大熊猫bHLH基因家族的识别与分析

碱性/螺旋-环-螺旋(basic/Helix-Loop-Helix,bHLH)蛋白质家族是数量最多、最复杂的转录因子家族之一,几乎存在于所有真核生物体内,其功能包括参与神经发育、肌肉形成、造血等重要生物学过程的基因表达调控.目前对一些动物的bHLH蛋白的研究已较为广泛和深入,但作为保护动物的旗舰物种大熊猫的bHLH蛋白的研究却很有限,大熊猫全基因组最近已经公布,这方便了大熊猫bHLH的深入研究.本研究发现大熊猫基因组中共有118个bHLH基因,根据结构域差异和系统发育分析结果,大熊猫的bHLH基因归属于42个亚家族,其中属于A、B、C、D、E、F 6个组的数目分别为:56、26、17、5、6、0,此外还有8个大熊猫的bHLH成员暂时无法将其分为任何一组,列为"orphans"组.有些种类,如COE和MITF亚家族在大熊猫进化过程中可能出现了丢失.     

条件性基因敲除:骨髓细胞特异性敲除Ncol2基因小鼠的建立和基因型鉴定

Ncol2是新发现的参与免疫调节的重要因子,Ncol2基因骨髓细胞特异性敲除小鼠的建立,能够有针对性的研究Ncol2基因缺失后对免疫系统的影响。根据条件性基因敲除的原理,本文利用loxp转基因小鼠和在骨髓细胞特异性表达Cre重组酶的LysMcre小鼠,繁殖建立了骨髓细胞特异性敲除Ncol2基因的小鼠,并提供了用鼠尾做基因型鉴定的简便方法。     

林跳鼠亚科的系统学研究述评

林跳鼠亚科分布在亚洲和北美洲,虽然种类及数量都不多,但对该亚科的分类和系统发育关系一直存在争议,近几年对林跳鼠哑科分子系统学的研究,产生了一些与形态学、生物地理学等研究不同的结果.本文对林跳鼠亚科系统学研究的一些工作加以述评,归纳出林跳鼠亚科在系统学方面还存在的问题,并对林跳鼠亚科系统学的进一步研究提出了一些建议.     

Intratumor heterogeneity of biomarker expression in breast carcinomas

Small biopsy samples are used increasingly to assess the biomarker expression for prognostic information and for monitoring therapeutic responses prior to and during neoadjuvant therapy. The issue of intratumor heterogeneity of expression of biomarkers, however, has raised questions about the validity of the assessment of biomarker expression based on limited tissue samples. We examined immunohistochemically the expression of HER-2neu (p185^erbB-2), epidermal growth factor receptor (EGFR), Bcl-2, p53, and proliferating cell nuclear antigen (PCNA) in 30 breast carcinomas using archived, paraffin embedded tissue and determined the extent of intratumor heterogeneity. Each section was divided into four randomly oriented discrete regions, each containing a portion of the infiltrating carcinoma. For each tumor, the entire lesion and four regions were analyzed for the expression of these markers. Scores of both membrane and cytoplasmic staining of HER-2neu and EGFR, scores of cytoplasmic staining of Bcl-2, and scores of nuclear staining of both p53 and PCNA were recorded. The intensity of staining and the proportion of immunostained cells were determined. A semiquantitative immunoscore was calculated by determining the sum of the products of the intensity and corresponding proportion of stained tumor cells. We analyzed both invasive (IDC) and in situ (DCIS) carcinomas. The Wilcoxon signed-rank test was used for paired comparisons between overall and regional immunoscores and between overall and regional percentages of stained cells. Spearman's correlation coefficients were used to assess the level of agreement of overall biomarker expression with each of the regions. Generalized linear models were used to assess overall and pair-wise differences in the absolute values of percent changes between overall and regional expression of biomarkers. For IDCs, there were no statistically significant differences in the expression of the biomarkers in terms of either the percentage of cells staining or the immunoscores when comparing the entire tumor with each region except for the lower EGFR expression of arbitrarily selected region 1 and lower p53 expression of region 1 compared to that of the entire tumor section. For DCIS, there were no statistically significant differences in the expression of the biomarkers between the entire tumor and each region except in PCNA of region 2 compared to that of entire tumor section. Positive correlation of immunoscores was observed between the entire tumor and each region as well as across all four regions for IDC. Similar observations were noted with DCIS except for HER-2neu and PCNA. No statistically significant differences were observed in the absolute values of percent changes of biomarker expression between overall and the four regions for both DCIS and IDC. Therefore, no significant intratumor heterogeneity in the expression of HER-2neu, Bcl-2, and PCNA was observed in IDC. Minor regional variations were observed for EGFR and p53 in IDC. Similarly, no significant regional variation in the expression of markers was observed in DCIS except for PCNA.     

四川嘛咪泽自然保护区不同生境类型鸟类多样性调查

2006年4~5月采用样点法对四川嘛咪泽自然保护区的鸟类组成和种群数量进行了调查,共记录到鸟类7目23科105种,数量1948只,其中国家重点保护鸟类6种,我国特有鸟类7种。鸟类区系以东洋界成分为主。对不同生境鸟类多样性的分析结果表明:1)人工林和灌丛草地生境间的鸟类群落相似性指数最高,灌丛草地和原始林之间鸟类群落相似性最低;2)次生林鸟类多样性指数最高,灌丛草地最低;3)原始林内国家级保护鸟类最多,特有种仅次于次生林;4)林中鸟类垂直分布中间层密度最大。     

孔雀活化素基因(activin)ßA 亚基成熟肽序列的分子克隆及其对白孔雀起源与分类的佐证分析

参考已经克隆的活化素(activin)基因βA亚基成熟肽序列,设计一对兼并引物,从绿孔雀(pavo muticus)、蓝孔雀(pavo cristatus)和白孔雀基因组中克隆到活化素基因βA亚基成熟肽序列。测序结果表明,活化素基因βA亚基成熟肽序列长345bp,编码115个氨基酸。序列分析表明,蓝孔雀与绿孔雀核苷酸同源性为98.0%,而蓝孔雀与白孔雀核苷酸同源性为98.8%。NCBI收索结果显示,活化素基因βA亚基成熟肽序列在不同物种间都非常保守。氨基酸功能位点分析表明,活化素βA亚基成熟肽可能在细胞信号传递过程中发挥了很重要的作用。另外,利用活化素基因βA亚基成熟肽序列构建了三种孔雀的限制性酶切图谱及系统发生树。结果显示,白孔雀与蓝孔雀的亲源关系比与绿孔雀的亲源关系近。我们认为,白孔雀来源于蓝孔雀,很可能是蓝孔雀一个杂交后代或亚种,而不是人们通常所认为的仅仅是蓝孔雀的一个颜色突变体。Abstract: The sequences of activin geneβA subunit mature peptide have been amplified from white peafowl, blue peafowl (pavo cristatus) and green peafowl (pavo muticus) genomic DNA by polymerase chain reaction (PCR) with a pair of degenerate primers. The target fragments were cloned into the vector pMD18-T and sequenced. The length of activin gene βA subunit mature peptide is 345bp, which encoded a peptide of 115 amino acid residues. Sequence analysis of activin gene βA subunit mature peptide demonstrated that the identity of nucleotide is 98.0% between blue peaflowl and green peafowl, and the identity of that is 98.8% between blue peaflowl and white peafow. Sequences comparison in NCBI revealed that the sequences of activin geneβA subunit mature peptides of different species are highly conserved during evolution process. In addition, the restriction enzyme map of activins is high similar between white peafowl and blue peafowl. Phylogenetic tree was constructed with Mega 2 and Clustalxldx software. The result showed that white peafowl has a closer relationship to blue peafowl than to green peafowl. Considered the nucleotide differences of peafowls’ activin geneβA subunit mature peptides, a highly conserved region, we supported that white peafowl was derived from blue peafowl, and it is more possible the hybrid but just the product of color mutation, or maybe as a subspecies of Pavo genus.     

用荧光物质浸泡标记胭脂鱼仔、稚鱼耳石

用茜素络合物和盐酸四环素溶液分别对胭脂鱼（Myxocyprinus asiaticus）仔、稚鱼浸泡标记,结果表明,100～200mg／L的茜素络合物溶液浸泡24h对胭脂鱼仔、稚鱼耳石有很好的标记效果。相同浸泡浓度下,随着日龄的增长,耳石上的荧光反应强度降低。三对耳石中,微耳石和矢耳石对茜素络合物较敏感,星耳石敏感性则较低。盐酸四环素溶液对仔、稚鱼耳石的标记效果很差,浸泡液浓度为100mg／L和120mg/L时,仅能在微耳石上检测到较弱的荧光标记,而150mg／L及以上浓度的浸泡液对稚鱼有较高的致死作用。因此,茜素络合物是对胭脂鱼早期鱼苗进行化学标记比较合适的荧光物质,而盐酸四环素不适于标记该鱼的耳石。在对标记鱼进行荧光检测时,矢耳石和微耳石是适合的材料。     

5种抗生素对4株化脓隐秘杆菌的最小杀菌浓度测定

目的测定诺氟沙星、恩诺沙星、环丙沙星、安普霉素和庆大霉素5种抗生素对林麝化脓隐秘杆菌的最小杀菌浓度,为选择治疗林麝脓肿病的有效药物提供指导。方法将菌液与不同浓度的抗生素混合作用30min,再加入中和剂作用10min,吸取300mL作用液均匀涂布在胎牛血清培养基上,38℃培养48h,观察并记录。结果 5种抗生素对化脓隐秘杆菌的最小杀菌浓度不一致,对4株菌杀菌效果相对较好的药物为环丙沙星(CIP),但对TP1需要较高浓度(128μg/mL)。结论喹诺酮类抗生素虽然抑菌效果较明显,但要完全杀死化脓隐秘杆菌却需要较高浓度,这很可能与化脓隐秘杆菌菌膜的存在有关。到目前为止,治疗林麝脓肿病的首选药物为喹诺酮类抗生素,尤以环丙沙星效果最佳。     

常用大鼠发热模型研究

目的探讨干酵母、2,4-二硝基酚、脂多糖（LPS）、细菌内毒素引起SD大鼠实验性发热的过程和特点,比较不同浓度外致热原对大鼠发热过程的影响。方法建立大鼠干酵母（2 g/kg、1 g/kg）、2,4-二硝基酚（30mg/kg、15 mg/kg）、LPS（100μg/kg、20μg/kg）、细菌内毒素（120 EU/kg、60 EU/kg）发热模型,记录不同时间点大鼠升温值,绘制各模型平均升温曲线,比较不同大鼠发热模型的发热特点。结果皮下注射干酵母混悬液,注射后2～3 h开始升温,6～7 h达峰值,升温持续20 h;皮下注射2,4-二硝基酚溶液,注射后20 min开始升温,1～1.5 h达峰值,升温持续3～5 h;腹腔注射LPS、细菌内毒素,注射后30 min开始升温,此后升温曲线表现为双相热或三相热,升温持续5～8 h。结论不同外致热原所致SD大鼠发热的过程和特点不同;外致热原浓度不同,所致大鼠发热过程和特点不同。解热试验中,应根据受试药物本身特点选用合适的大鼠发热模型。