Nitrification and denitrification in a midwestern stream containing high nitrate: in situ assessment using tracers in dome-shaped incubation chambers

The extent to which in-stream processes alter or remove nutrient loads in agriculturally impacted streams is critically important to watershed function and the delivery of those loads to coastal waters. In this study, patch-scale rates of in-stream benthic processes were determined using large volume, open-bottom benthic incubation chambers in a nitrate-rich, first to third order stream draining an area dominated by tile-drained row-crop fields. The chambers were fitted with sampling/mixing ports, a volume compensation bladder, and porewater samplers. Incubations were conducted with added tracers (NaBr and either ¹⁵N[NO₃ ^?], ¹⁵N[NO₂ ^?], or ¹⁵N[NH₄ ⁺]) for 24–44 h intervals and reaction rates were determined from changes in concentrations and isotopic compositions of nitrate, nitrite, ammonium and nitrogen gas. Overall, nitrate loss rates (220–3,560 μmol N m^?2 h^?1) greatly exceeded corresponding denitrification rates (34–212 μmol N m^?2 h^?1) and both of these rates were correlated with nitrate concentrations (90–1,330 μM), which could be readily manipulated with addition experiments. Chamber estimates closely matched whole-stream rates of denitrification and nitrate loss using ¹⁵N. Chamber incubations with acetylene indicated that coupled nitrification/denitrification was not a major source of N₂ production at ambient nitrate concentrations (175 μM), but acetylene was not effective for assessing denitrification at higher nitrate concentrations (1,330 μM). Ammonium uptake rates greatly exceeded nitrification rates, which were relatively low even with added ammonium (3.5 μmol N m^?2 h^?1), though incubations with nitrite demonstrated that oxidation to nitrate exceeded reduction to nitrogen gas in the surface sediments by fivefold to tenfold. The chamber results confirmed earlier studies that denitrification was a substantial nitrate sink in this stream, but they also indicated that dissolved inorganic nitrogen (DIN) turnover rates greatly exceeded the rates of permanent nitrogen removal via denitrification.     

Net sediment N2 fluxes in a southern New England estuary: variations in space and time

Over the past three decades, Narragansett Bay has undergone various ecological changes, including significant decreases in water column chlorophyll a concentrations, benthic oxygen uptake, and benthic nutrient regeneration rates. To add to this portrait of change, we measured the net flux of N₂ across the sediment–water interface over an annual cycle using the N₂/Ar technique at seven sites in the bay for comparison with measurements made decades ago. Net denitrification rates ranged from about 10–90 μmol N₂–N m^?2 h^?1 over the year. Denitrification rates were not significantly different among sites and had no clear correlation with temperature. Net nitrogen fixation (?5 to ?650 μmol N₂–N m^?2 h^?1) was measured at three sites and only observed in summer (June–August). Neither denitrification nor nitrogen fixation exhibited a consistent relationship with sediment oxygen demand or with fluxes of nitrite, nitrate, ammonium, total dissolved inorganic nitrogen, or dissolved inorganic phosphate across all stations. In contrast to the mid-bay historical site where denitrification rates have declined, denitrification rates in the Providence River Estuary have not changed significantly over the past 30 years.     

Interaction of benthic microalgae and macrofauna in the control of benthic metabolism, nutrient fluxes and denitrification in a shallow sub-tropical coastal embayment (western Moreton Bay, Australia)

Benthic biogeochemistry and macrofauna were investigated six times over 1 year in a shallow sub-tropical embayment. Benthic fluxes of oxygen (annual mean ?918 μmol O₂ m^?2 h^?1), ammonium (NH₄ ⁺), nitrate (NO₃ ^?), dissolved organic nitrogen, dinitrogen gas (N₂), and dissolved inorganic phosphorus were positively related to OM supply (N mineralisation) and inversely related to benthic light (N assimilation). Ammonium (NH₄ ⁺), NO₃ ^? and N₂ fluxes (annual means +14.6, +15.9 and 44.6 μmol N m^?2 h^?1) accounted for 14, 16 and 53 % of the annual benthic N remineralisation respectively. Denitrification was dominated by coupled nitrification–denitrification throughout the study. Potential assimilation of nitrogen by benthic microalgae (BMA) accounted for between 1 and 30 % of remineralised N, and was greatest during winter when bottom light was higher. Macrofauna biomass tended to be highest at intermediate benthic respiration rates (?1,000 μmol O₂ m^?2 h^?1), and appeared to become limited as respiration increased above this point. While bioturbation did not significantly affect net fluxes, macrofauna biomass was correlated with increased light rates of NH₄ ⁺ flux which may have masked reductions in NH₄ ⁺ flux associated with BMA assimilation during the light. Peaks in net N₂ fluxes at intermediate respiration rates are suggested to be associated with the stimulation of potential denitrification sites due to bioturbation by burrowing macrofauna. NO₃ ^? fluxes suggest that nitrification was not significantly limited within respiration range measured during this study, however comparisons with other parts of Moreton Bay suggest that limitation of coupled nitrification–denitrification may occur in sub-tropical systems at respiration rates exceeding ?1,500 μmol O₂ m^?2 h^?1.     

Heterotrophic nitrification and aerobic denitrification by a novel Halomonas campisalis

A novel halophilic strain that could carry out heterotrophic nitrification and aerobic denitrification was isolated and named as Halomonas campisalis ha3. It removed inorganic nitrogen compounds (e.g. NO₃ ^?, NO₂ ^? and NH₄ ⁺) simultaneously, and grew well in the medium containing up to 20 % (w/v) NaCl. PCR revealed four genes in the genome of ha3 related to aerobic denitrification: napA, nirS, norB and nosZ. The optimal conditions for aerobic denitrification were pH 9.0, at 37 °C, with 4 % (w/v) NaCl and sodium succinate as carbon source. The nitrogen removal rate was 87.5 mg NO₃ ^?–N l^?1 h^?1. Therefore, this strain is a potential aerobic denitrifier for the treatment of saline wastewater.     

Denitrification and nitrous oxide effluxes in boreal, eutrophic river sediments under increasing nitrate load: a laboratory microcosm study

Intact sediment cores from rivers of the Bothnian Bay (Baltic Sea) were studied for denitrification based on benthic fluxes of molecular nitrogen (N₂) and nitrous oxide (N₂O) in a temperature controlled continuous water flow laboratory microcosm under 10, 30, 100, and 300 μM of ¹⁵N enriched nitrate (NO₃ ^?, ~98 at. %). Effluxes of both N₂ and N₂O from sediment to the overlying water increased with increasing NO₃ ^? load. Although the ratio of N₂O to N₂ increased with increasing NO₃ ^? load, it remained below 0.04, N₂ always being the main product. At the NO₃ ^? concentrations most frequently found in the studied river water (10–100 μM), up to 8% of the NO₃ ^? was removed in denitrification, whereas with the highest concentration (300 μM), the removal by denitrification was less than 2%. However, overall up to 42% of the NO₃ ^? was removed by mechanisms other than denitrification. As the microbial activity was simultaneously enhanced by the NO₃ ^? load, shown as increased oxygen consumption and dissolved inorganic carbom efflux, it is likely that a majority of the NO₃ ^? was assimilated by microbes during their growth. The ¹⁵N content in ammonium (NH₄ ⁺) in the efflux was low, suggesting that reduction of NO₃ ^? to NH₄ ⁺ was not the reason for the NO₃ ^? removal. This study provides the first published information on denitrification and N₂O fluxes and their regulation by NO₃ ^? load in eutrophic high latitude rivers.     

Effects of urban stream burial on nitrogen uptake and ecosystem metabolism: implications for watershed nitrogen and carbon fluxes

Urbanization has resulted in the extensive burial and channelization of headwater streams, yet little is known about the impacts of stream burial on ecosystem functions critical for reducing downstream nitrogen (N) and carbon (C) exports. In order to characterize the biogeochemical effects of stream burial on N and C, we measured NO₃ ^? uptake (using ¹⁵N-NO₃ ^? isotope tracer releases) and gross primary productivity (GPP) and ecosystem respiration (ER) (using whole stream metabolism measurements). Experiments were carried out during four seasons, in three paired buried and open stream reaches, within the Baltimore Ecosystem Study Long-term Ecological Research site. Stream burial increased NO₃ ^? uptake lengths by a factor of 7.5 (p < 0.01) and decreased NO₃ ^? uptake velocity and areal NO₃ ^? uptake rate by factors of 8.2 (p < 0.05) and 9.6 (p < 0.001), respectively. Stream burial decreased GPP by a factor of 11.0 (p < 0.01) and decreased ER by a factor of 5.0 (p < 0.05). From fluorescence Excitation Emissions Matrices analysis, buried streams were found to have significantly altered C quality, showing less labile dissolved organic matter. Furthermore, buried streams had significantly lower transient storage (TS) and water temperatures. Differences in NO₃ ^? uptake, GPP, and ER in buried streams, were primarily explained by decreased TS, light availability, and C quality, respectively. At the watershed scale, we estimate that stream burial decreases NO₃ ^? uptake by 39 % and C production by 194 %. Overall, our results suggest that stream burial significantly impacts NO₃ ^? uptake, stream metabolism, and the quality of organic C exported from watersheds. Given the large impacts of stream burial on stream ecosystem processes, daylighting or de-channelization of streams, through hydrologic floodplain reconnection, may have the potential to alter ecosystem functions in urban watersheds, when used appropriately.     

Stable N isotope composition of nitrate reflects N transformations during the passage of water through a montane rain forest in Ecuador

Knowledge of the fate of deposited N in the possibly N-limited, highly biodiverse north Andean forests is important because of the possible effects of N inputs on plant performance and species composition. We analyzed concentrations and fluxes of NO₃ ^??CN, NH₄ ⁺?CN and dissolved organic N (DON) in rainfall, throughfall, litter leachate, mineral soil solutions (0.15?C0.30 m depths) and stream water in a montane forest in Ecuador during four consecutive quarters and used the natural ¹⁵N abundance in NO₃ ^? during the passage of rain water through the ecosystem and bulk ??¹⁵N values in soil to detect N transformations. Depletion of ¹⁵N in NO₃ ^? and increased NO₃ ^??CN fluxes during the passage through the canopy and the organic layer indicated nitrification in these compartments. During leaching from the organic layer to mineral soil and stream, NO₃ ^? concentrations progressively decreased and were enriched in ¹⁵N but did not reach the ??¹⁵N values of solid phase organic matter (??¹⁵N = 5.6?C6.7??). This suggested a combination of nitrification and denitrification in mineral soil. In the wettest quarter, the ??¹⁵N value of NO₃ ^? in litter leachate was smaller (??¹⁵N = ?1.58??) than in the other quarters (??¹⁵N = ?9.38 ± SE 0.46??) probably because of reduced mineralization and associated fractionation against ¹⁵N. Nitrogen isotope fractionation of NO₃ ^? between litter leachate and stream water was smaller in the wettest period than in the other periods probably because of a higher rate of denitrification and continuous dilution by isotopically lighter NO₃ ^??CN from throughfall and nitrification in the organic layer during the wettest period. The stable N isotope composition of NO₃ ^? gave valuable indications of N transformations during the passage of water through the forest ecosystem from rainfall to the stream.     

Assessing Nitrogen-Saturation in a Seasonally Dry Chaparral Watershed: Limitations of Traditional Indicators of N-Saturation

To evaluate nitrogen (N) saturation in xeric environments, we measured hydrologic N losses, soil N pools, and microbial processes, and developed an N-budget for a chaparral catchment (Sierra Nevada, California) exposed to atmospheric N inputs of approximately 8.5 kg N ha^?1 y^?1. Dual-isotopic techniques were used to trace the sources and processes controlling nitrate (NO₃ ^?) losses. The majority of N inputs occurred as ammonium. At the onset of the wet season (November to April), we observed elevated streamwater NO₃ ^? concentrations (up to 520 µmol l^?1), concomitant with the period of highest gaseous N-loss (up to 500 ng N m^?2 s^?1) and suggesting N-saturation. Stream NO₃ ^? δ¹⁵N and δ¹⁸O and soil N measurements indicate that nitrification controlled NO₃ ^? losses and that less than 1% of the loss was of atmospheric origin. During the late wet season, stream NO₃ ^? concentrations decreased (to <2 µmol l^?1) as did gaseous N emissions, together suggesting conditions no longer indicative of N-saturation. We propose that chaparral catchments are temporarily N-saturated at ≤8.5 kg N ha^?1 y^?1, but that N-saturation may be difficult to reach in ecosystems that inherently leak N, thereby confounding the application of N-saturation indicators and annual N-budgets. We propose that activation of N sinks during the typically rainy winter growing season should be incorporated into the assessment of ecosystem response to N deposition. Specifically, the N-saturation status of chaparral may be better assessed by how rapidly catchments transition from N-loss to N-retention.     

Pelagic nitrification and denitrification rates in an Arctic fjord during early spring

This study addresses factors governing nitrification and denitrification rates, along with the abundance of the bacterial groups likely involved in these activities, in Kongsfjorden, an Arctic fjord at Ny-Ålesund, Svalbard. The fjord was sampled three times during the month of March 2008 as day length and direct solar radiation increased. Although initially well mixed, cooler and more saline, the fjord became stratified, warmer and less saline during late March. The concentrations of NH₄ ⁺ (4.4?±?1.6 to 6?±?1.6 μM) and NO₂ ^? (1?±?0.3 to 1.2?±?0.4 μM) increased progressively with the decrease in NO₃ ^? (6.1?±?1.3 to 3.8?±?1.5 μM), reflecting the onset of primary productivity. Nitrification rates and the culturable population of nitrifiers decreased significantly from 1.6?±?0.9 to 0.4?±?0.1 ng at NH₄ ⁺-N l^?1 h^?1 and 5.1?±?0.3?×?10² to 29?±?14 cells l^?1, respectively. In contrast, denitrification rates increased (2.4?±?0.5 to 4.6?±?1.3 ng-at NO₃ ^?-N l^?1 h^?1), although the abundance of culturable denitrifiers did not vary significantly. A significant correlation of nitrifiers with NO₃ ^? during early March (p?<?0.01, r?=?0.51) indicated that nitrifiers may play an important role in regulating the NO₃ ^? pool and thereby in controlling the abundance of denitrifiers. However, the contribution of nitrification to the total NO₃ ^? pool decreased with time. Experimental simulations were also set up to understand the impact of change in duration of light and progressive increase in temperature on these processes. The application of 24 h light inhibited nitrification, suggesting that during peak Arctic summer the contribution of nitrification to the nitrate pool is minimal. It was also observed that a brief exposure to light (≤6 h) was enough to hamper nitrification rates. Experimental simulations suggested that a gradual increase in temperature in the fjord may enhance the magnitude of nitrification and denitrification in the fjord.     

Seasonal and geomorphic controls on N and P removal in riparian zones of the US Midwest

Riparian zones are an important strategy to mitigate N and P export to streams. However, their efficiency with respect to nitrate (NO₃ ^?), ammonium (NH₄ ⁺), or soluble reactive phosphorus (SRP) in groundwater remains uncertain in the US Midwest. This study investigates water table fluctuations and NO₃ ^?, NH₄ ⁺, and SRP concentration dynamics in two riparian zone types (outwash vs. glacial till) common in the upper US Midwest. During low water table periods, NO₃ ^? removal was 93 % at WR (outwash site), and 75 % at LWD (glacial till site); but during high water table periods, NO₃ ^? removal efficiencies dropped to 50 % at WR, and 14 % at LWD. Median seasonal mass fluxes of NO₃ ^? removed at WR (9.4–21.7 mg N day^?1 m^?1 of stream length) and LWD (0.4–1.9 mg N day^?1 m^?1) were small compared to other riparian zones in glaciated landscapes. The WR site was a small SRP sink (0.114 and 0.118 mg day^?1 m^?1 during the dry period and wet period, respectively), while LWD acted as a small SRP source to the stream (0.004 mg day^?1 m^?1 during the dry period; 0.075 mg day^?1 m^?1 during the wet period). Both LWD and WR acted as sources of NH₄ ⁺ to the stream with mass fluxes ranging from 0.17 to 7.75 mg N day^?1 m^?1. Although riparian zones in the US Midwest provide many ecosystem services, results suggest they are unlikely to efficiently mitigate N and P pollution in subsurface flow.     

Influence of bioturbation on denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in freshwater sediments

Intensive agriculture leads to increased nitrogen fluxes (mostly as nitrate, NO₃ ^?) to aquatic ecosystems, which in turn creates ecological problems, including eutrophication and associated harmful algal blooms. These problems have focused scientific attention on understanding the controls on nitrate reduction processes such as denitrification and dissimilatory nitrate reduction to ammonium (DNRA). Our objective was to determine the effects of nutrient-tolerant bioturbating invertebrates (tubificid oligochaetes) on nitrogen cycling processes, specifically coupled nitrification–denitrification, net denitrification, DNRA, and biogeochemical fluxes (O₂, NO₃ ^?, NH₄ ⁺, CO₂, N₂O, and CH₄) in freshwater sediments. A mesocosm experiment determined how tubificid density and increasing NO₃ ^? concentrations (using N¹⁵ isotope tracing) interact to affect N cycling processes. At the lowest NO₃ ^? concentration and in the absence of bioturbation, the relative importance of denitrification to DNRA was similar (i.e., 49.6 and 50.4 ± 8.1 %, respectively). Increasing NO₃ ^? concentrations in the control cores (without fauna) stimulated denitrification, but did not enhance DNRA, which significantly altered the relative importance of denitrification compared to DNRA (94.6 vs. 5.4 ± 0.9 %, respectively). The presence of tubificid oligochaetes enhanced O₂, NO₃ ^?, NH₄ ⁺ fluxes, greenhouse gas production, and N cycling processes. The relative importance of denitrification to DNRA shifted towards favoring denitrification with both the increase in NO₃ ^? concentrations and the increase of bioturbation activity. Our study highlights that understanding the interactions between nutrient-tolerant bioturbating species and nitrate contamination is important for determining the nitrogen removal capacity of eutrophic freshwater ecosystems.     

Influence of Potamogeton pectinatus and microphytobenthos on benthic metabolism,nutrient fluxes and denitrification in a freshwater littoral sediment in an agricultural landscape: N assimilation versus N removal

The influence of Potamogeton pectinatus colonisation on benthic nitrogen dynamics was studied in the littoral zone of a lowland pit lake with high nitrate concentration (~200 μM). Our hypothesis was that in aquatic environments where nitrogen availability is not limiting, colonisation by rooted macrophytes changes the dynamics of the benthic nitrogen cycle, stimulating N assimilation and denitrification and increasing the system capacity to take up external nitrogen loads. To test this hypothesis, we quantified and compared seasonal variations of light and dark benthic metabolism, dissolved inorganic nitrogen (DIN) fluxes, denitrification and N assimilation rates in an area colonised by P. pectinatus and a reference site colonised by microphytobenthos. In both areas, the benthic system was net autotrophic and a sink for DIN (2,241–2,644 mmol m^?2 y^?1). Plant colonisation increased nitrogen losses via denitrification by 30% compared to the unvegetated area. In contrast to what is generally observed in coastal marine systems, where the presence of rooted macrophytes limits denitrification rates, under the very high nitrate concentrations in the studied lake, both denitrification (1,237–1,570 mmol m^?2 y^?1) and N assimilation (1,039–1,095 mmol m^?2 y^?1) played important and comparable roles in the removal of DIN from the water column.     

Nutrient uptake and primary productivity in an urban estuary: using rate measurements to evaluate phytoplankton response to different hydrological and nutrient conditions

The northern San Francisco Estuary (nSFE) is an urban estuary supplied with anthropogenic nutrient inputs, yet spring blooms are uncommon and phytoplankton biomass is low. The low levels of chlorophyll (<5 µg L^?1) have likely contributed to declines in several native fishes, and there is a need to evaluate the conditions that could allow for increased phytoplankton. Increased ammonium (NH₄) loads have been hypothesized to modulate the magnitude of blooms in nSFE (the “NH₄ hypothesis”) as a result of inhibition of phytoplankton NO₃ uptake that limits access to the greater nitrogen (N) pool of nitrate (NO₃). This hypothesis, tested in enclosures, but not in the field until now, is that lack of access to NO₃ limits primary production and consequently the accumulation of chlorophyll. Here, we test this in the field with the following aims: (1) to observe the uptake response of phytoplankton in different flow and N loading conditions, (2) determine whether the sequence of uptake rates suggested by the “NH₄ hypothesis” occurs and (3) obtain depth-integrated nutrient uptake rates to better constrain published criteria for bloom formation. Weekly measurements of NH₄ and NO₃ uptake, and primary production rates were made during spring 2011–2012, along with nutrient and chlorophyll concentrations during two contrasting hydrological conditions of high vs low freshwater flow. In conditions with high freshwater flow (maximum of 2405 m³ s^?1), there were lower nutrient concentrations than with low/normal flows (e.g., NO₃ of 10 µmol L^?1 compared to 30 µmol L^?1), with low N uptake and primary production rates. With low flow (maximum of 1304 m³ s^?1), there was elevated chlorophyll and blooms occurred, especially in shallow well-lit shoals where chlorophyll reached 60 µg L^?1. The higher levels of chlorophyll and primary productivity resulted from uptake of ambient NO₃ by phytoplankton, and f-ratios >0.5. This was enabled by phytoplankton uptake of NH₄ to below inhibitory levels, as proposed by the “NH₄ hypothesis.” The depth-integrated uptake rate data were used to refine a model that yields flow and nutrient concentration criteria necessary for bloom formation and confirmed that washout flows were the most useful predictor of blooms. Understanding the interaction of phytoplankton biomass with nutrient variability requires evaluating changes in C and N uptake rates and river flow. These dynamic changes are central to understanding why some urban estuaries have lower productivity than expected, and would be difficult to evaluate using biomass data alone. This study points to the importance of treating inorganic N separately as NH₄ and NO₃ rather than lumping together as DIN and to use rate process data as a mechanistic way to understand, predict and minimize cultural eutrophication impacts.     

Cooperation of Three Denitrifying Bacteria in Nitrate Removal of Acidic Nitrate- and Uranium-Contaminated Groundwater

In uranium-contaminated aquifers co-contaminated with nitrate, denitrifiers play a critical role in bioremediation. Six strains of denitrifying bacteria belonging to Rhizobium, Pseudomonas, and Castellaniella were isolated from the Oak Ridge Integrated Field Research Challenge Site (OR-IFRC), where biostimulation of acidic (pH 3.5–6.5), nitrate-contaminated (up to 140 mM) groundwater occurred. Three isolates were characterized in regards to nitrite tolerance, denitrification kinetic parameters, and growth on different denitrification intermediates. Kinetic and growth experiments showed that Pseudomonas str. GN33#1 reduced NO^? ₃ most rapidly (V_max = 15.8 μmol e^?·min^?1·mg protein^?1) and had the fastest generation time (gt) on NO^? ₃ (2.6 h). Castellaniella str. 4.5A2 was the most low pH and NO^? ₂ tolerant and grew rapidly on NO^? ₂ (gt = 4.0 h). Rhizobium str. GN32#2 was also tolerant of low pH values and reduced NO^? ₂ rapidly (V_max = 10.6 μmol e^?·min^?1·mg protein^?1) but was far less NO^? ₂ tolerant than Castellaniella str. 4.5A2. Growth of and denitrification by these three strains incubated together and individually were measured in OR-IFRC groundwater at pHs 5 and 7 to determine whether they cooperate or compete during denitrification. Mixed assemblages reduced NO^? ₃ more rapidly and more completely than any individual isolate over the course of the experiment. The results described in this article demonstrate 1) that this synthetic assemblage comprised of three physiologically distinct denitrifying bacterial isolates cooperate to achieve more complete levels of denitrification and 2) the importance of pH- and nitrite-tolerant bacteria such as Castellaniella str. 4.5A2 in minimizing NO^? ₂ accumulation in high-NO^? ₃ groundwater during bioremediation. Supplemental materials are available for this article. Go to the publisher's online edition of Geomicrobiology Journal to view the free supplemental files.     

Can thallus color of red algae be used as an environmental indicator in shallow waters?

Red algae sometimes turn yellow, but few studies have been conducted on the yellowing of subtidal bed-forming species and on the relationship between the color and environmental factors. We examined the seasonal changes in thallus color of macroscopic subtidal red algae and nutrient levels as in shallow waters at two sites: Hirasawa (0 to 3 m in depth) and Okinoshima Island (0 to 6 m in depth), central Pacific coast of Japan from April 2011 to March 2012. Yellowed red algae were found at all depths of the two sites. At Hirasawa, the ratio of yellowed species among the red algae (yellowing ratio, YR) calculated with data on a total of 23 species (3 to 14 species month^?1) was high in months in which nitrate nitrogen (NO₃-N) was low (1.73 to 2.19 μmol L^?1); in months with higher NO₃-N (5.91 to 6.01 μmol L^?1), YR was 0 but exceptionally high in April probably because of the duration of fine days. At Okinoshima Island, YR calculated with data on a total of 40 species (3 to 22 species month^?1) was high from March to July (except May), in which NO₃-N was low (0.93 to 2.16 μmol L^?1), but low from October to February among the months with higher NO₃-N (4.56 to 5.62 μmol L^?1). Totally, YR was negatively correlated with nitrate concentrations and NO₃-N, which supports the possibility to use the value of YR as an indicator of nitrogen level although attention should also be paid to light conditions.     

The effect of nutrient concentrations,nutrient ratios and temperature on photosynthesis and nutrient uptake by Ulva prolifera: implications for the explosion in green tides

The green-tide macroalga, Ulva prolifera, was tested in the laboratory to determine its nutrient uptake and photosynthesis under different conditions. In the nutrient concentration experiments U. prolifera showed a saturated uptake for nitrate but an escalating uptake in the tested range for phosphorus. Both N/P and NO₃ ^?/NH₄ ⁺ ratios influenced nutrient uptake significantly (p?<?0.05) while the PSII quantum yield [Y(II)] (p?>?0.05) remained unaffected. The maximum N uptake rate (33.9?±?0.8 μmol g^?1 DW h^?1) and P uptake rate (11.1?±?4.7) was detected at N/P ratios of 7.5 and 2.2, respectively. U. prolifera preferred NH₄ ⁺-N to NO₃ ^?-N when the NO₃ ^?-N/NH₄ ⁺-N ratio was less than 2.2 (p?<?0.05). But between ratios of 2.2 and 12.9, the uptake of NO₃ ^?-N surpassed that of NH₄ ⁺-N. In the temperature experiments, the highest N uptake rate and [Y(II)] were observed at 20 °C, while the lowest rates were detected at 5 °C. P uptake rates were correlated with increasing temperature.     

Effects of floating vegetation on denitrification,nitrogen retention,and greenhouse gas production in wetland microcosms

Wetlands are biogeochemical hotspots that have been identified as important sites for both nitrogen (N) removal from surface waters and greenhouse gas (GHG) production. Floating vegetation (FV) commonly occurs in natural and constructed wetlands, but the effects of such vegetation on denitrification, N retention, and GHG production are unknown. To address this knowledge gap, we used microcosm experiments to examine how FV affects N and GHG dynamics. Denitrification and N retention rates were significantly higher in microcosms with FV (302 μmol N m^?2 h^?1 and 203 μmol N m^?2 h^?1, respectively) than in those without (63 μmol N m^?2 h^?1 and 170 μmol N m^?2 h^?1, respectively). GHG production rates were not significantly different between the two treatments. Denitrification rates were likely elevated due to decreased dissolved oxygen (DO) in microcosms with FV. The balance of photosynthesis and respiration was more important in affecting DO concentrations than decreased surface gas exchange. The denitrification fraction (N₂-N production: N retention) was higher in microcosms with FV (100 %) than those without (33 %) under increased (tripled) N loading. A 5 °C temperature increase resulted in significantly lower denitrification rates in the absence of FV and significantly lowered N₂O production with FV, but did not significantly change CH₄ production or N retention in either treatment. These results suggest that intentional introduction of FV in constructed wetlands could enhance N removal while leaving GHG production unchanged, an insight that should be further tested via in situ experiments.     

Effects of nitrate concentration on the denitrification potential of a calcic cambisol and its fractions of N2, N2O and NO

Background and aims

The direct measurement of denitrification dynamics and its product fractions is important for parameterizing process-oriented model(s) for nitrogen cycling in various soils. The aims of this study are to a) directly measure the denitrification potential and the fractions of nitrogenous gases as products of the process in laboratory, b) investigate the effects of the nitrate (NO ₃ ^? ) concentration on emissions of denitrification gases, and c) test the hypothesis that denitrification can be a major pathway of nitrous oxide (N₂O) and nitric oxide (NO) production in calcic cambisols under conditions of simultaneously sufficient supplies of carbon and nitrogen substrates and anaerobiosis as to be found to occur commonly in agricultural lands.

Methods

Using the helium atmosphere (with or without oxygen) gas-flow-soil-core technique in laboratory, we directly measured the denitrification potential of a silt clay calcic cambisol and the production of nitrogen gas (N₂), N₂O and NO during denitrification under the conditions of seven levels of NO ₃ ^? concentrations (ranging from 10 to 250 mg N kg^?1 dry soil) and an almost constant initial dissolved organic carbon concentration (300 mg C kg^?1 dry soil).

Results

Almost all the soil NO ₃ ^? was consumed during anaerobic incubation, with 80–88 % of the consumed NO ₃ ^? recovered by measuring nitrogenous gases. The results showed that the increases in initial NO ₃ ^? concentrations significantly enhanced the denitrification potential and the emissions of N₂ and N₂O as products of this process. Despite the wide range of initial NO ₃ ^? concentrations, the ratios of N₂, N₂O and NO products to denitrification potential showed much narrower ranges of 51–78 % for N₂, 14–36 % for N₂O and 5–22 % for NO.

Conclusions

These results well support the above hypothesis and provide some parameters for simulating effects of variable soil NO ₃ ^? concentrations on denitrification process as needed for biogeochemical models.     

The effect of benthic sediments on dissolved nutrient concentrations and fluxes

The Ria Formosa is a meso-tidal coastal lagoon experiencing enhanced nutrient concentrations. Assessment of sediment–seawater interaction is essential if nutrient dynamics and the risk of eutrophication are to be fully understood. Pore water concentrations of dissolved inorganic and organic phosphorus, ammonium, nitrate and nitrite were determined in cores from six sites. Changes in nutrients concentrations were measured in intertidal pools on sand and mud between tides. Dissolved inorganic phosphorus (DIP) concentrations (~200 μmol l⁻¹) and effluxes (123 ± 14 μmol m⁻² h⁻¹) were greater from sand than mud (37 ± 10 μmol m⁻² h⁻¹), possibly due to the binding of P with the <63 μm fraction. NH₄⁺ effluxes were high outside the Anc?o Basin (821 ± 106 μmol m⁻² h⁻¹) and were associated with Enteromorpha sp. mats. The greatest NO₃⁻ efflux was from sediments near a salt marsh (170 ± 67 μmol m⁻² h⁻¹). These sediment fluxes of P were not sufficient to account for elevated P concentrations seen by other workers on the ebb tide from the Anc?o Basin. Intertidal pools were sinks for Dissolved Inorganic Nitrogen (DIN) and DIP over the 6 h exposure period. Thus, tidepools may be an important route of nutrients into sediments that enhances the effects of sediments on seawater nutrient concentrations.