Dynamics of the shallow-water fish assemblage of the Patos Lagoon estuary (Brazil) during cold and warm ENSO episodes

In southern Brazil, cold ( La Niña ) and warm ( El Niño ) episodes of the El Niño Southern Oscillation (ENSO) phenomenon cause drought and high rainfall, respectively. The low precipitation and freshwater outflow associated with La Niña during 1995–1996 were associated with an increase in the abundance of marine species in the Patos Lagoon estuary. During the 1997–1998 El Niño , high precipitation and river discharge were associated with low abundance of marine species in the estuary. ANOVA results showed a higher abundance during La Niña than El Niño for estuarine resident (RES) and estuarine dependent (DEP) fishes. During La Niña catch per unit of effort (CPUE) of RES increased from the marine to estuarine area, but during El Niño CPUE increased at the marine area and diminished during summer and autumn in some estuarine sites. DEP fishes had an opposite abundance pattern. During La Niña , these fishes were abundant at the coastal marine area and along some estuarine sites, but during El Niño , CPUE remained almost the same at the marine area but dropped along some estuarine sites. These different abundance patterns for dominant fish groups yielded a positive interaction between stations and climatic events. With higher river discharge and the consequent decline of dominant euryhaline fishes, such as Mugil platanus and Atherinella brasiliensis , freshwater species increased in abundance and richness in the shallow waters of the stuary. The ENSO phenomenon influences precipitation and estuarine salinity in southern Brazil and thereby seems to have a strong influence on recruitment, immigration, and emigration dynamics of fish species living within and adjacent to estuarine habitats.     

Juvenile salmon in estuaries: comparisons between North American Atlantic and Pacific salmon populations

All anadromous fishes, including juvenile salmon, encounter estuarine habitats as they transition from riverine to marine environments. We compare the estuarine use between juvenile Atlantic salmon (Salmo salar) in the Penobscot River estuary and Pacific salmon (Oncorhynchus spp.) in the Columbia River estuary. Both estuaries have been degraded by anthropogenic activities. Atlantic and Pacific salmon populations in both basins rely heavily on hatchery inputs for persistence. Pacific salmon, as a group, represent a continuum of estuarine use, from species that move through rapidly to those that make extensive use of estuarine habitats. While Atlantic salmon estuarine use is predominantly similar to rapidly moving Pacific salmon, they can exhibit nearly the entire range of Pacific salmon estuarine use. Both slow and rapidly migrating Atlantic and Pacific salmon actively feed in estuarine environments, consuming insect and invertebrate prey. Interactions between juvenile salmon and estuarine fish communities are poorly understood in both estuaries, although they experience similar avian and marine mammal predators. Estuaries are clearly important for Atlantic and Pacific salmon, yet our understanding of this use is currently insufficient to make informed judgments about habitat quality or overall estuary health. This review of salmonid migration through and residency within estuaries identifies actions that could hasten restoration of both Atlantic and Pacific salmon populations.     

Estuarine Typology and the Structuring of Fish Communities in South Africa

Synopsis Some 190 South African estuaries, covering all biogeographic provinces within the region, were classified into three types based on a combination of mouth condition and estuary size (surface area). The fish communities of the estuary types within each zoogeographic region were described and compared. Multivariate analyses revealed that each estuary type contained somewhat distinct fish communities. In addition, the study identified common patterns in species richness and ichthyofaunal composition. Open estuaries have relatively high species richness; this is a reflection of a permanent or near-permanent connection with the sea which allows access into these estuaries by all marine migrant species within the region. Intermittent connection with the sea limits the recruitment and utilisation of closed estuaries by marine migrant species; this results in reduced species richness in moderate to large closed estuaries. Small closed estuaries exhibit the lowest species richness and this is probably a result of their limited habitat and increased isolation from the sea. The key fishes that utilise estuaries could also be categorised into a number of groups based on their relative importance within each estuary type. Some species are largely restricted to predominantly open systems. Other taxa, while important in predominantly open estuaries, also occur in moderate to large closed systems. Some estuarine-associated species are well represented in all estuary types but exhibit a greater importance in closed estuaries. This study has shown that South African fish communities not only reflect estuarine typology but also respond to these differences in a consistent manner that spans all zoogeographic regions. The prevalence of similar patterns in other parts of the world suggests that estuarine typology is a major driver in the structuring of global estuarine fish communities.     

The composition and community structure of the ichthyofauna of the upper Scheldt estuary: synthesis of a 10-year data collection (1991–2001)

Fish collections on the cooling water filter screens of the Doel power plant were used to analyse temporal trends in estuarine fish populations of the upper Scheldt estuary, Belgium. Between 1991 and 2001, 62 species shared the estuary, with 15 species present at any one time. Identified were 23 marine stragglers, 16 freshwater species and four diadromous species, but their contribution to the total catch was insignificant. In terms of numbers, marine estuarine opportunists (17 species) mainly occurring as juveniles and estuarine residents (two species) were the dominant life cycle categories. Six fish species contributed to >97% of the total catch: three Pomatoschistus species [P. minutus (32%), P. microps (30%) and P. lozanoi (6%)], two Clupeidae [Clupea harengus (16%) and Sprattus sprattus (8%)] and Syngnathus rostellatus (5%). Abundance of almost all species in the estuary was highly seasonal and characterized by pronounced abundance peaks. Ordination of the data showed that variability in the temporal structure of estuarine fish community was first determined by differences in annual recruitment and then by predictable, cyclical patterns of species abundance.     

Potential re-establishment of diadromous fish species in the River Scheldt (Belgium)

This study (2002) documents on the inland penetration off diadromous fish species into the tidal and non-tidal part of the River Scheldt and on the impact of two lock-weir complexes. Long-term trends in oxic conditions show the river is undergoing a natural recovery process, nevertheless five of ten diadromous species recorded were still restricted to the brackish part of the estuary. Despite poor conditions, five species reached the upper freshwater part of the estuary. Erratic free-flowing conditions at the tidal weir offered limited opportunities for some diadromous species to migrate into the non-tidal part of the river. Upstream migration over the second barrier is almost completely blocked. Rehabilitation schemes to restore self-sustaining populations of diadromous fish in the cross-border River Scheldt need to include the building of fish bypasses and improved wastewater treatment and habitat restoration programmes. Guest editors: S. Dufour, E. Prévost, E. Rochard & P. Williot Fish and diadromy in Europe (ecology, management, conservation)     

Opportunistic use of estuarine habitat by juvenile bull trout, <Emphasis Type="Italic">Salvelinus confluentus</Emphasis>, from the Elwha River before,during, and after dam removal

Estuaries are used by anadromous fishes, either as the definitive marine habitat or as transition habitat as they move to fully marine waters, and extent of estuary use may vary with habitat conditions and fish attributes. Bull trout (Salvelinus confluentus) are commonly fluvial or adfluvial, though anadromous populations also exist. However, little is known about estuary use, especially by juveniles of this threatened species. We sampled the estuaries of the Elwha River, where a spawning population exists, and the nearby Salt Creek, where none exists, to reveal seasonal timing of estuarine use by juvenile bull trout, size of those using the estuary, and possible use of the non-natal estuary. We captured juvenile bull trout (all ≥100 mm FL, most <300 mm) in the Elwha River estuary in all months except August, but primarily December through May. None was captured in Salt Creek’s estuary despite comparable sampling effort. We also evaluated how dam removal on the Elwha River influenced bull trout estuarine occupancy by sampling before, during, and after dam removal, because this process enlarged the estuary but also increased turbidity and sediment transport in the lower river. Catches were low before dam removal, increased during and immediately after removal, and returned to low levels in recent years, suggesting that juveniles temporarily sought refuge from conditions associated with dam removal. Our findings indicate juvenile bull trout occupy estuarine habitat opportunistically; this information may aid conservation efforts as anadromous populations occur elsewhere in rivers with estuaries altered by human development.     

Spatiotemporal Variation in Shallow-Water Freshwater Fish Distribution and Abundance in a Large Subtropical Coastal Lagoon

Patos Lagoon is located off the southern Brazilian coast and represents one of the largest coastal lagoons in the world. We estimated hydrological and physicochemical conditions associated with spatial variation in the abundance and diversity of freshwater fishes along the lagoon, and inter-annual variability in abundances of freshwater fishes occurring in its estuarine zone. During our study, the region experienced two periods of average rainfall and two periods with above-average rainfall. The characids Astyanax eigenmaniorum and Oligosarcus jenynsii and the siluriform Parapimelodus nigribarbis were the most abundant freshwater fishes in the estuary during wet periods when water levels were higher and salinity was lower. Increases in abundance of these species in the estuarine area, all of which members of primary-division freshwater families, apparently were associated with pulses of reproduction and passive transport from freshwater habitats located near middle and upper lagoon reaches. Abundance of species from secondary freshwater families, such as poeciliids and cichlids, were less correlated with hydrological conditions, and their patterns of occurrence in the estuary suggest active migration from nearby freshwater habitats draining into this area. Findings indicate that freshwater discharge in the basin and expansion/retraction of freshwaters in the middle-upper lagoon determined patterns of freshwater fish abundance and species richness in the estuarine zone.     

Factors influencing the behavior and duration of residence of adult Chinook salmon in a stratified estuary

The duration of residence, behavior, and thermal experience of adult Chinook salmon (Oncorhynchus tshawytscha) in a stratified lagoon-type estuary over a four-year period was determined using acoustic and radio biotelemetry transmitters and archival temperature tags. Results did not support the hypothesis that adult Chinook salmon would hold extensively and migrate slowly through the estuarine lagoon with return trips to the sea and use of the salt wedge for behavioral thermo-osmoregulation in response to high summer water temperatures. Passive tidal transport was not observed as predicted and entry from the sea to the estuarine lagoon occurred during all tidal phases suggesting that conserving energy was not a priority for fish during the estuarine phase of their migration. An unexpected finding was that the persistent pursuit pressure of pinnipeds, especially from California sea lions (Zalophus californianus), appeared to negate the suitability of estuarine lagoon as holding habitat. This finding led to the hypothesis that the risk of pinniped predation was primarily responsible for the brief residence (<24 h on average) and rapid migration (mean 1.2 km/h, 0.42 body lengths/s) of adult Chinook salmon in the estuarine lagoon, especially given its relatively small size (7 km). This hypothesis will be difficult to test without exclusion of pinnipeds. Thermal records of fish that retreated back to the sea after tagging suggested that use of the marine river plume could be important for osmotic adaption to allow rapid migration through estuaries, which often contain concentrations of predators anticipating the return of migrating salmon. Alternatively, use of the marine river plume could have occurred independent of predators. Fish retreating back to the sea should be considered a tagging effect as downstream movement commonly occurs when adult salmonids are released after tagging. There was no evidence of any other tagging effects or biased behavior by fish tagged in this study. Regardless of the reasons, the successful migration of fish that held for weeks in the sea after tagging indicates that there could be considerable flexibility in the river entry timing of some salmon stocks. Tagging adult salmonids in the sea as they approach their natal rivers is ideal but the associated logistical challenges and expense make tagging fish immediately upon entrance to river mouths the next best option when possible.     

Feeding activity and food habits of the shad, Ethmalosa fimbriata (Bowdich), in the coastal waters of Cape Coast, Ghana

The monthly feeding activity and food habits of populations of Ethmalosa fimbriata occurring in the sea and an estuary in Cape Coast, Ghana district were investigated during a 14-month period. The juvenile fish, whose total length (T.L.) ranged from 5.3 to 14.7 cm, occur in the estuary and appeared to be more active feeders than the marine samples which measured 15.0–30.4 cm. The peak feeding activity in the marine population coincided with the onset of'upwelling' in the sea, which period is characterized by high salinities, decreasing temperatures and high zooplankton production. The species is primarily a plankton feeder. The stomachs of the marine samples contained mainly protozoa, crustacea, molluscan larvae and a considerable amount of detritus while the stomachs of the estuarine fish contained mainly phytoplankton, protozoa, sand grains and organic detritus. These observations have been discussed in relation to other reports on populations occurring along the West African coast.     

The influence of freshwater flows on two estuarine resident fish species show differential sensitivity to the impacts of drought,flood and climate change

Estuaries are particularly susceptible to climate change and drought resulting in atypical changes to freshwater flows. How such changes in flow impact on the ecology of estuarine fishes may depend on how a species moves in response to changing flow conditions. Acoustic telemetry was used to interpret fine-scale movements of two co-inhabiting estuarine fish species, black bream, Acanthopagrus butcheri and estuary perch, Macquaria colonorum in relation to freshwater flows, season and moon phase. We found black bream to be highly mobile, regularly travelling the length of the estuary and into the neighbouring estuaries. In contrast, estuary perch had particular home ranges and made occasional, upstream or downstream movements. Possibly influenced by freshwater flows, estuary perch moved at greater rates in the Tambo compared to fish in the Mitchell. Black bream resided in the upper estuary during winter and spring and the lower estuary during summer and autumn, whereas estuary perch remained in the upper estuary throughout the year, with occasional downstream movements in winter and spring. This study revealed 1) significantly large increases in freshwater flows result in mass downstream movements in both species, 2) fish moved upstream during full moons and 3) there are contrasting spatio-temporal patterns in movement between species. The results from this study highlight that estuarine fishes are likely to show differential sensitivity to the impacts of drought and climate change and illustrate how acoustic telemetry methods can be used to determine the environmental needs of fishes and help efforts to conserve and manage estuaries worldwide.     

Environmental influences on seasonal distribution of coastal and estuarine fish assemblages at Wemindji,eastern James Bay

Synopsis The coastal fish assemblages of Wemindji, eastern James Bay, were studied in 1987 and 1988 to describe seasonal utilization of the Maquatua River estuary and the adjacent coastal waters by marine and anadromous fishes. Fish diversity was low (11 sp.) and experimental gill net catches were highly variable between sites in the estuary and coastal waters, and also seasonally at a given site. During summer, the estuarine fishes were numerically dominated by two marine species, the fourhorn sculpin,Myoxocephalus quadricornis, and the slender eelblenny,Lumpenus fabricii, and also by juvenile cisco,Coregonus artedii, and juvenile lake whitefish,C. clupeaformis. In coastal waters, three marine species were abundant: the shorthorn sculpin,M. scorpius, the arctic sculpin,M. scorpioides and the Greenland cod.Gadus ogac. In contrast with the estuary, large (> 270 mm) cisco and lake whitefish were abundant in coastal waters indicating extensive movements of these species in James Bay during the summer. Distribution patterns were influenced by a combination of physical conditions (salinity and temperature) and biological characteristics (habitat choice, migration and reproduction) depending on the season.     

Lipid and fatty acid composition during embryo and larval development of puye Galaxias maculatus Jenyns, 1842, obtained from estuarine, freshwater and cultured populations

Galaxias maculatus eggs and larvae obtained from broodfish captured either in an estuarine or a freshwater environment, as well as from cultured broodstock were analysed to compare their lipid and fatty acid profiles. Results showed a lower lipid content in embryos and larvae from estuarine populations than those from fresh water, denoting the influence of environmental conditions. The n-3:n-6 ratio was higher in eggs from estuarine and cultured populations, being in the range of marine fishes, whereas for eggs from freshwater fish was lower and typical of freshwater fishes. The polyunsaturated fatty acids (PUFA), particularly docosahexaenoic acid (22:6n-3) and eicosapentaenoic acid (20:5n-3), were higher in eggs and larvae of broodstock coming from culture or estuarine environments than in those from fresh water. Moreover, these fatty acids markedly increased after hatching in larvae coming from estuarine populations, suggesting the effect of the environment on fatty acid profiles to physiologically prepare the larvae to adapt to higher salinity conditions. Linoleic acid (18:2n-6) content was higher in fresh water fish and its reduction during embryo and larval development was accompanied by a significant increase of arachidonic acid (20:4n-6), which was not observed in embryos or larvae from broodstock fish from estuary or aquaculture origin. Both environment and diet of broodstock fish affected lipid and fatty acid composition of G. maculatus embryo and larvae as well as their changes during development.     

Effects of global climate change on marine and estuarine fishes and fisheries

Global climate change is impacting and will continue to impact marine and estuarine fish and fisheries. Data trends show global climate change effects ranging from increased oxygen consumption rates in fishes, to changes in foraging and migrational patterns in polar seas, to fish community changes in bleached tropical coral reefs. Projections of future conditions portend further impacts on the distribution and abundance of fishes associated with relatively small temperature changes. Changing fish distributions and abundances will undoubtedly affect communities of humans who harvest these stocks. Coastal-based harvesters (subsistence, commercial, recreational) may be impacted (negatively or positively) by changes in fish stocks due to climate change. Furthermore, marine protected area boundaries, low-lying island countries dependent on coastal economies, and disease incidence (in aquatic organisms and humans) are also affected by a relatively small increase in temperature and sea level. Our interpretations of evidence include many uncertainties about the future of affected fish species and their harvesters. Therefore, there is a need to research the physiology and ecology of marine and estuarine fishes, particularly in the tropics where comparatively little research has been conducted. As a broader and deeper information base accumulates, researchers will be able to make more accurate predictions and forge relevant solutions.     

Natural distinction of carbon and nitrogen isotopic niches in common fish species across marine biotopes in the Yellow River estuary

Stable isotope analysis is a universally recognized and efficient method of indicating trophic relationships that is widely applied in research. However, variation in stable isotope ratios may lead to inaccuracies due to the effects of complex environmental conditions. This research compared the carbon and nitrogen isotopic niches of fish communities between diverse biotopes around the Yellow River estuary and adjacent sea areas, with the aim of revealing distinctions in stable isotopic niche metrics, trophic positions, and feeding preferences. Our analysis of the food source contribution indicated that allochthonous sources were considered major energy sources in estuarine areas directly affected by Yellow River‐diluted water, while autochthonous benthic and pelagic producers dominated carbon input into the food web in Laizhou Bay and the open water. A significant variation in the fish δ¹⁵N characteristic was found within estuarine adjacent regions, so, together with the results from previous studies, we deemed the local high concentration of dissolved inorganic nitrogen as the original trigger of the abnormal δ¹⁵N characteristic in fishes via a transport process along food chains. These results provide a new perspective on the natural distinction of carbon and nitrogen isotopic niches. The detailed data reported here enhance our understanding of variations in fish communities in estuarine ecosystems.     

长江口中华鲟自然保护区潮间带鱼类群落结构

为深入了解鱼类对潮间带水域的利用,2010年5月、8月、11月在长江口中华鲟自然保护区潮间带水域进行了插网调查。结果表明:调查期间共出现28种鱼类,隶属于10目16科,鲤形目种类最多,其次为鲈形目;群落优势种为中国花鲈(Lateolabrax maculates)、鮻(Liza haematocheila)和窄体舌鳎(Cynoglossus gracilis);长江口中华鲟自然保护区潮间带鱼类群落可以分为河口定居鱼类、海洋偶见鱼类、降海洄游鱼类、溯河洄游鱼类、海洋洄游鱼类和淡水鱼类6种生态类群,其中河口定居鱼类和海洋洄游鱼类占据明显优势。对调查水域鱼类群落进行聚类分析,结果表明秋季和春夏季差异显著,鮻、中国花鲈、斑尾刺虾虎鱼(Acanthogobius ommaturus)是对季节差异贡献最大的3种鱼类。主成分分析结果表明,夏季鱼类群落主要受到海洋洄游鱼类的影响,而秋季主要受到河口定居鱼类的影响,这2种鱼类的幼鱼在不同季节利用潮间带水域索饵肥育可能是造成季节差异的主要原因。     

长江口中华鲟自然保护区底层鱼类的群落结构特征

根据2004年8月、11月和2005年2月(Ⅰ年度)、2005年8月、11月和2006年2月、5月(Ⅱ年度)、2007年8月、11月和2008年2月和5月(Ⅲ年度)对长江口中华鲟自然保护区15个站位点的底拖网调查数据,对该水域的底层鱼类群落结构特征及时间和空间变化规律进行了分析。结果表明,调查中捕获底层鱼类42种,隶属于13目24科39属。底层鱼类的种类组成和群落结构进行聚类分析,15个站位聚合成两大类群,类群A位于南支北港和北港北沙近东滩水域,共出现20种底层鱼类,主要以淡水性和河口性鱼类为主;类群B位于北支和北港北沙近外海水域,共出现鱼类39种,主要以河口性和海洋性鱼类为主。ANOSIM和SIMPER分析表明底层鱼类群落结构不同季节间差异显著,造成这种趋势的主要原因可能是与棘头梅童鱼(Collichthys lucidus)和凤鲚(Coilia mystus)的繁殖和索饵洄游有关。     

Do fish larvae have advantages over adults and other components for assessing estuarine ecological quality?

Using a novel approach to the assessment of ecological quality status of estuarine ecosystems, this study hypothesizes that compared to adult fishes and other components, the younger fish stages will be more sensitive and act as an early warning and will reflect more effectively the ecological status of estuaries. Larval stages of fishes were used to assess the ecological quality status (EQS) of four NW Portuguese estuaries, with different types and magnitudes of human pressures. The larval fish assemblages, together with water column characteristics and pollution indicators (faecal contamination and nutrient load) were sampled in the Lima, Cávado, Ave and Douro estuaries, during spring and autumn 2009. The four estuaries were classified in terms of human pressures by a global pressure index that identified the Cávado estuary as the least impacted estuary, followed by the Ave and Lima, both classified as moderately impacted system, while the Douro was classified as a highly impacted system. The Ave emerged as the most polluted system, carrying the highest nutrient load and sewage contamination. Larval fish assemblages included estuarine species, marine migrants, marine stragglers and the larger estuaries had higher species richness. Compared to adult fishes, three multimetric fish-based indices classified the Cávado, Ave and Douro estuaries with a lower ecological status when fish larvae were used. Similarly, the EQS assessed by macroinvertebrates were equal or higher when compared with fish larvae results. The EQS assessed by fish larvae was negatively correlated with sewage contamination and nitrogen nutrients, but did not reflect other anthropogenic pressures expressed by the global pressure index, which was only detected by adult fish. Fish larvae assessments were able to detect short-time events of hydrological manipulations observed in the Cávado estuary, as well as a seasonal decrease of water quality especially evident in the Ave estuary. The indices used denoted some limitations to the use of fish larvae data, thus emphasising the need for new indices to test the observed tendency for lower EQS given by fish larvae. The advantages and disadvantages of using fish larvae as more sensitive and accurate bioindicators of ecosystem integrity is also discussed as a means of providing strategically important information for improved estuarine management.     

Geographical and typological changes in fish guilds of South African estuaries

A comparative analysis of fish estuary association guilds was undertaken on some 190 South African estuaries. This pioneering study spanned three zoogeographic regions and included three broad estuarine types. The guild compositions of the estuaries were compared based on an importance value, incorporating taxonomic composition, numerical abundance and relative biomass. Multivariate analyses included both inter‐regional (zoogeographic) and intra‐regional (estuarine typology) comparisons. The major estuary‐associated guilds (estuarine species and marine migrant species) were important in all estuary types within all biogeographic regions. Significant differences both between regions and between estuary types within regions, however, were recorded. Cool–temperate estuaries were generally dominated by migratory species (estuarine migrants and marine migrant opportunists) while the importance of species dependent on estuaries (estuarine residents and estuarine‐dependent marine migrants) was higher in warm–temperate and subtropical regions. The significance of estuarine nursery areas, particularly in regions where estuaries are few in number, is highlighted. In terms of typology, migratory species assumed a greater importance in predominantly open systems, while freshwater and estuarine‐resident species were more important in predominantly closed systems. Predominantly closed estuaries, however, were also important for marine migrant species, which further highlights the significance of these systems as nursery areas for fishes.     

The icthyofauna of the Mhlathuze coastal lakes: some preliminary results

The fish faunas of the four Mhlathuze coastal lakes and the lower river comprise a diverse assortment of over fifty marine, estuarine and freshwater species. Three freshwater species are endemic to KwaZulu-Natal and nine estuarine species are endemic to southern Africa. Five species are of conservation significance. Species numbers in Lakes Mzingazi and Cubhu are similar historically and both lakes served as secondary nursery habitats for estuarine associated fishes. This role has been impacted by the construction of weirs at their outlets which prevent successful recruitment of estuarine species, especially during drought years when lake water levels are low. The fish faunas of Lakes Nsezi and Mangeza are depauperate and lack marine or estuarine components. In order that these systems fulfil their potential function as secondary nursery habitats to many estuarine fish species, minimum lake water levels must be set to ensure sufficient outflows at proposed fish ladders during critical spawning and migration times.     

Mitochondrial DNA phylogeography reveals the existence of an Evolutionarily Significant Unit of the sand goby Pomatoschistus minutus in the Adriatic (Eastern Mediterranean)

The sand goby Pomatoschistus minutus is a major component of marine shelf and estuarine food webs and an important study organism in behavioural research. Yet, despite the sand goby's significance, its past and present patterns of migration and gene flow are poorly understood. Here we use the mtDNA control region and parts of the flanking tRNA genes of 63 fish from six localities in the Adriatic (Eastern Mediterranean), Western Mediterranean, Atlantic, and North Sea to investigate the phylogeography of this gobiid. Phylogenetic analyses and population genetics statistics reveal the existence of an Evolutionarily Significant Unit, sensu Moritz (1994), in the Adriatic and another in the Western Mediterranean, Atlantic, and North Sea. A possible biogeographical scenario for the separation of the ancestral population is that sand gobies in the Adriatic and Western Mediterranean split between 10,000 and 5000 years ago when due to the rise in sea temperature they migrated northwards and were bisected by the Italian peninsula. A testable prediction of this scenario is that sand gobies from the Western Mediterranean, Adriatic, and Aegean form three reciprocally monophyletic groups which are the descendants of a three-way diversification event.