新城疫病毒HN和F基因遗传变异相关性的研究

选取国内1999~2005年发生的NDV毒株,经CEF蚀斑纯化和SPF鸡胚增殖,对其融合蛋白(F)和血凝素-神经氨酸酶(HN)基因分别进行克隆测序,结合在GenBank中发表的具有F和HN基因的NDV序列,利用DNAStar软件,对其不同毒株的F或HN基因片段和全长、F和HN基因全长分别进行遗传变异的研究,利用统计学软件SPSS8.0进行同源性相关分析。结果表明:不同NDV毒株F或HN基因片段与其全长之间,核甘酸r≥0.973,氨基酸:0.911≤r≤0.968,遗传变异高度相关,但F与HN基因全长之间核甘酸的遗传变异呈现弱相关(r=0.312)。国内NDV野毒株之间HN核甘酸高度同源(同源率97%以上),而与La Sota同源率仅为79.2%~80.7%,且显示出明显的地域性。

Newcastle disease virus heredity mutation and correlation of HN and F gene

Prevailed Newcastle disease virus isolates were collected during 1999-2005 in China. These isolates were purified by CEF plaque assay and replicated in SPF embryos. The fusion protein (F) gene and hemagglutinin-neuraminidase (HN) gene of these isolated viruses were cloned and sequenced. Some of the F gene and HN gene sequences from GenBank were also used in this study. The homologies of nucleotide and amino acids were compared and correlations were analyzed by SPSS8.0 software among different length sequences of the F gene or HN gene. The nucleotide homologies and correlation among the F gene and HN gene were also analyzed. The results indicated there are good correlation among different length sequences of the F gene or HN gene and the F genome or HN genome (r > or = 0.973). There was also good correlations among different length amino acids of NDV F protein or HN protein (0.911< or = r < or = 0.968). But, there was only a less correlation between the whole F gene and HN gene (r = 0.312). The heredity mutation of HN genes had the character of geographical areas. The sequences of HN gene in Chinese isolates had an identity of more than 97%. But there was only 79.2% - 80.7% in HN nucleotide homology among the Chinese isolates and La Sota (vaccine).