Phytochrome phosphorylation in plant light signaling.

Reversible protein phosphorylation is a switching mechanism used in eukaryotes to regulate various cellular signalings. In plant light signaling, sophisticated photosensory receptor systems operate to modulate growth and development. The photoreceptors include phytochromes, cryptochromes and phototropins. Despite considerable progresses in defining the photosensory roles of these photoreceptors, the primary biochemical mechanisms by which the photoreceptor molecules transduce the perceived light signals into cellular responses remain to be elucidated. The signal-transducing photoreceptors in plants are all phosphoproteins and/or protein kinases, suggesting that light-dependent protein phosphorylation and dephosphorylation play important roles in the function of the photoreceptors. This review focuses on the role of phytochromes' reversible phosphorylation involved in the light signal transduction in plants.     

Cryptochromes in the field: how blue light influences crop development

Light is a pivotal environmental element capable of influencing multiple physiological processes across the entire plant life cycle. Over the course of their evolution, plants have developed several families of photoreceptors such as phytochromes, phototropins, ultraviolet (UV) resistance locus 8 and cryptochromes (crys), in order to sense light stimuli and respond to their changes. Numerous genetic studies have demonstrated that functional alterations to these photoreceptors cause a change in important agronomical traits. In particular, crys, which absorb UVA/blue light, can influence seed germination, flowering induction, plant architecture, fruit metabolic content and resistance to biotic and abiotic stresses. In the years to come, the rising temperatures and alterations to precipitation patterns generated by climate change will present a dramatic challenge for our agricultural system, with its few varieties characterized by a narrow genetic pool derived from artificial selection. Here, we review the main roles of crys in determining important agronomic traits in crops, we discuss the opportunities of using these photoreceptors as genetic targets for tuning plant physiological responses to environmental change, and the molecular strategies used so far to manipulate this family of photoreceptors.     

Photobiology: Light signal transduction and photomorphogenesis

正Light is crucial for plants, not only because of photosynthesis, but also because of photomorphogenesis. As one of the most important environmental cues, light influences multiple responses in plants,including seed germination, seedling de-etiolation,shade avoidance, phototropism, stomata and chloroplast movement, circadian rhythms, and flowering     

The signal transducing photoreceptors of plants

Light signals are amongst the most important environmental cues regulating plant development. In addition to light quantity, plants measure the quality, direction and periodicity of incident light and use the information to optimise growth and development to the prevailing environmental conditions. Red and far-red wavelengths are perceived by the photoreversible phytochrome family of photoreceptors, whilst the detection of blue and ultraviolet (UV)-A wavelengths is conferred by the cryptochromes and phototropins. Higher plants contain multiple discrete phytochromes, the apoproteins of which are encoded by a small divergent gene family. In Arabidopsis, two cryptochrome and two phototropin family members have been identified and characterized. Photoreceptor action regulates development throughout the lifecycle of plants, from seed germination through to architecture of the mature plant and the onset of reproduction. The roles of individual photoreceptors in mediating plant development have, however, often been confounded by redundant, synergistic and in some cases mutually antagonistic mechanisms of action. The isolation of mutants null for individual photoreceptors and the construction of mutants null for multiple photoreceptors have therefore been paramount in elucidating photoreceptor functions. Photoreceptor action does not, however, operate in isolation from other signalling systems. The integration of light signals with other environmental cues enables plants to adapt their physiology to changing seasonal environments. This paper summarises current understanding of photoreceptor families and their functions throughout the lifecycle of plants. The integration of light signals with other environmental stimuli is also discussed.     

Novel light-activated protein kinases as key regulators of plant growth and development

Plants have evolved highly sensitive sensory photoreceptor systems to regulate various aspects of their growth and development. Many responses such as seed germination, flowering and dormancy are controlled by red and far-red regions of the solar spectrum through the phytochrome family of photoreceptors. However, several other responses such as stem growth inhibition, phototropism and opening of stomata are controlled by blue and/or ultraviolet light absorbing photoreceptors called cryptochromes and phototropin. Despite their central role in plant biology, the mode of action of these photoreceptors has been shrouded in mystery. Even the biochemical isolation of a photoreceptor, as in the case of phytochrome was accomplished decades ago, did not help in elucidating the mechanism of action. Nevertheless, due to advances in recombinant DNA technology, generation of extensive databanks and the capability to predict function by base sequence analysis, a breakthrough has now come about. It is clear that certain phytochromes, at least in the cyanobacteria and algae which represent the simplest plants, are hybrid photoreceptor-cum-kinases. These novel kinases utilize captured photons rather than conventional ligands to trigger conformational change and in consequence enzyme activity. The kinases apparently, then, cause phosphorylation of many other types of target molecules, leading eventually to various developmental changes. There is suggestive evidence that in higher plants, too, at least some phytochromes may operate as kinases. As compared to work on phytochromes, the blue light photoreceptors have begun to be studied only recently. However, the exciting discovery has been made of at least one photoactive kinase that is critically required for phototropism. This article summarizes the above discoveries from the perspective of general biology. Dedicated to the memory of Drs Harry Borthwick, Sterling Hendricks and James Bonner whose classical studies paved the way for modern researches on mechanism of action of plant photoreceptors and whom the senior author was previleged to know.     

Modulation of phototropism by phytochrome E and attenuation of gravitropism by phytochromes B and E in inflorescence stems

Light is one of the most important environmental parameters for a plant and plays a critical role throughout the life cycle. Plants sense light using the red-light-absorbing phytochromes and the blue-light-absorbing cryptochromes and phototropins. In this report, we examine the role of phytochromes in phototropism and gravitropism in inflorescence stems of Arabidopsis thaliana . Tropisms and growth responses were assayed in wild-type (WT) plants, and these responses were compared with those of the mutants phyA , phyB , phyAB , phyD and phyE . After considering growth differences, we found that phototropism of the phyE mutant is significantly less ( P  < 0.05) and that gravitropism of phyB and phyE is significantly greater ( P  < 0.05) compared with the WT responses. Interestingly, while phyE plays a positive role in phototropism, this pigment (along with phyB) attenuates gravitropism in inflorescence stems. This study adds to the growing literature demonstrating that phytochromes can play a role in blue-light-mediated responses such as phototropism.     

Phenotypic characterization of a photomorphogenic mutant

Light is arguably the most important abiotic factor controlling plant growth and development throughout their life cycle. Plants have evolved sophisticated light-sensing mechanisms to monitor fluctuations in light quality, intensity, direction and periodicity (day length). In Arabidopsis, three families of photoreceptors have been identified by molecular genetic studies. The UV-A/blue light receptors cryptochromes and the red/far-red receptors phytochromes control an overlapping set of responses including photoperiodic flowering induction and de-etiolation. Phototropins are the primary photoreceptors for a set of specific responses to UV-A/blue light such as phototropism, chloroplast movement and stomatal opening. Mutants affecting a photoreceptor have a characteristic phenotype. It is therefore possible to determine the specific developmental responses and the photoreceptor pathway(s) affected in a mutant by performing an appropriate set of photobiological and genetic experiments. In this paper, we outline the principal and easiest experiments that can be performed to obtain a first indication about the nature of the photobiological defect in a given mutant.     

A quadruple photoreceptor mutant still keeps track of time

Time measurement and light detection are inextricably linked. Cryptochromes, the blue-light photoreceptors shared between plants and animals, are critical for circadian rhythms in flies and mice [1-3]. WC-1, a putative blue-light photoreceptor, is also essential for the maintenance of circadian rhythms in Neurospora [4]. In contrast, we report here that in Arabidopsis thaliana the double mutant lacking the cryptochromes cry1 and cry2, and even a quadruple mutant lacking the red/ far-red photoreceptor phytochromes phyA and phyB as well as cry1 and cry2, retain robust circadian rhythmicity. Interestingly, the quadruple mutant was nearly blind for developmental responses but perceived a light cue for entraining the circadian clock. These results indicate that cryptochromes and phytochromes are not essential components of the central oscillator in Arabidopsis and suggest that plants could possess specific photosensory mechanisms for temporal orientation, in addition to cryptochromes and phytochromes, which are used for both spatial and temporal adaptation.     

光受体介导信号转导调控植物开花研究进展

光照是影响植物生长发育的重要环境因子, 开花是高等植物生活史上最重要的事件。植物通过光受体感知外界环境中的光照变化, 激活一系列信号转导过程从而适时开花。该文介绍了高等植物光受体的种类、结构特征和生理功能的研究进展, 并系统阐述了红光/远红光受体光敏色素、蓝光受体隐花色素以及FKF1/ZTL/LKP2等介导光信号调控植物开花的分子机制, 包括光受体对CO转录及转录后水平调控和对FT转录水平的调控等。此外, 还介绍了光受体整合光信号与温度和赤霉素等信号调控植物开花的研究进展, 并展望了未来的研究方向。     

Role of calcium ions in photosignaling processes in a plant cell

Ca²⁺ is an important structural and functional component of plant cells. During the last decade, Ca²⁺ attracted attention as a secondary messenger in signaling processes in plants to mediate the action of abiotic and biotic signals including light. The structural basis for Ca²⁺ signaling in plants, the generation of Ca²⁺ signatures and the nature of Ca²⁺ sensors are considered in relation to the functioning of plant photo-receptors phytochromes, cryptochromes, and phototropins. Special attention is focused upon genetic factors controlling the expression of light-inducible genes being closely related to above photoreceptors. The analysis of the achievements in the field of plant photoreceptor signal transduction and suggestions of some prospects for the future research were done.     

Response of mitochondrial alternative oxidase (AOX) to light signals

Mitochondrial alternative oxidase (AOX), the unique respiratory terminal oxidase in plants, catalyzes energy wasteful cyanide (CN)-resistant respiration and plays a role in optimizing photosynthesis. Recent studies from our group indicated that AOX plays a crucial role in chloroplast protection under extreme environments, such as high light (HL). Genetic data suggest that AOX is upregulated by light that was mediated by photoreceptors (phytochromes, phototropins and cryptochromes), and it also might have a particular role in relieving the overreduction of chloroplasts. Physiological analyses further suggest that AOX is essential for the dark-tolight transition, especially in the course of de-etiolation. In this mini-review, we highlight recent progress in understanding the beneficial interaction between photosynthesis and mitochondria metabolism and discuss the possible role and mechanism of AOX in dissipation of excess reduced equivalents for chloroplasts under high light condition.Key words: alternative oxidase (AOX), excess light, NAD(P)H dehydrogenases (NDs), photoreceptors, reactive oxygen species (ROS)     

Light-regulated stomatal aperture in Arabidopsis

The stomatal pores of plant leaves, situated in the epidermis and surrounded by a pair of guard cells, allow CO2 uptake for photosynthesis and water loss through transpiration. Blue light is one of the dominant environmental signals that control stomatal movements in leaves of plants in a natural environment. This blue light response is mediated by blue/UV A light-absorbing phototropins (phots) and cryptochromes (crys). Red/far-red light-absorbing phytochromes (phys) also play a role in the control of stomatal aperture. The signaling components that link the perception of light signals to the stomatal opening response are largely unknown. This review discusses a few newly discovered nuclear genes, their function with respect to the phot-, cry-, and phy-mediated signal transduction cascades, and possible involvement of circadian clock.     

LOV domain-containing F-box proteins: light-dependent protein degradation modules in Arabidopsis

Plants constantly survey the surrounding environment using several sets of photoreceptors. They can sense changes in the quantity (=intensity) and quality (=wavelength) of light and use this information to adjust their physiological responses, growth, and developmental patterns. In addition to the classical photoreceptors, such as phytochromes, cryptochromes, and phototropins, ZEITLUPE (ZTL), FLAVIN-BINDING, KELCH REPEAT, F-BOX 1 (FKF1), and LOV KELCH PROTEIN 2 (LKP2) proteins have been recently identified as blue-light photoreceptors that are important for regulation of the circadian clock and photoperiodic flowering. The ZTL/FKF1/LKP2 protein family possesses a unique combination of domains: a blue-light-absorbing LOV (Light, Oxygen, or Voltage) domain along with domains involved in protein degradation. Here, we summarize recent advances in our understanding of the function of the Arabidopsis ZTL/FKF1/LKP2 proteins. We summarize the distinct photochemical properties of their LOV domains and discuss the molecular mechanisms by which the ZTL/FKF1/LKP2 proteins regulate the circadian clock and photoperiodic flowering by controlling blue-light-dependent protein degradation.     

Magnetic intensity affects cryptochrome-dependent responses in Arabidopsis thaliana

Cryptochromes are blue-light absorbing photoreceptors found in many organisms where they have been involved in numerous growth, developmental, and circadian responses. In Arabidopsis thaliana, two cryptochromes, CRY1 and CRY2, mediate several blue-light-dependent responses including hypocotyl growth inhibition. Our study shows that an increase in the intensity of the ambient magnetic field from 33–44 to 500 μT enhanced growth inhibition in A. thaliana under blue light, when cryptochromes are the mediating photoreceptor, but not under red light when the mediating receptors are phytochromes, or in total darkness. Hypocotyl growth of Arabidopsis mutants lacking cryptochromes was unaffected by the increase in magnetic intensity. Additional cryptochrome-dependent responses, such as blue-light-dependent anthocyanin accumulation and blue-light-dependent degradation of CRY2 protein, were also enhanced at the higher magnetic intensity. These findings show that higher plants are sensitive to the magnetic field in responses that are linked to cryptochrome-dependent signaling pathways. Because cryptochromes form radical pairs after photoexcitation, our results can best be explained by the radical-pair model. Recent evidence indicates that the magnetic compass of birds involves a radical pair mechanism, and cryptochrome is a likely candidate for the avian magnetoreception molecule. Our findings thus suggest intriguing parallels in magnetoreception of animals and plants that appear to be based on common physical properties of photoexcited cryptochromes.     

Seeing the world in red and blue: insight into plant vision and photoreceptors.

Plants see light through multiple photoreceptors, including phytochromes and cryptochromes. Cryptochromes are flavoproteins that participate in many blue-light responses, including phototropism in plants and entrainment of circadian rhythms in plants and animals. A novel flavoprotein, NPH1, is also implicated in plant phototropism. Phytochromes function as serine/threonine kinases whose potential interacting partners include cryptochrome (CRY1 and CRY2).