Genetic variation of Sherardia arvensis L. – How land use and fragmentation affect an arable weed

The distribution of arable weeds extends over regions, where the species occur naturally in different kinds of habitats and regions, where they are mainly limited to arable fields.Here, we present a comparative study on the genetic structure of the arable weed Sherardia arvensis L. comprising populations from Mediterranean grasslands in Southern France and populations from arable fields in Germany. Enhanced by intensified land use since the 1960th, overall population density in Germany is very low compared to the density of populations in Southern France. We tested whether genetic variation within and among populations differ between France and Germany due to different patterns of distribution and land use. Therefore, we analysed 231 individuals of S. arvensis from 24 populations using AFLPs. Based on fragment analysis data we compared spatial genetic structure and genetic variation of populations from the two regions.Genetic variation within populations from the two regions (Shannon Index = 0.13 for both) and genetic variation among populations (26.8% and 30.0% in an analysis of molecular variance) were comparable. In both regions a drift-migration model supported the assumption of gene flow between populations. However, a clear correlation of geographical and genetic distances could only be reported for the indigenous populations from France (r = 0.46; P = 0.02), whereas in Germany a spatial genetic relationship between populations was missing (r = 0.16; P = 0.21).Our study revealed that neither French nor German populations are genetically impoverished. For French populations further the spatial genetic structure suggests that there is current gene flow between populations through pollinators and seed dispersal by cattle. For German populations comparable levels of genetic diversity and gene flow were detected, but gene flow was random. This can be traced back in all likelihood to diffuse dispersal by agriculture and the mechanical reshuffling of the individuals from the soil seed bank.     

The Pitcairn Islands, South Pacific Ocean: plate tectonic and climatic contexts

The remote Pitcairn Group in the South Pacific Ocean comprises a volcanic island (Pitcairn Island), two low coral atolls (Oeno, Ducie) and a raised coralline island (Henderson Island). The geological history of these islands, on anomalously thin oceanic lithosphere, is related to the development of two subparallel island chains (Oeno-Henderson-Ducie; Pitcairn) associated with intra-Pacific plate 'hotspot' activity; the surface manifestation of this activity has been partly determined by structural lineations in the plate inherited from past plate history. The climate of the Pitcairn Islands is determined by the position of the subtropical high pressure system and the South Pacific Convergence Zone. Variations in the strength of this atmospheric circulation system, measured by changes in the Southern Oscillation index of pressure difference, provide a partial explanation of the long-term variability of mean annual rainfall at Pitcairn Island. Knowledge of past climates in the Pitcairn Group remains speculative. Maps of the Pitcairn Islands and a report of climate at Henderson Island (2/91-1/92) are included in the paper.     

Mysterious bio-duck sound attributed to the Antarctic minke whale (Balaenoptera bonaerensis)

For decades, the bio-duck sound has been recorded in the Southern Ocean, but the animal producing it has remained a mystery. Heard mainly during austral winter in the Southern Ocean, this ubiquitous sound has been recorded in Antarctic waters and contemporaneously off the Australian west coast. Here, we present conclusive evidence that the bio-duck sound is produced by Antarctic minke whales (Balaenoptera bonaerensis). We analysed data from multi-sensor acoustic recording tags that included intense bio-duck sounds as well as singular downsweeps that have previously been attributed to this species. This finding allows the interpretation of a wealth of long-term acoustic recordings for this previously acoustically concealed species, which will improve our understanding of the distribution, abundance and behaviour of Antarctic minke whales. This is critical information for a species that inhabits a difficult to access sea-ice environment that is changing rapidly in some regions and has been the subject of contentious lethal sampling efforts and ongoing international legal action.     

Frequency of the Insertion Sequence IS4Bsu1 among Bacillus subtilis Strains Isolated from Fermented Soybean Foods in Southeast Asia

Among 45 Bacillus subtilis strains isolated from non-salted types of fermented soybeans produced in several Southeast Asian countries, 20 had the insertion sequence IS4Bsu1 in the chromosome. In contrast, none of 49 B. subtilis strains of non-food origin contained IS4Bsu1. Frequent occurrence of this mobile DNA element in the soybean-fermenting B. subtilis would reflect the fact that few strains flourish on soybeans and thereby contribute to soybean fermentation.     

Genetic markers for identification of Patagonian toothfish and Antarctic toothfish

Fillet samples of the toothfish Dissostichus eleginoides and D. mawsoni can be distinguished readily by muscle proteins revealed by isoelectric focusing and mitochondrial DNA markers. The proteins also distinguish toothfish from other species marketed under similar trade names.     

Spatio‐temporal variation of salt marsh seedling establishment in relation to the abiotic and biotic environment

Contrary to our expectations, soil salinity and moisture explained little of the spatial variation in plant establishment in the upper intertidal marsh of three southern California wetlands, but did explain the timing of germination. Seedlings of 27 species were identified in 1996 and 1997. The seedlings were abundant (maximum densities of 2143/m² in 1996 and 1819/m² in 1997) and predominantly annual species. CCAs quantified the spatial variation in seedling density that could be explained by three groups of predictor variables: (1) perennial plant cover, elevation and soil texture (16% of variation), (2) wetland identity (14% of variation) and (3) surface soil salinity and moisture (2% of variation). Increasing the spatial scale of analysis changed the variables that best predicted patterns of species densities. Timing of germination depended on surface soil salinity and, to a lesser extent, soil moisture. Germination occurred after salinity had dropped below a threshold or, in some cases, after moisture had increased above a critical level. Between 32% and 92% of the seedlings were exotic and most of these occurred at lower soil salinity than native species. However, Parapholis incurva and Mesembryanthemum nodiflorum were found in the same environments as the native species. In 1997, the year of a strong El Niño/Southern Oscillation event with high rainfall and sea levels, the elevation distribution of species narrowed and densities of P. incurva and other exotic species decreased but densities of native and rare species did not change. The ‘regeneration niche’ of wetland plant communities includes the effects of multiple abiotic and biotic factors on both the spatial and temporal variations in plant establishment.     

Description of Careproctus guillemi n. sp. (Pisces: Scorpaeniformes) from Weddell Sea

Careproctus guillemi differs from the other Careproctus species in the following combination of characters: pectoral fin rays 22 (11 + 4+7); pectoral girdle with three round radials (1 + 0+ 1 + 1); mouth oblique and maxillary extending beyond posterior edge of eye. Relationships between C. guillemi and C. longipectoralis are provided. The endochondral pectoral girdle of C. longipectoralis is described for the first time.     

Copepod grazing during an iron-induced diatom bloom in the Antarctic Circumpolar Current (EisenEx): I. Feeding patterns and grazing impact on prey populations

Feeding activity, selective grazing and the potential grazing impact of two dominant grazers of the Polar Frontal Zone, Calanus simillimus and Rhincalanus gigas, and of copepods < 2 mm were investigated with incubation experiments in the course of an iron fertilized diatom bloom in November 2000. All grazers were already actively feeding in the low chlorophyll waters prior to the onset of the bloom. C. simillimus maintained constant clearance rates and fed predominantly on diatoms. R. gigas and the small copepods strongly increased clearance and ingestion of diatoms in response to their enhanced availability. All grazers preyed on microzooplankton, most steadily on ciliates, confirming the view that pure herbivory appears to be the exception rather than the rule in copepod feeding. The grazers exhibited differences in feeding behavior based on selectivity indices. C. simillimus and R. gigas showed prey switching from dinoflagellates to diatoms in response to the phytoplankton bloom. All grazers most efficiently grazed on large diatoms leading to differences in daily losses for large and small species, e.g. Corethron sp. or Thalassionema nitzschioides. Species-specific diatom mortality rates due to grazing suggest that the high feeding activity of C. simillimus prior to and during the bloom played a role in shaping diatom population dynamics.     

Unrecognized diversity of a scale worm,Polyeunoa laevis (Annelida: Polynoidae), that feeds on soft coral

A goal of taxonomy is to employ a method of classification based on phylogeny that captures the morphological and genetic diversity of organismal lineages. However, morphological and genetic diversity may not always be concordant, leading to challenges in systematics. The scale worm Polyeunoa laevis has been hypothesized to represent a species complex based on morphology, although there is little knowledge of its genetic diversity. Commonly found in Antarctic waters and usually associated with gorgonian corals (especially Thouarella), this taxon is also reported from the south-west Atlantic, Magellanic and sub-Antarctic regions. We employ an integrative taxonomic approach to examine the traditional morphological characters used for scale worm identification in combination with COI mitochondrial gene data and whole mtDNA genomes. Moreover, we consider P. laevis's association with Thouarella by examining data from the mMutS gene, a soft-coral phylogenetic marker. Analyses for P. laevis recovered 3 clades, two in Antarctic waters and one from the Argentina-Indian Ocean. Interestingly, genetic and morphological results show differences between specimens from South Argentina and the Antarctic region, suggesting that open ocean barriers might have limited gene flow from these regions. Bayesian phylogenetic analyses for Thouarella resulted in at least 12 lineages, although some of the lineages consist of only a single individual. Our results show different evolutionary histories for both species, confirming that association between these scale worms and their hosts is not restrictive. For both taxonomic groups, biodiversity in the Southern Ocean appears to be underestimated.