A comparison of direct and indirect methods for measuring leaf and surface areas of individual bushes

Indirect estimates of leaf area from measurements with three commercially available instruments (DEMON, LAI-2000 and Sunfleck Ceptometer) were compared with directly measured areas of individual Retama sphaerocarpa bushes. The three indirect methods gave good estimates of the total surface area of individual bushes. For the DEMON, the method of log-linear averaging of transmitted radiation gave estimates closer to directly measured surface area than the method of averaging transmission linearly. For the LAI-2000, estimated surface area index multiplied by canopy projected area gave the best agreement with directly measured values. For measurements with the Sunfleck Ceptometer, values of surface area estimated from the transmission of photosynthetic quantum flux density, without correcting for diffuse radiation, gave the best agreement with directly measured values. Surface areas estimated by the three instruments were not significantly different from directly measured total (leaf + branch + stem) surface areas. Leaf surface area could be calculated from estimated total surface area minus directly measured branch surface area. Measured branch surface area was linearly related to canopy projected area.     

One-year survey of a single Micronesian reef reveals extraordinarily rich diversity of <Emphasis Type="Italic">Symbiodinium</Emphasis> types in soritid foraminifera

Recent molecular studies of symbiotic dinoflagellates (genus Symbiodinium) from a wide array of invertebrate hosts have revealed exceptional fine-scale symbiont diversity whose distribution among hosts, regions and environments exhibits significant biogeographic, ecological and evolutionary patterns. Here, similar molecular approaches using the internal transcribed spacer-2 (ITS-2) region were applied to investigate cryptic diversity in Symbiodinium inhabiting soritid foraminifera. Approximately 1,000 soritid specimens were collected and examined during a 12-month period over a 40 m depth gradient from a single reef in Guam, Micronesia. Out of 61 ITS-2 types distinguished, 46 were novel. Most types found are specific for soritid hosts, except for three types (C1, C15 and C19) that are common in metazoan hosts. The distribution of these symbionts was compared with the phylotype of their foraminiferal hosts, based on soritid small subunit ribosomal DNA sequences, and three new phylotypes of soritid hosts were identified based on these sequences. Phylogenetic analyses of 645 host-symbiont pairings revealed that most Symbiodinium types associated specifically with a particular foraminiferal host genus or species, and that the genetic diversity of these symbiont types was positively correlated with the genetic diversity found within each of the three host genera. Compared to previous molecular studies of Symbiodinium from other locations worldwide, the diversity reported here is exceptional and suggests that Micronesian coral reefs are home to a remarkably large Symbiodinium assemblage.     

Laminar elution of tubular organs for bioluminescence analysis of the interior cell layer

Cells lining the interior of tubular organs are of considerable interest from physiological and pathological aspects but are very difficult to prepare for biochemical analyses. The contents of such cells can be extracted by infusion of a suitable detergent serving as a membrane destroyer. The tiny ureter of the rat has been used as experimental model. Time governed elution with saponin, using a Hamilton programmable microlab for the infusion results in an effluent pattern which can be determined by sensitive bioluminescence assays. The time course of the outflux of nucleotides and enzymes showed two maxima in agreement with the presence of two epithelial layers in the ureter.     

Consequences of plant tissue cryopreservation (phenotype and genome)

The question about the correspondence of regenerants after cryopreservation to the initial organisms has long been in the focus of attention of cryobiologists. The correspondence has been established for morphological and physiological characteristics and the DNA composition in flower plants and algae. However, at least as many works point to some phenotypic changes and appearance of DNA polymorphism in representatives of both plant kingdoms. Changes in DNA methylation at cytosine after cryopreservation of flower plant tissues have attracted considerable interest. Thus, after freezing and thawing, changes in the phenotype and genome may occur, and the latter involve two mechanisms: mutations and modification of DNA methylation.