Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants

A compilation of studies using RAPD markers for evaluating population differentiation resulted in 78 estimates of AMOVA-derived Φ_ST and 31 estimates of Nei's G_ST, as well as in 41 estimates of Nei's within-population diversity. In outcrossing taxa, estimates of between-population diversity were closely correlated with maximum geographic distance between sampled populations. A corresponding association was not found in selfing taxa. These results suggest that RAPD can be a sensitive method for detection of genetic structuring according to the isolation-by-distance model. However, it also means that sampling strategies, as applied in individual studies, can seriously influence the resulting estimates of between-population diversity. Other sampling strategies, like number of plants per population and number of scored polymorphic markers, do not seem to impart any serious artefacts. As previously verified with allozyme data, RAPD markers showed that long-lived, outcrossing, late successional taxa retain most of their genetic variability within populations. By contrast, annual, selfing and/or early successional taxa allocate most of the genetic variability among populations. Estimates for between- and within-population diversity, respectively, proved to be negatively correlated, as previously reported for allozyme data. The only major discrepancy between allozymes and RAPD markers concerns geographic range; within-population diversity was strongly affected by distributional range of the investigated species in the allozyme data but not in the RAPD data. Moreover, RAPD-based values for between-population diversity increased with increasing distributional range whereas the opposite has been reported in a large allozyme data compilation. Contrary to allozymes, RAPD marker-derived within-population diversity is probably therefore not a very good predictor of total species genetic diversity.     

What determines Orthoptera species distribution and richness in temperate semi-natural dry grassland remnants?

Wide-spread fragmentation and isolation of habitats with high nature conservation value lends increasing importance to a better understanding of the factors which determine species richness in isolated habitat patches. Using data of one of the most abundant invertebrate groups in grasslands, Orthoptera, we analysed how species richness and distribution in 60 isolated semi-natural grassland remnants in Austria were affected by five environmental variables (altitude, habitat and land use diversity within each patch, habitat diversity of areas adjacent to each patch, patch size), and related to diversity of their main food source, i.e. vascular plants. We found a significant positive correlation between Orthoptera and vascular plant species richness, with threatened Orthoptera species having the lowest correlation coefficients. Life form diversity of plants was only moderately positively correlated with Orthoptera species richness. Habitat diversity within and adjacent to the grassland patch had by far the highest loadings on the first two axes of the principal component analysis, which jointly explained 99?% of the variance, and proved to be significant for total, threatened and not threatened Orthoptera, as well as for the two Orthoptera orders occurring in Central Europe (Caelifera, Ensifera). Additionally, the distribution of the majority of those 14 Orthoptera species analysed individually was mainly correlated with habitat diversity within and adjacent to the grassland patch. However, the distribution of a significant proportion of species was associated with other factors: five species were closely related to on-site land use diversity and patch size, and the distribution of three Ensifera species was not significantly correlated to any of the explanatory variables. We conclude that a surrogate taxa approach, i.e. the use of well-known taxonomic groups (e.g. vascular plants), may indeed deliver good results for capturing total, but less so for threatened, Orthoptera species richness in semi-natural grassland remnants. Small scale habitat diversity may be crucial to allow for the co-existence of a large number of Orthoptera species and has to be taken equally into account as patch size in nature conservation.     

Multi‐scale patterns of moss and lichen richness on the Antarctic Peninsula

Mosses and lichens are the dominant macrophytes of the Antarctic terrestrial ecosystem. Using occurrence data from existing databases and additional published records, we analyzed patterns of moss and lichen species diversity on the Antarctic Peninsula at both a regional scale (1°latitudinal bands) and a local scale (52 and 56 individual snow‐ and ice‐free coastal areas for mosses and lichens, respectively) to test hypothesized relationships between species diversity and environmental factors, and to identify locations whose diversity may be particularly poorly represented by existing collections and online databases. We found significant heterogeneity in sampling frequency, number of records collected, and number of species found among analysis units at the two spatial scales, and estimated species richness using projected species accumulation curves to account for potential biases stemming from sample heterogeneity. Our estimates of moss and lichen richness for the entire Antarctic Peninsula region were within 20% of the total number of known species. Area, latitude, spatial isolation, mean summer temperature, and penguin colony size were considered as potential covariates of estimated species richness. Moss richness was correlated with isolation and latitude at the local scale, while lichen richness was correlated with summer mean temperature and, for 17 sites where penguins where present with <20 000 breeding pairs, penguin colony size. At the regional scale, moss richness was correlated with temperature and latitude. Lichen richness, by contrast, was not significantly correlated with any of the variables considered at the regional scale. With the exception of temperature, which explained 91% of the variation in regional moss diversity, explained variance was very low. Our results show that patterns of moss and lichen biodiversity are highly scale‐dependent and largely unexplained by the biogeographic variables found important in other systems.     

Species mtDNA genetic diversity explained by infrapopulation size in a host‐symbiont system

Understanding what shapes variation in genetic diversity among species remains a major challenge in evolutionary ecology, and it has been seldom studied in parasites and other host‐symbiont systems. Here, we studied mtDNA variation in a host‐symbiont non‐model system: 418 individual feather mites from 17 feather mite species living on 17 different passerine bird species. We explored how a surrogate of census size, the median infrapopulation size (i.e., the median number of individual parasites per infected host individual), explains mtDNA genetic diversity. Feather mite species genetic diversity was positively correlated with mean infrapopulation size, explaining 34% of the variation. As expected from the biology of feather mites, we found bottleneck signatures for most of the species studied but, in particular, three species presented extremely low mtDNA diversity values given their infrapopulation size. Their star‐like haplotype networks (in contrast with more reticulated networks for the other species) suggested that their low genetic diversity was the consequence of severe bottlenecks or selective sweeps. Our study shows for the first time that mtDNA diversity can be explained by infrapopulation sizes, and suggests that departures from this relationship could be informative of underlying ecological and evolutionary processes.     

Do Stacked Species Distribution Models Reflect Altitudinal Diversity Patterns?

The objective of this study was to evaluate the performance of stacked species distribution models in predicting the alpha and gamma species diversity patterns of two important plant clades along elevation in the Andes. We modelled the distribution of the species in the Anthurium genus (53 species) and the Bromeliaceae family (89 species) using six modelling techniques. We combined all of the predictions for the same species in ensemble models based on two different criteria: the average of the rescaled predictions by all techniques and the average of the best techniques. The rescaled predictions were then reclassified into binary predictions (presence/absence). By stacking either the original predictions or binary predictions for both ensemble procedures, we obtained four different species richness models per taxa. The gamma and alpha diversity per elevation band (500 m) was also computed. To evaluate the prediction abilities for the four predictions of species richness and gamma diversity, the models were compared with the real data along an elevation gradient that was independently compiled by specialists. Finally, we also tested whether our richness models performed better than a null model of altitudinal changes of diversity based on the literature. Stacking of the ensemble prediction of the individual species models generated richness models that proved to be well correlated with the observed alpha diversity richness patterns along elevation and with the gamma diversity derived from the literature. Overall, these models tend to overpredict species richness. The use of the ensemble predictions from the species models built with different techniques seems very promising for modelling of species assemblages. Stacking of the binary models reduced the over-prediction, although more research is needed. The randomisation test proved to be a promising method for testing the performance of the stacked models, but other implementations may still be developed.     

From plots to islands: species diversity at different scales

Aim To investigate how plant diversity of whole islands (‘gamma’) is related to alpha and beta diversity patterns among sampling plots within each island, thus exploring aspects of diversity patterns across scales. Location Nineteen islands of the Aegean Sea, Greece. Methods Plant species were recorded at both the whole‐island scale and in small 100 m² plots on each island. Mean plot species richness was considered as a measure of alpha diversity, and six indices of the ‘variation’‐type beta diversity were also applied. In addition, we partitioned beta diversity into a ‘nestedness’ and a ‘replacement’ component, using the total species richness recorded in all plots of each island as a measure of ‘gamma’ diversity. We also applied 10 species–area models to predict the total observed richness of each island from accumulated plot species richness. Results Mean alpha diversity was not significantly correlated with the overall island species richness or island area. The range of plot species richness for each island was significantly correlated with both overall species richness and area. Alpha diversity was not correlated with most indices of beta diversity. The majority of beta diversity indices were correlated with whole‐island species richness, and this was also true for the ‘replacement’ component of beta diversity. The rational function model provided the best prediction of observed island species richness, with Monod’s and the exponential models following closely. Inaccuracy of predictions was positively correlated with the number of plots and with most indices of beta diversity. Main conclusions Diversity at the broader scale (whole islands) is shaped mainly by variation among small local samples (beta diversity), while local alpha diversity is not a good predictor of species diversity at broader scales. In this system, all results support the crucial role of habitat diversity in determining the species–area relationship.     

上海世界博览会园区内及周边地区鸟类多样性及其影响因子

2006年3-9月,对上海世博园区及周边地区鸟类资源进行普查,并对鸟类数量、种类和环境因子相关性进行研究。结果表明,该区域内现有鸟类10目27科67种,其群落多样性指数为3.46。运用概率统计方法分析了鸟类群落结构和分布特征,并将鸟类群落指数与园林绿地的8项环境指标进行分析,表明鸟类的种数、数量以及多样性指数与公园的面积、水域面积、形状指数、生境种类呈极显著相关;鸟类多样性、均匀性指数与树种总数呈显著相关;鸟类种数与环境中的位置条件有关。同时,就世博园区绿地建设中的引鸟工程,提出了5点建议。     

Disturbance regimes and vegetation dynamics: role of floods in riverine wetlands

Abstract. This study tested whether the frequency of flood disturbances was able to slow down or stabilize vegetation succession in former braided channels over a decade. According to the Patch Dynamics Concept and to succession theory, species richness and diversity should be high but stable in the frequently (40 days/year) flooded channel, and should change over time in the infrequently (1 day/year) flooded one. Within the frequently disturbed channel, composition of vegetation as well as species richness and diversity appeared stable through dynamic equilibrium over the decade. Only one zone, because of particular geomorphological features that decreased disturbance intensity, developed highest diversity and richness as expected from the Intermediate Disturbance Hypothesis. The highest disturbance effect decreased species richness and was related to a higher spatial heterogeneity of the substrate (number of grain-size classes). In the other zones, richness and diversity appeared to be lowest where disturbance frequency was lowest or disturbance intensity was highest. From 1981 to 1987, the infrequently flooded channel underwent succession, and species richness increased in the major part of the channel, whereas diversity increased only in its extreme parts.     

Macrobenthic species composition and diversity in the Godthaabsfjord system, SW Greenland

The southwest Greenland coast is made up of large and deep sill fjords. On the shelf, a number of shallow banks separated by deep troughs are located 20–50 km from the coast. We collected three 0.1-m² van Veen grabs at nine stations along a transect spanning from the inner Godthaabsfjord influenced by glaciers, across the shallow Fyllas Bank and out to the slope of the continental shelf at approximately 1,000 m depth. Along this transect, we explored patterns of macrobenthic diversity, species composition, abundance and biomass. The sampled stations were very different in terms of environmental variables, resulting in large differences in species composition primarily related to differences in depth, silt–clay fraction and chl a content of the sediment (BIO-ENV analysis). Habitat differences also reduced species spatial ranges and the majority of species were found at only one (49%) or two (20%) stations and, consequently, species turnover or beta diversity was high and correlated to differences in depth, silt–clay fraction and median sediment grain size. Species richness and diversity were lowest in sites exposed to sediment disturbance: near the glaciers in the inner fjord (physical disturbance by mineral sedimentation) and at selected stations on the shelf (bioturbation by burrowing sand eel). Alpha diversity and richness were only weakly correlated to environmental parameters, indicating that alpha richness and diversity are influenced by several factors or that relationships are non-linear as was found for species richness and silt–clay fraction.     

Experimental tests of the dependence of arthropod diversity on plant diversity

ABSTRACT Because a diversity of resources should support a diversity of consumers, most models predict that increasing plant diversity increases animal diversity. We report results of a direct experimental test of the dependence of animal diversity on plant diversity. We sampled arthropods in a well-replicated grassland experiment in which plant species richness and plant functional richness were directly manipulated. In simple regressions, both the number of species planted ([Formula: see text] transformed) and the number of functional groups planted significantly increased arthropod species richness but not arthropod abundance. However, the number of species planted was the only significant predictor of arthropod species richness when both predictor variables were included in ANOVAs or a MANOVA. Although highly significant, arthropod species richness regressions had low [Formula: see text] values, high intercepts (24 arthropod species in monocultures), and shallow slopes. Analyses of relations among plants and arthropod trophic groups indicated that herbivore diversity was influenced by plant, parasite, and predator diversity. Furthermore, herbivore diversity was more strongly correlated with parasite and predator diversity than with plant diversity. Together with regression results, this suggests that, although increasing plant diversity significantly increased arthropod diversity, local herbivore diversity is also maintained by, and in turn maintains, a diversity of parasites and predators.     

Diversity of native and alien vascular plant species of dry grasslands in central Europe

Question: Which factors determine diversity of native and alien vascular plant species in semi‐natural dry grasslands? Location: Northern limestone Alps to the southern rim of the Bohemian massif in northern Austria. Methods: In 70 randomly chosen dry grassland patches (0.008 ha ‐ 7 ha) we sampled a complete inventory of vascular plant species at each site. We analysed the correlation between species diversity of natives, archaeophytes (pre‐1500 aliens) and neophytes (post‐1500 aliens). We used GLM to study the relationship of species number (natives, neophytes, archaeophytes) to five explanatory variables (altitude, within habitat diversity, habitat diversity of adjacent areas, within land‐use diversity and land‐use in adjacent areas). Orthogonal components of these variables were derived with a PCA and used in the models. We also tested the influence of minimum residence time (MRT) and the covariables origin, mode of introduction and life form on the number of grassland sites with neophytes with analogous GLMs. Results: Native species diversity species was positively correlated with the species diversity of new, but not old invaders. GLM explains 70% of the variance in the number of native species. Patch size explained the largest part of the variation in the number of native species. PCA axes 1 and 3 were significantly related to the number of native species. Axis 1was related to on‐site habitat and land‐use diversity. The GLM of the archaeophyte diversity explains 18% of the variance. Altitude and presence of fields and grassland in the neighbourhood mainly explained archaeophyte species diversity. The GLM of neophyte diversity explains 12% of the variance. The number of neophytes was positively related to that of archaeophytes. Only PCA axis 3, which is mainly influenced by adjacent land‐use types, showed a relationship with neophytes. MRT, mode of introduction and region of origin (but not life form) were significantly related to the number of grassland sites invaded by neophytes, explaining 35% of the variance. Conclusion: Most factors governing native species diversity are not significantly related to alien species diversity. Additional determinants of the local scale diversity of alien species exist such as region of origin and historical factors (MRT, mode of introduction).     

The lizard fauna of Guam's fringing islets: island biogeography, phylogenetic history, and conservation implications

We sampled the lizard fauna of twenty-two small islets fringing the Pacific island of Guam and used these data to shed light on the processes responsible for present-day diversity. Habitat diversity, measured by islet area and vegetation complexity, was significantly correlated with the number of species found on an islet. However, islet distance and elevation were not significant predictors of diversity. Distribution patterns were slightly different for the two major families in our sample, Scincidae and Gekkonidae: skinks needed larger islets to maintain a population than did geckos. Presence/absence patterns were highly and significantly nested, and population density was correlated with the number of islets on which a species was found. An area cladogram was poorly supported and showed no faunal similarity between nearby islands. These patterns indicate that extinctions on most islets were due mostly to non-catastrophic, long-acting biological causes. The presence on the islets of species extirpated on Guam and the lack of significant nestedness on islands with greater maximum elevation highlight the impact that predators (primarily brown treesnakes) can have. Our findings also show that small reserves will not suffice to protect endangered lizard faunas, and that the islets may serve as a short-term repository of such species until snake-free areas can be established on Guam     

Community genetics: resource addition has opposing effects on genetic and species diversity in a 150-year experiment

We used the Park Grass Experiment, begun in 1856, to test alternative hypotheses about the relationship between genetic diversity and plant species diversity. The niche variation hypothesis predicts that populations with few interspecific competitors and hence broader niches are expected to contain greater genetic diversity. The coexistence hypothesis predicts that genetic diversity within species favours coexistence among species and therefore species and genetic diversity should be positively correlated. Amplified Fragment Length Polymorphism (AFLP) markers were used to measure the genetic diversity of populations of Anthoxanthum odoratum growing in 10 plots of differing species richness that lie along resource and soil pH gradients. Genetic diversity in A. odoratum was positively correlated with the number of resources added to a plot, but not correlated with species richness. However, separate analyses have shown a negative correlation between resource addition and species richness at Park Grass and elsewhere, so genetic and species diversity appear to respond in opposite directions.     

Analysis of environmental factors in sediment based on benthic macroinvertebrates in streams,Korea

This research summarizes the data on benthic macroinvertebrates collected in the 15 streams during spring (June) and fall (September–October) of 2022. The objectives of this study were (i) to evaluate the quality of surface waters, sediments, and benthic macroinvertebrates ; and (ii) to compare the relationship with the environmental variables in water, sediments and benthic macroinvertebrates that inhabit 15 streams. A total of 114 taxa were collected. The assemblages from the 15 sites were dominated by Chironomidae and Tubificidae, especially Chironomidae constituted 45.0% density occurrence. The low grades of Benthic Macroinvertebrate Index (BMI) were calculated in 10 sites with disturbed (“poor” or “very poor”). Low BMI sites mostly showed Tubificidae or Chironomidae dominant characteristics. The biological indices, BMI, % Tubificidae, and % Chironomidae, were significantly correlated with DO and conductivity. DO was also significantly correlated with all the benthic macroinvertebrate factors and diversity except percent Tubificidae. The heavy metal parameters were correlated mostly with species number, BMI, and diversity index. The objectives of this study examine the diversity of benthic macroinvertebrate in the 15 streams and investigate the relative importance of environmental quality for benthic macroinvertebrate distribution.     

哈尔滨市主要城市绿地特征和耦合关系

采用样方法调查了哈尔滨市17块绿地的植物多样性,研究城市绿地生态系统中本土植物多样性对外来植物的影响规律。结果如下:哈尔滨市绿地有75种外来植物,外来栽培植物42种,外来非栽培植物33种。在哈尔滨市绿地植物群落中,外来栽培植物的平均盖度、平均重要值和平均出现频度均较高;外来非栽培种的平均盖度、平均重要值较低,而平均出现频度较高。绿地本土植物物种数与外来栽培种、外来非栽培种的物种数极显著正相关(P<0.01),与外来非栽培种的平均出现频度显著负相关(P<0.05)。绿地乔木层本土植物的香农威尔指数、物种丰富度与外来栽培种、外来非栽培种的物种数均显著负相关(P<0.05),乔木层本土植物的均匀度与外来非栽培种的平均出现频度极显著负相关(P<0.01);灌木层本土植物的物种丰富度与外来栽培种的平均重要值显著负相关(P<0.05);草本层本土植物的均匀度与外来非栽培种的平均相对盖度显著正相关(P<0.05)。随绿地总面积的增加,外来栽培种和外来非栽培种的物种数增加,平均出现频度均呈现显著降低的趋势。随建成时间增加,外来栽培种的平均出现频度呈非线形变化,外来非栽培种的平均出现频度呈现降低的趋势。应提高哈尔滨市绿地本土植物的多样性,严格控制新建成的、总面积较小的绿地中外来植物的引种栽培管理,以防止外来植物发展成为危害本地生态系统的入侵植物。     

Expansion of genome coding regions by acquisition of new genes

As it is the case for non-coding regions, the coding regions of organisms can be expanded or shrunk during evolutionary processes. However, the dynamics of coding regions are expected to be more correlated with functional complexity and diversity than are the dynamics of non-coding regions. Hence, it is interesting to investigate the increase of diversity in coding regions – the origin and evolution of new genes – because this provides a new component to the genetic variation underlying the diversity of living organisms. Here, we examine what is known about the mechanisms responsible for the increase in gene number. Every mechanism affects genomes in a distinct way and to a different extent and it appears that certain organisms favor particular mechanisms. The detail of some interesting gene acquisitions reveals the extreme dynamism of genomes. Finally, we discuss what is known about the fate of new genes and conclude that many of the acquisitions are likely to have been driven by natural selection; they increase functional complexity, diversity, and/or adaptation of species. Despite this, the correlation between complexity of life and gene number is low and closely related species (with very similar life histories) can have very different number of genes. We call this phenomenon the G-value paradox.     

黄河源区不同退化程度高寒草原群落生产力、物种多样性和土壤特性及其关系研究

近些年来,气候暖干化和过度放牧导致黄河源区高寒草原发生明显退化,严重影响了当地畜牧业和环境的可持续发展。退化后,植被群落生产力、物种多样性和土壤因子之间相互作用、相互影响,使生态系统持续恶化。以往的研究中研究人员对退化后群落生产力和物种多样性关系关注较多,但对退化过程中土壤要素变化的重视程度往往不够。因此,探究不同退化程度下高寒草原群落生产力、物种多样性和土壤特性及其关系对于认识高寒草地退化过程及退化草地恢复具有重要现实意义。在黄河源区采用空间分布代替时间演替的方法,根据植被和土壤特征选取了未退化到严重退化5个退化梯度,探讨不同退化程度下高寒草原群落生产力、物种多样性和土壤特性及其关系。结果表明：1）随着退化程度的加剧,群落地上和地下生物量均呈先稳定后降低的趋势,在轻度退化阶段达到最大值,重度和严重退化阶段显著降低;2）Shannon-Wiener多样性指数在轻度和中度退化阶段显著增加了20%和15%（P=0.025和P=0.039）,均匀度指数从未退化到重度退化变化不明显,严重退化阶段物种多样性指数均显著降低;3）土壤水分、各深度土壤有机碳、全氮、铵态氮和硝态氮均呈先稳定后降低的变化规律,土壤容重随着退化程度的加剧而显著增加;4）群落生物量、物种多样性与土壤养分呈正相关关系,与土壤容重呈负相关关系,冗余分析结果显示土壤容重、硝态氮、有机碳是退化过程中驱动植被因子变化的主要因素。因此,针对不同退化阶段采取不同的恢复治理措施,尤其是改善土壤养分和物理性质,同时对中度和重度退化两个关键阶段应该给予更多的关注。     

四川茂县土地岭大熊猫走廊带植被恢复格局及其与干扰的关系

通过样带调查和TWINSPAN、DCCA分析,从植物种、植物群落及其多样性与环境关系方面,研究了岷江上游土地岭大熊猫走廊带恢复植被的干扰状况。结果表明：应用TWINSPAN分类,并结合优势种组成、干扰状况分析及DCCA排序,可将植被划分为6个群落类型,同时划分出响应型、迟钝型、中度干扰忍耐型和重度干扰忍耐型4类干扰响应的植物类型。以样方物种和以样方多样性指数的DCCA分析结果基本一致,物种及群落的空间分布呈明显的聚集格局,反映其与环境因子间的密切关系。DCCA排序图上,海拔差、坡形、与公路距离、坡度及道路条数对群落和物种分布有明显的影响,与干扰相关性最大的坡度、样地道路数目、与公路间的距离3个因子反映了植被的干扰梯度。干扰对土地岭恢复植被影响显著,干扰降低了群落的物种多样性,同时阻碍了演替进程。     

水淹干扰下水库水滨带植物群落谱系结构与物种多样性格局

群落谱系结构将物种系统发育信息整合到群落中，给生物多样性研究提供了全新视角。为探讨水淹干扰下水库水滨带植物群落物种多样性维持机制，以丹江口水库水滨带为研究区域，以南水北调中线一期工程运行前的原有水滨带植被为研究对象，分析不同水淹干扰强度下群落谱系结构和物种多样性及其与环境因素的关系。结果表明：(1)随着水淹干扰强度增加，群落物种丰富度、物种多样性和谱系多样性显著降低。谱系结构指数虽无显著差异，但随着水淹干扰强度增加呈现由发散到聚集的变化趋势。表明水滨带植物群落物种多样性维持机制是生境过滤和生态位分化共同驱动的结果，并且随着水淹干扰强度增加呈现生境过滤作用增加、物种间竞争排斥作用减弱的生态过程影响规律。(2)坡度、土壤质地、速效氮和全氮含量对整个水滨带植物群落物种丰富度、物种多样性和谱系多样性影响显著。此外，土层厚度和速效磷对物种丰富度和土层厚度对谱系多样性也影响显著。而仅有速效氮含量对谱系结构指数影响显著；轻度水淹干扰下坡向、速效磷含量与多样性指数显著相关；中度水淹干扰下坡度、土层厚度、土壤质地、土壤总氮含量与多样性指数显著相关，土壤pH、全氮和全磷含量与谱系结构指数显著相关；重度水淹...     

Modelling sponge species diversity using a morphological predictor: a tropical test of a temperate model

The contribution of sponges to marine surveys is often underestimated due to problems of identification, synonymous species and limited numbers of specialists in the field. Bell & Barnes (2001) illustrated how sponge morphological diversity (diversity of body forms) might be used as a predictor of sponge species diversity and richness. This study investigated these relationships at six tropical West Indian Ocean localities in a number of habitat types. These habitats included tropical coral reefs, soft substratum (seagrass, mangrove and sand), caves and boulders. Sampling was undertaken at three depth zones in coral reef habitats only (intertidal, 10–15 m and 20–25 m), with the other habitats sampled in less than 10m of water. Species diversity and richness were significantly correlated (P < 0.05) with morphological diversity at all localities and depths in coral reef and soft substratum habitats. However, no significant correlation was found between these variables in cave or boulder habitats. The slope of the linear regression found between morphological diversity and species diversity did not significantly differ between coral reef, soft substratum and temperate reef (data taken from Bell & Barnes 2001) habitats. Similarly coral reefs showed the same relationship between morphological diversity and species richness as temperate reefs, however the relationship between morphological diversity and species richness was significantly different at both habitats compared with soft substratum environments. Sponge morphological diversity therefore may be more useful as a predictor of sponge species diversity, rather than species richness, as the former relationship is common between more habitats than the latter.