Description of whistles of Irrawaddy dolphins (Orcaella brevirostris) from the waters of Matang,Peninsular Malaysia

The whistles of Irrawaddy dolphins (Orcaella brevirostris) from the waters of Matang, western Peninsular Malaysia are described. Duration, frequency and frequency modulation variables were measured from 163 whistles recorded using a broadband towed hydrophone. Irrawaddy dolphins produced whistles with a mean duration of 0.366 s (S.D. ± 0.217 s). The fundamental frequency of whistles extended from 3040 to 17,123 Hz with low levels of frequency modulation. These dolphins produced whistles that were comparable to those of conspecifics recorded from the waters of Kalimantan, but were generally different from the related Australian snubfin dolphin (O. heinsohni). They also differed from the whistles of the sympatric Indo-Pacific humpback dolphin (Sousa chinensis). Characteristics of Irrawaddy dolphin whistles may be useful in future passive acoustic monitoring studies to investigate differences in sympatric species and their habitat.     

Abundance and residency dynamics of the Indo-Pacific humpback dolphin,Sousa chinensis,in the Dafengjiang River Estuary,China

Robust population size estimates are essential for informing population conservation status. Residency dynamics show population habitat use through time. Population size of Indo-Pacific humpback dolphins (Sousa chinensis) has been extensively investigated in Chinese waters, but their residency dynamics are rarely known. Mark-recapture analysis based on photo-identification records was applied to humpback dolphins in the Dafengjiang River Estuary habitat, one of the key habitats in the northern Beibu Gulf, China. Movement analyses based on lagged identification rate indicated the humpback dolphins spent, on average, 78.5 days inside and 46.9 days outside the survey area. Within the study area, the humpback dolphin abundance was 83 identifiable dolphins. A total of 353–430 humpback dolphins, estimated by POPAN modeling, were involved in this fluid habitat-use dynamic. Robust Design analysis showed strong seasonality in humpback dolphin abundance and emigration probability, implying a movement- and habitat-use pattern likely associated with spatiotemporal distribution of oceanographic characteristics and prey occurrences. Population surveys and conservation measures currently conducted in Chinese waters seldom consider seasonality in movements between habitat patches, which can be addressed by genetic analyses across habitats and cross-matching photo-identification records among neighboring habitats.     

海南三亚一头死亡中华白海豚的形态学记录

On February 2,2015, a dead female Indo-Pacific humpback dolphin (Sousa chinensis) was found in the coastal water of Meilian Village, Yacheng Town, Sanya City, Hainan Province, China. It was the first Indo-Pacific humpback dolphin death case ever found in waters southwest of Hainan Island. In the present study, data about external morphology and skeleton system of the dead dolphin were documented, Body length and body mass of the animal were 235.0 cm and ca. 150 kg, respectively, with completely white body color. The cranium of this dolphin wa 189 mm in zygomatic width, and 415 mm in skull length. Its vertebra formula was C6+T12+L10+Ca20=48. It had 12 pairs of ribs and 11 V-bones. According to previous reports, our skeleton sample may have one cervical vertebra missing, and one or more caudal vertebras and V bones missing. More new skeleton samples from the same population are needed to confirm this presumption.     

厦门水域中华白海豚出现于围头湾

厦门海域的中华白海豚是一个受威胁的种群。以往有关该种群的调查范围主要集中在厦门以及邻近的南部漳州海域。为了获得厦门岛东部海域（包括晋江围头湾、小嶝岛以及大嶝岛部分水域）白海豚的分布和数量等信息,本文于2013年6—8月对该水域进行了船基样线法调查和照相识别研究。调查期间共目击到白海豚26群,照相识别白海豚个体27头。所有照相识别的白海豚个体均与厦门中华白海豚个体识别数据库中的个体匹配,表明厦门中华白海豚的分布区至少向东延伸至围头湾。本文白海豚遇见率为5.8群/100km和24.8头/100km,均要高于以往在厦门水域的调查结果,表明大嶝岛—围头湾水域是厦门中华白海豚的重要栖息地之一,值得优先保护和管理。     

Differences in acoustic signals from Delphinids in the western North Atlantic and northern Gulf of Mexico

Whistle characteristics were quantitatively compared between both geographically separated and neighboring populations of Atlantic spotted dolphins (Stenella frontalis), bottlenose dolphins (Tursiops truncatus), and pilot whales (Globicephala spp.) in U.S. waters to evaluate if intraspecific acoustic differences exist between groups. We compared nine whistle characteristics between continental shelf and offshore Atlantic spotted dolphins in the western North Atlantic and between northern Gulf of Mexico and western North Atlantic bottlenose dolphins and pilot whales using discriminant analysis. Offshore Atlantic spotted dolphin whistles were significantly different (Hotelling's T², P= 0.0003) from continental shelf whistles in high frequency, bandwidth, duration, number of steps, and number of inflection points. Atlantic bottlenose dolphin whistles were significantly different (Hotelling's T², P < 0.0001) from those in the Gulf of Mexico in duration, number of steps, and number of inflection points. There was no significant difference between pilot whale whistles in the two basins. The whistle differences indicate acoustic divergence between groups in different areas that may arise from geographic isolation or habitat separation between neighboring but genetically distinct populations of dolphins. This study supports the premise that acoustic differences can be a tool to evaluate the ecological separation between marine mammal groups in field studies.     

厦门湾中华白海豚潜在生态廊道识别及人类活动干扰评估

生态廊道具有维持或恢复生态连通性的功能，对于连接生物栖息地、保护物种多样性具有重要意义。现有的生态廊道研究主要集中于陆地，而海洋生态系统具有水体广泛连通、缺乏直观的景观斑块等特点，导致海洋生态廊道的研究成为长期以来的科学难题。以栖息地位于厦门湾的国家一级保护动物中华白海豚（Sousa chinensis）为对象，尝试基于物种分布模型和最小成本路径分析法建立海洋生态廊道的识别方法。研究采用物种分布模型识别厦门湾内中华白海豚的适宜生境分布区和节点，并利用模型产出的生境适宜性结果生成海洋中的阻力表面，模拟计算节点与节点间在阻力表面上的最小成本路径，从而生成物种扩散网络。研究结果显示，厦门湾中华白海豚的分布主要受到航道距离、到岸线距离和叶绿素浓度三项因素的影响，主要适宜生境位于西海域至九龙江口和大嶝海域。潜在的核心生态廊道面积93.19km²，次级生态廊道面积170.41km²，九龙江口-鼓浪屿南侧-黄厝-大小嶝岛沿线可能是厦门湾中华白海豚的主要迁移路线。在此基础上，从用海空间重叠和桥梁影响两方面开展了人类活动对廊道的干扰评估。评估结果显示旅游活动和航运活动可能是中华白海豚生态廊道的主要影响来源，其中核心廊道受旅游活动影响更大，次级廊道受航运活动的影响更大。此外，厦门岛北部的桥梁亦可能会影响中华白海豚生态廊道的连通性。研究创新性地提出了海洋生态廊道的空间定量化识别方法并成功应用于厦门湾中华白海豚研究，研究结果可为我国海洋生物多样性保护、海洋保护区的空间规划等领域提供新的科学工具。     

Assessing spatial patterns and density of a dolphin population through signature whistles

Some dolphin species produce signature whistles, which may allow the identification of individual dolphins using passive acoustic monitoring (PAM). Identifying individuals by their sounds may enhance the opportunities for monitoring and addressing biological and ecological questions about these species. Here, we explored the potential of signature whistles to investigate ecological aspects of a resident bottlenose dolphin population. Using a limited data set, with few individuals recognized by signature whistles, combined with spatial capture-recapture (SCR) methods, we investigated how effective such approach is describing spatial use patterns and estimating density for this population. The data were collected using 4–6 stationary bottom-moored recorders. Since only eight signature whistles were identified, our density estimate may represent a subset of the entire population. However, even with only a few signature whistles identified, our results confirmed the center of the core area used by these dolphins as the area with the highest encounter probability. In addition, our results provided evidence that these dolphins have the same spatial use pattern at night as during the day. This study shows that SCR analysis of signature whistle data can improve our ecological knowledge and understanding of dolphin populations.     

Whistle characteristics of common dolphins (Delphinus sp.) in the Hauraki Gulf,New Zealand

Quantifying the vocal repertoire of a species is critical for subsequent analysis of signal functionality, geographic variation, and social relevance. However, the vocalizations of free‐ranging common dolphins (Delphinus sp.) have not previously been described from New Zealand waters. We present the first quantitative analysis of whistle characteristics to be undertaken on the New Zealand population. Acoustic data were collected in the Hauraki Gulf, North Island from 28 independent dolphin group encounters. A total of 11,715 whistles were collected from 105.1 min of recordings. Seven whistle contours were identified containing 29 subtypes. Vocalizations spanned from 3.2 to 23 kHz, with most whistles occurring between 11 and 13 kHz. Whistle duration ranged from 0.01 to 4.00 s (mean ± SD; 0.27 ± 0.32). Of the 2,663 whistles analyzed, 82% have previously been identified within U.K. populations. An additional six contours, apparently unique to New Zealand Delphinus were also identified. Data presented here offer a first insight into the whistle characteristics of New Zealand Delphinus. Comparisons with previously studied populations reveal marked differences in the whistle frequency and modulation of the New Zealand population. Interpopulation differences suggest behavior and the local environment likely play a role in shaping the vocal repertoire of this species.     

Derivation and characterization of cell cultures from the skin of the Indo-Pacific humpback dolphin Sousa chinensis

The marine mammalian Indo-Pacific humpback dolphin, once widely lived in waters of the Indian to western Pacific oceans, has become an endangered species. The individual number of this dolphin has significantly declined in recent decades, which raises the concern of extinction. Direct concentration on laboratorial conservation of the genetic and cell resources should be paid to this marine species. Here, we report the successful derivation of cell lines form the skin of Indo-Pacific humpback dolphin. The cell cultures displayed the characteristics of fibroblast in morphology and grew rapidly at early passages, but showed obvious growth arrest at higher passages. The karyotype of the cells consisted of 42 autosomes and sex chromosomes X and Y. The immortalized cell lines obtained by forced expression of the SV40 large T-antigen were capable of proliferation at high rate in long-term culture. Immortalization and long-term culture did not cause cytogenetically observable abnormality in the karyotype. The cell type of the primary cultures and immortalized cell lines were further characterized as fibroblasts by the specific expression of vimentin. Gene transfer experiments showed that exogenetic genes could be efficiently delivered into the cells by both plasmid transfection and lentivirus infection. The cells derived from the skin of the Indo-Pacific humpback dolphin may serve as a useful in vitro system for studies on the effects of environmental pollutants and pathogens in habitats on the dolphin animals. More importantly, because of their high proliferation rate and susceptibility to lentivirus, these cells are potential ideal materials for generation of induced pluripotent stem cells.     

珠江口伶仃洋中华白海豚栖息地利用对海岸线等变迁的响应

沿岸鲸豚类栖息地易受人类活动的干扰，导致其分布和核心栖息地发生变化。珠江口-漠阳江口中华白海豚种群是目前所知全球范围内最大的种群，其中伶仃洋水域是其重要的栖息地。近年来，珠江口伶仃洋周边城市发展带来的人类活动增加，白海豚的生存压力日益增大，分析伶仃洋中华白海豚对栖息地环境变化的响应，研究对应的保护策略显得非常迫切。以多源陆地资源卫星Landsat为数据源，通过影像分析近43年珠江口伶仃洋围填海造成的海域流失，结合近20年来采用截线抽样法收集的海豚观测数据，运用含障碍核插值（Kernel interpolation with barriers）方法，分析白海豚的分布及核心栖息地的变化。结果显示：1986-2015年期间，研究区域内流失的海域面积为344.08km²；目击分布离人工海岸线的平均距离大于自然海岸线的平均距离，目击分布到自然海岸线和人工海岸线的平均距离均在减小，表明过去20年白海豚的栖息地使用选择发生了一些变化，被迫适应人类活动的干扰；1997-2016年白海豚的分布范围呈现先增加后减小，白海豚栖息地使用的重心偏向伶仃洋东部水域，核心栖息地趋向主航道和无人海岛附近水域萎缩，可能是海豚因海域食物资源减少而迫不得已的选择。不同时期，珠江口中华白海豚国家级自然保护区所覆盖的核心栖息地比例呈递减趋势，占比由79.9%下降到49.4%，当前有必要对保护区范围和功能区作出一些优化调整，以适应栖息地使用的变化格局。     

Molecular footprints of inshore aquatic adaptation in Indo-Pacific humpback dolphin (Sousa chinensis)

The Indo-Pacific humpback dolphin, Sousa chinensis, being a member of cetaceans, had fully adapted to inshore waters. As a threatened marine mammal, little molecular information available for understanding the genetic basis of ecological adaptation. We firstly sequenced and obtained the draft genome map of S. chinensis. Phylogenetic analysis in this study, based on the single copy orthologous genes of the draft genome, is consistent with traditional phylogenetic classification. The comparative genomic analysis indicated that S. chinensis had 494 species-specific gene families, which involved immune, DNA repair and sensory systems associated with the potential adaption mechanism. We also identified the expansion and positive selection genes in S. chinensis lineage to investigate the potential adaptation mechanism. Our study provided the potential insight into the molecular bases of ecological adaptation in Indo-Pacific humpback dolphin and will be also valuable for future understanding the ecological adaptation and evolution of cetaceans at the genomic level.     

Site fidelity and association patterns of Indo-Pacific humpback dolphins off the east coast of Zhanjiang,China

This study examined the population of Indo-Pacific humpback dolphins, Sousa chinensis, inhabiting the waters off the east coast of Zhanjiang, China. A total of 116 dolphins were identified during 147 boat-based surveys, completed between June 2005 and June 2007. Abundance estimates indicated that a small population of 268 dolphins (95% CI = 189–413) inhabited this coastal area. The sighting frequencies of identified dolphins varied between one and five when the 2006 and 2007 data were organized into six occasions. Twenty-three percent (27 individuals) of the cataloged dolphins were identified in more than one calendar year. The two animals (ZJ001, ZJ011) with the highest degree of site fidelity were present in the study area for a period of 23 months. The most frequently (15 times) sighted dolphin (ZJ046) was recorded in nine (56%) of the 16 months surveyed. This evidence indicates the interannual site fidelity of S. chinensis to the area off the eastern coast of Zhanjiang City. Range sizes of eight identified individuals calculated by the minimum convex polygon varied from 2.07 to 331.20 km². Associations between 34 individuals sighted at least three times and more than three times were measured by the half-weight index and SOCPROG program. The majority of these dolphins (80.57%) were not seen together during surveys and the mean association rate between dyads was low at 0.05. Temporal analyses for all the individuals were conducted using a lagged association rate. The results indicated a non-random social structure made by constant companions.     

Distribution and abundance of Indo‐Pacific humpback dolphins in Leizhou Bay,China

Abstract

The Indo‐Pacific humpback dolphin (Sousa chinensis) is under severe threat in Chinese waters. Only four small populations of this dolphin are known to survive in the East China Sea and South China Sea. We conducted exploratory surveys from June to September 2005, and found a population of humpback dolphins in Leizhou Bay. Thirty‐eight individuals were identified and catalogued, of which 26 were photographed and re‐identified on more than one occasion, and nine were sighted on five or more occasions each. Our preliminary estimate of the size of the Leizhou population is about 237 individuals, second only to the Pearl River estuary population. We suggest that Leizhou Bay has the potential to serve as a “humpback dolphin sanctuary” in Chinese waters.     

Whistle discrimination and categorization by the Atlantic bottlenose dolphin (Tursiops truncatus): a review of the signature whistle framework and a perceptual test

Dolphin whistles vary by frequency contour, changes in frequency over time. Individual dolphins may broadcast their identities via uniquely contoured whistles, "signature whistles." A recent debate concerning categorization of these whistles has highlighted the on-going need for perceptual studies of whistles by dolphins. This article reviews research on dolphin whistles as well as presenting a study in which a captive, female, adult bottlenose dolphin performed a conditional matching task in which whistles produced by six wild dolphins in Sarasota Bay were each paired with surrogate producers, specific objects/places. The dolphin subject also categorized unfamiliar exemplars produced by the whistlers represented by the original stimuli. The dolphin successfully discriminated among the group of whistles, associated them with surrogate producers, grouped new exemplars of the same dolphin's whistle together when the contour was intact, and discriminated among same-contour whistles produced by the same dolphin. Whistle sequences that included partial contours were not categorized with the original whistlers. Categorization appeared to be based on contour rather than specific acoustic parameters or voice cues. These findings are consistent with the perceptual tenets associated with the signature whistle framework which suggests that dolphins use individualized whistle contours for identification of known conspecifics.     

Vocalizations and Behaviour of Pacific Humpback Dolphins Sousa chinensis

Very little is known about the acoustic repertoire of the Pacific humpback dolphin Sousa chinensis . This study, off eastern Australia, used concurrent observations of surface behaviour and acoustic recordings to gain an insight into the behavioural significance of humpback dolphin vocalizations. Humpback dolphins exhibit five different vocalization categories: broad band clicks; barks; quacks; grunts; and whistles. Broad band clicks were high in frequency (8 kHz to > 22 kHz), were directly related to foraging behaviour and may play a role in social behaviour. Barks and quacks were burst pulse sounds (frequency: 0.6 kHz to > 22 kHz, duration: 0.1–8 s) and were associated with both foraging and social behaviour. The grunt vocalization is a low frequency narrow band sound (frequency 0.5–2.6 kHz, duration 0.06–2 s) and was only heard during socializing. There were 17 different types of whistles, ranging widely in frequency (0.9–22 kHz) and vocal structure (n=329). The predominant whistle types used by the groups were type 1 (46%) and type 2 (17%). Most whistles were heard during both socializing and foraging. The number of whistles recorded in a group increased significantly as the number of mother–calf pairs increased, suggesting that whistles may be used as contact calls. Few vocalizations were heard during either travelling or milling behaviours. Broad band clicks, barks and whistle type 1 were the only vocalizations recorded during either travelling or milling.     

Long‐range movement by Hector's dolphins provides potential genetic enhancement for critically endangered Maui's dolphin

For endangered populations with low genetic diversity, low levels of immigration could lead to genetic rescue, reducing the risk of inbreeding depression and enhancing chances of long‐term species survival. Our genetic monitoring of Maui's dolphins revealed the first contemporary dispersal of their sister subspecies, Hector's dolphin, from New Zealand's South Island into the Maui's dolphin distribution along ~300 km of the North Island's northwest coast. From 2010 to 2012, 44 individuals were sampled within the Maui's dolphin distribution, four of which were genetically identified as Hector's dolphins (two living females, one dead female, one dead male). We also report two Hector's dolphins (one dead female neonate, one living male) sampled along the North Island's southwest coast, outside the presumed range of either subspecies. Together, these records demonstrate long‐distance dispersal by Hector's dolphins (≥400 km) and the possibility of an unsampled Hector's dolphin population along the southwest coast of the North Island. Although two living Hector's dolphins were found in association with Maui's dolphins, there is currently no evidence of interbreeding between the subspecies. These results highlight the value of genetic monitoring for subspecies lacking distinctive physical appearances as such discoveries are not detected by other means, but have important conservation implications.     

Whistle variation in Mediterranean common bottlenose dolphin: The role of geographical,anthropogenic, social,and behavioral factors

The studies on the variation of acoustic communication in different species have provided insight that genetics, geographic isolation, and adaptation to ecological and social conditions play important roles in the variability of acoustic signals. The dolphin whistles are communication signals that can vary significantly among and within populations. Although it is known that they are influenced by different environmental and social variables, the factors influencing the variation between populations have received scant attention. In the present study, we investigated the factors associated with the acoustic variability in the whistles of common bottlenose dolphin (Tursiops truncatus), inhabiting two Mediterranean areas (Sardinia and Croatia). We explored which factors, among (a) geographical isolation of populations, (b) different environments in terms of noise and boat presence, and (c) social factors (including group size, behavior, and presence of calves), were associated with whistle characteristics. We first applied a principal component analysis to reduce the number of collinear whistle frequency and temporal characteristics and then generalized linear mixed models on the first two principal components. The study revealed that both geographic distance/isolation and local environment are associated with whistle variations between localities. The prominent differences in the acoustic environments between the two areas, which contributed to the acoustic variability in the first principal component (PC1), were found. The calf's presence and foraging and social behavior were also found to be associated with dolphin whistle variation. The second principal component (PC2) was associated only with locality and group size, showing that longer and more complex tonal sound may facilitate individual recognition and cohesion in social groups. Thus, both social and behavioral context influenced significantly the structure of whistles, and they should be considered when investigating acoustic variability among distant dolphin populations to avoid confounding factors.     

Bottlenose dolphins that forage with artisanal fishermen whistle differently

Acoustic communication is a taxonomically widespread phenomenon, crucial for social animals. We evaluate social sounds from bottlenose dolphins (Tursiops truncatus) of Laguna, southern Brazil, whose social structure is organized around a cooperative foraging tactic with artisanal fishermen. This tactic involves stereotyped and coordinated behaviour by dolphins and fishermen and is performed by a subset of the dolphin population, splitting it into two distinct social communities. We compared the acoustic parameters and type of whistles emitted by dolphins of the “non‐cooperative” and “cooperative” communities, both during their interactions with fishermen and in times where dolphins were engaged in other types of foraging. Our findings show how dolphins’ social sounds differ between foraging tactics and social communities. The frequencies of six whistle types (ascending, descending, concave, convex, multiple, flat) were significantly dependent on tactics and communities. Ascending whistles were more common than expected during foraging without fishermen, and among dolphins of the non‐cooperative community. Whistle acoustic parameters (duration, number of inclination changes and inflection points, and initial, final, maximum, minimum frequencies) also varied between social communities. In general, whistles emitted by cooperative dolphins, mainly when not interacting with fishermen, tended to be shorter, had higher frequency and more inflections than those emitted by non‐cooperative dolphins. These results suggest that different whistles may convey specific information among dolphins related to foraging, which we hypothesize promote social cohesion among members of the same social community. These differences in acoustic repertoires add a new dimension of complexity to this unique human–animal interaction.     

Fine‐scale habitat use in Indo‐Pacific humpback dolphins,Sousa chinensis,may be more influenced by fish rather than vessels in the Pearl River Estuary,China

Shifts in habitat use and distribution patterns in dolphins are often concerns that can result from habitat degradation. We investigated how potential changes to a habitat from human activity may alter dolphin distributions within Lingding Bay in the Pearl River Estuary, China, by studying the relationship between fish choruses, vessel presence and Indo‐Pacific humpback dolphin (Sousa chinensis) detection rates. Analyses revealed temporal and spatial variation within fish choruses, vessel presence and dolphin detection rates. After accounting for any temporal autocorrelation, correlations between fish choruses and dolphin detection rates were also found; however, no relationship between fish choruses and vessel presence or dolphin detection rates and vessel presence were observed. Furthermore, fewer dolphins were detected at sites where fish activity was less intense. Thus fish activity, rather than vessels, may be a key factor influencing the distribution of the dolphins within the estuary. These findings emphasize the risk of potential shifts in habitat use for Indo‐Pacific humpback dolphins due to detrimental changes to prey availability and dolphin feeding grounds from human activity, such as overfishing and coastal developments, within the estuary. This is a critical conservation issue for this dolphin population that is facing intense anthropogenic pressure.