应性皮炎的研究进展

特应性皮炎(atopic dermatitis,AD)是会反复发作、具有明显遗传倾向性的慢性炎症性皮肤病,发病率逐年增高.AD的发病机制主要为遗传性或获得性皮肤屏障受损引起的皮肤微生态失衡和变应原渗漏,激活对应的炎症反应,造成\"屏障受损-炎症反应\"的恶性循环.AD的传统治疗方法多采用糖皮质激素和免疫抑制剂,但其副作用的...     

Molecular analysis of the prevalent microbiota of human male and female forehead skin compared to forearm skin and the influence of make-up

Aims: To compare the bacterial diversity of two different ecological regions including human forehead, human forearm and to estimate the influence of make‐up. Methods and Results: Twenty‐two swab‐scraped skin samples were analysed by profiling bacterial 16S rRNA genes using PCR‐based sequencing of randomly selected clones. Of the 1056 clones analysed, 67 genera and 133 species‐level operational taxonomic units (SLOTUs) belonging to eight phyla were identified. A core set of bacterial taxa was found in all samples, including Actinobacteria, Firmicutes, and Proteobacteria, but pronounced intra‐ and interpersonal variation in bacterial community composition was observed. Only 4·48% of the genera and 1·50% of the SLOTUs were found in all 11 subjects. In contrast to the highly diverse microbiota of the forearm skin, the forehead skin microbiota represented a small‐scale ecosystem with a few genera found in all individuals. The use of make‐up, including foundation and powder, significantly enlarged the community diversity on the forehead skin. Conclusions: Our study confirmed the presence of a highly diverse microbiota of the human skin as described recently. In contrast to forearm skin, gender does not seem to have much influence on the microbial community of the forehead skin. However, the use of make‐up was associated with a remarkable increase in the bacterial diversity. Significance and Impact of the Study: This study enhances our knowledge about the highly complex microbiota of the human skin and demonstrates for the first time the significant effect of make‐up on the bacterial diversity of the forehead skin.     

Augmentation of systemic resistance and secondary metabolites by chitinolytic microbes in Withania somnifera against Meloidogyne incognita

Ashwagandha (Withania somnifera L. Dunal), a therapeutically imperative herb is known for its useful steroidal lactones (withanolide and withaferin) and acyl steryl glycosides. The plant is a highly susceptible host for the plant parasitic nematode, Meloidogyne incognita. Selected chitinolytic microbes, namely Cellulosimicrobium cellulans MTN13, Flavobacterium johnsoniae MTN 20, Chitiniphilus sp. MTN22 and Streptomyces sp. MTN14, alone and in combination for M. incognita management and enhancement of secondary metabolites in W. somnifera cv. Poshita were evaluated. A significant enhancement in biomass yield (1.9-fold) and disease diminution (2.7-fold) was found in the dual microbial treatment Streptomyces sp. and Chitiniphilus sp. with respect to the untreated inoculated control plants. A significant augmentation (2.7- and 2.0-fold, respectively) in withanolide A and withaferin A was also found in the same treatment. The studies revealed increment of defence variables 1.1- to 1.3-fold and 1.6- to 2.1-fold in single- and dual-microbe treatments, respectively, than the untreated inoculated plants. The stimulation of the phenylpropanoid pathway and phenolics accumulation was the maximum at 5 days post inoculation (dpi), whereas antioxidant enzymes activities were the highest at 7?dpi. The results thus highlight a possible new function of chitinolytic microbes alone and in combinations that can effectively manage M. incognita-induced stress along with enhanced active molecules of W. somnifera.