Honeyeater ecology: An introduction

Abstract

Nectar-feeding birds are often used for testing quantitative models but most of this work has been done on groups in the Northern Hemisphere and only recently have workers turned their attention to honeyeaters (Meliphagidae). Predictions of upper size limits derived from North America appear inappropriate and possible reasons for this are discussed. One; the suggested evolutionary links between nectar-feeding birds and their flowers, may not be as close for honeyeaters but further work is needed. Other aspects such as research on community and social relationships among honeyeaters appears rewarding but little is known.

We caution workers on expecting agreement with wide generalisations in any topic because of known variability in movements and diet in different areas and for different individuals.     

The relative importance of ecology and geographic isolation for speciation in anoles

The biogeographic patterns in sexually reproducing animals in island archipelagos may be interpreted as reflecting the importance of allopatric speciation. However, as the forms are allopatric, their reproductive isolation is largely untestable. A historical perspective integrating geology and molecular phylogeny reveals specific cases where ancient precursor islands coalesce, which allows the application of population genetics to critically test genetic isolation. The Anolis populations on Martinique in the Lesser Antilles are one such case where species-level populations on ancient precursor islands (ca 6-8Myr BP) have met relatively recently. The distribution of the mtDNA lineages is tightly linked to the precursor island, but the population genetic analysis of microsatellite variation in large samples shows no evidence of restricted genetic exchange between these forms in secondary contact. This tests, and rejects, the hypothesis of simple allopatric speciation in these forms. By contrast, Martinique has pronounced environmental zonation, to which anoles are known to adapt. The population genetic analysis shows restricted genetic exchange across the ecotone between xeric coastal habitat and montane rainforest. This does not indicate full ecological speciation in these forms, but it does suggest the relative importance of the role of ecology in speciation in general.     

Predictive ecology: systems approaches

The world is experiencing significant, largely anthropogenically induced, environmental change. This will impact on the biological world and we need to be able to forecast its effects. In order to produce such forecasts, ecology needs to become more predictive--to develop the ability to understand how ecological systems will behave in future, changed, conditions. Further development of process-based models is required to allow such predictions to be made. Critical to the development of such models will be achieving a balance between the brute-force approach that naively attempts to include everything, and over simplification that throws out important heterogeneities at various levels. Central to this will be the recognition that individuals are the elementary particles of all ecological systems. As such it will be necessary to understand the effect of evolution on ecological systems, particularly when exposed to environmental change. However, insights from evolutionary biology will help the development of models even when data may be sparse. Process-based models are more common, and are used for forecasting, in other disciplines, e.g. climatology and molecular systems biology. Tools and techniques developed in these endeavours can be appropriated into ecological modelling, but it will also be necessary to develop the science of ecoinformatics along with approaches specific to ecological problems. The impetus for this effort should come from the demand coming from society to understand the effects of environmental change on the world and what might be performed to mitigate or adapt to them.     

Levels of understanding in ecology: interspecific competition and community ecology

Abstract Ecological interpretation has been subject to several divisive controversies, involving, for example, the significance of density dependence and interspecific competition as ecological processes. Generally, resolution has been obtained through compromise and concensus or calls for yet more data. Essentially, both sides in the discussion are seen to have been correct to some extent. As a consequence the debates have been portrayed widely as having been sterile. We agree, but only because they have been conducted at a level so superficial that the relevance of the original criticisms to the theoretical structure of ecology has not been widely appreciated, nor resolved. Debate that deals with ecological generalizations must be conducted at a level appropriate to such aims.     

Our microbial selves: what ecology can teach us

Advances in DNA sequencing have allowed us to characterize microbial communities--including those associated with the human body--at a broader range of spatial and temporal scales than ever before. We can now answer fundamental questions that were previously inaccessible and use well-tested ecological theories to gain insight into changes in the microbiome that are associated with normal development and human disease. Perhaps unsurprisingly, the ecosystems associated with our body follow trends identified in communities at other sites and scales, and thus studies of the microbiome benefit from ecological insight. Here, we assess human microbiome research in the context of ecological principles and models, focusing on diversity, biological drivers of community structure, spatial patterning and temporal dynamics, and suggest key directions for future research that will bring us closer to the goal of building predictive models for personalized medicine.     

The importance of physiological ecology in conservation biology

Many of the threats to the persistence of populations of sensitivespecies have physiological or pathological mechanisms, and thosemechanisms are best understood through the inherently integrativediscipline of physiological ecology. The desert tortoise waslisted under the Endangered Species Act largely due to a newlyrecognized upper respiratory disease thought to cause mortalityin individuals and severe declines in populations. Numeroushypotheses about the threats to the persistence of desert tortoisepopulations involve acquisition of nutrients, and its connectionto stress and disease. The nutritional wisdom hypothesis positsthat animals should forage not for particular food items, butinstead, for particular nutrients such as calcium and phosphorusused in building bones. The optimal foraging hypothesis suggeststhat, in circumstances of resource abundance, tortoises shouldforage as dietary specialists as a means of maximizing intakeof resources. The optimal digestion hypothesis suggests thattortoises should process ingesta in ways that regulate assimilationrate. Finally, the cost-of-switching hypothesis suggests thatherbivores, like the desert tortoise, should avoid switchingfood types to avoid negatively affecting the microbe communityresponsible for fermenting plants into energy and nutrients.Combining hypotheses into a resource acquisition theory leadsto novel predictions that are generally supported by data presentedhere. Testing hypotheses, and synthesizing test results intoa theory, provides a robust scientific alternative to the popularuse of untested hypotheses and unanalyzed data to assert theneeds of species. The scientific approach should focus on hypothesesconcerning anthropogenic modifications of the environment thatimpact physiological processes ultimately important to populationphenomena. We show how measurements of such impacts as nutrientstarvation, can cause physiological stress, and that the endocrinemechanisms involved with stress can result in disease. Finally,our new syntheses evince a new hypothesis. Free molecules ofthe stress hormone corticosterone can inhibit immunity, andthe abundance of "free corticosterone" in the blood (thoughtto be the active form of the hormone) is regulated when thecorticosterone molecules combine with binding globulins. Thesex hormone, testosterone, combines with the same binding globulin.High levels of testosterone, naturally occurring in the breedingseason, may be further enhanced in populations at high densities,and the resulting excess testosterone may compete with bindingglobulins, thereby releasing corticosterone and reducing immunityto disease. This sequence could result in physiological andpathological phenomena leading to population cycles with a periodthat would be essentially impossible to observe in desert tortoise.Such cycles could obscure population fluctuations of anthropogenicorigin.     

Measurement scale in maximum entropy models of species abundance

The consistency of the species abundance distribution across diverse communities has attracted widespread attention. In this paper, I argue that the consistency of pattern arises because diverse ecological mechanisms share a common symmetry with regard to measurement scale. By symmetry, I mean that different ecological processes preserve the same measure of information and lose all other information in the aggregation of various perturbations. I frame these explanations of symmetry, measurement, and aggregation in terms of a recently developed extension to the theory of maximum entropy. I show that the natural measurement scale for the species abundance distribution is log-linear: the information in observations at small population sizes scales logarithmically and, as population size increases, the scaling of information grades from logarithmic to linear. Such log-linear scaling leads naturally to a gamma distribution for species abundance, which matches well with the observed patterns. Much of the variation between samples can be explained by the magnitude at which the measurement scale grades from logarithmic to linear. This measurement approach can be applied to the similar problem of allelic diversity in population genetics and to a wide variety of other patterns in biology.     

Antarctic ecology from genes to ecosystems: the impact of climate change and the importance of scale

Antarctica offers a unique natural laboratory for undertaking fundamental research on the relationship between climate, evolutionary processes and molecular adaptation. The fragmentation of Gondwana and the development of wide-scale glaciation have resulted in major episodes of extinction and vicariance, as well as driving adaptation to an extreme environment. On shorter time-scales, glacial cycles have resulted in shifts in distribution, range fragmentation and allopatric speciation, and the Antarctic Peninsula is currently experiencing among the most rapid climatic warming on the planet. The recent revolution in molecular techniques has provided a suite of innovative and powerful tools to explore the consequences of these changes, and these are now providing novel insights into evolutionary and ecological processes in Antarctica. In addition, the increasing use of remotely sensed data is providing a large-scale view of the system that allows these processes to be set in a wider spatial context. In these two volumes, we collect a wide range of papers exploring these themes, concentrating on recent advances and emphasizing the importance of spatial and temporal scale in understanding ecological and evolutionary processes in Antarctica.     

The role of spatial scale and the perception of large-scale species-richness patterns

Despite two centuries of exploration, our understanding of factors determining the distribution of life on Earth is in many ways still in its infancy. Much of the disagreement about governing processes of variation in species richness may be the result of differences in our perception of species‐richness patterns. Until recently, most studies of large‐scale species‐richness patterns assumed implicitly that patterns and mechanisms were scale invariant. Illustrated with examples and a quantitative analysis of published data on altitudinal gradients of species richness (n = 204), this review discusses how scale effects (extent and grain size) can influence our perception of patterns and processes. For example, a hump‐shaped altitudinal species‐richness pattern is the most typical (c. 50%), with a monotonic decreasing pattern (c. 25%) also frequently reported, but the relative distribution of patterns changes readily with spatial grain and extent. If we are to attribute relative impact to various factors influencing species richness and distribution and to decide at which point along a spatial and temporal continuum they act, we should not ask only how results vary as a function of scale but also search for consistent patterns in these scale effects. The review concludes with suggestions of potential routes for future analytical exploration of species‐richness patterns.     

The importance of a relative shortage of food in animal ecology

Summary It is proposed that for many if not most animals — both herbivore and carnivore, vertebrate and invertebrate — the single most important factor limiting their abundance is a relative shortage of nitrogenous food for the very young. Any component of the environment of a plant, by varying the amount of adequately nutritious plant tissue available to herbivores, may consequently affect the abundance of food through all subsequent trophic levels; in this regard weather may be important more often than is immediately obvious.The hypothesis proposes that animals live in a variably inadequate environment wherein many are born but few survive, and leads to a concept of populations being limited from below rather than controlled from above. And it may lead to a reappraisal of the role of predation, competition and social and territorial behaviour as factors likely to influence the numbers of animals in the environment, the response of pests to manipulation of populations of their food plants by Man, and the likely effectiveness of agents of biological control.     

Nitrogen deposition mediates the effects and importance of chance in changing biodiversity

Nitrogen deposition is changing biodiversity on Earth. We need to understand the underlying mechanisms to conserve biodiversity better. Both selection and chance are potential mechanisms, and they may operate concurrently. Then, what are the respective effects of selection and chance, what is their relative importance and how do they change with increasing nitrogen deposition rate? Here, we performed a 6‐year nitrogen addition experiment (0–28 g N/m²/year) in a typical steppe ecosystem of Inner Mongolia to investigate the community structure of plants, bacteria and ammonia‐oxidizing Archaea (AOA). We developed an experimentally based calculation method to first separate the structural variations between plots into the effects of selection (S) and chance (C), and then calculate their relative importance. Our results showed that as nitrogen addition rate increased, S for both plants and bacteria increased, but C for plants first increased and then decreased, and C for bacteria also increased; meanwhile, both S and C for AOA changed nonlinearly. As nitrogen addition rate increased, the importance of chance decreased on the whole for all these communities, but it decreased nonlinearly for plants and bacteria, with a local increase at certain intermediate rates. At all treatments, the importance of chance was <0.5 for plants, but >0.5 for AOA. These results demonstrated that nitrogen deposition changed biodiversity by mediating the effects and importance of chance, implicating different strategies should be adopted in conserving biodiversity according to nitrogen deposition rate and community properties.