The role of organic matter and microbial community controlling nitrate reduction under elevated ferrous iron concentrations in boreal lake sediments

Hydrobiologia - The nitrogen availability, that affects the greenhouse gas emission and the trophic level of lakes, is controlled mainly by microbial processes. We measured in a boreal nitrate and...     

Quantifying Beetle-Mediated Effects on Gas Fluxes from Dung Pats

Agriculture is one of the largest contributors of the anthropogenic greenhouse gases (GHGs) responsible for global warming. Measurements of gas fluxes from dung pats suggest that dung is a source of GHGs, but whether these emissions are modified by arthropods has not been studied. A closed chamber system was used to measure the fluxes of carbon dioxide (CO₂), methane (CH₄) and nitrous oxide (N₂O) from dung pats with and without dung beetles on a grass sward. The presence of dung beetles significantly affected the fluxes of GHGs from dung pats. Most importantly, fresh dung pats emitted higher amounts of CO₂ and lower amounts of CH₄ per day in the presence than absence of beetles. Emissions of N₂O showed a distinct peak three weeks after the start of the experiment – a pattern detected only in the presence of beetles. When summed over the main grazing season (June–July), total emissions of CH₄ proved significantly lower, and total emissions of N₂O significantly higher in the presence than absence of beetles. While clearly conditional on the experimental conditions, the patterns observed here reveal a potential impact of dung beetles on gas fluxes realized at a small spatial scale, and thereby suggest that arthropods may have an overall effect on gas fluxes from agriculture. Dissecting the exact mechanisms behind these effects, mapping out the range of conditions under which they occur, and quantifying effect sizes under variable environmental conditions emerge as key priorities for further research.     

Biochar application to a fertile sandy clay loam in boreal conditions: effects on soil properties and yield formation of wheat, turnip rape and faba bean

Background and aims

We studied the effect of different biochar (BC) application rates on soil properties, crop growth dynamics and yield on a fertile sandy clay loam in boreal conditions.

Methods

In a three-year field experiment conducted in Finland, the field was divided into three sub-experiments with a split-plot experimental design, one for each crop: wheat (Triticum aestivum), turnip rape (Brassica rapa), and faba bean (Vicia faba). The main plot factor was BC rate (0, 5 and 10 t DM ha^?1) and the sub-plot factor was the N-P-K fertiliser rate. Soil physico-chemical properties as well as plant development, yield components and quality were investigated.

Results

BC addition did not significantly affect the soil chemical composition other than the increased C and initially increased K contents. Increased soil moisture content was associated with BC application, especially at the end of the growing seasons. BC decreased the N content of turnip rape and wheat biomass in 2010, thus possibly indicating an initial N immobilisation. In dry years, the seed number per plant was significantly higher in faba bean and turnip rape when grown with BC, possibly due to compensation for decreased plant density and relieved water deficit. However, the grain yields and N uptake with BC addition were not significantly different from the control in any year.

Conclusions

Even though BC application to a fertile sandy clay loam in a boreal climate might have relieved transient water deficit and thereby supported yield formation of crops, it did not improve the yield or N uptake.     

A comparison of unheated loose housing with stables on the respiratory health of weaned-foals in cold winter conditions: an observational field-study

Background

Newly weaned horses in Finland are often moved to unheated loose housing systems in which the weanlings have free access to a paddock and a shelter. This practice is considered to be good for the development of young horses. The daily temperatures can stay below ? 20 °C in Finland for several consecutive weeks during the winter season. However, the effect of unheated housing in a cold climatic environment on the respiratory health of weanlings under field conditions has not been studied before. This investigation was an observational field-study comprising 60 weanlings among 11 different voluntary participant rearing farms in Finland. Weanlings were either kept in unheated loose housing systems (n = 36) or in stables (n = 24) and were clinically examined on two separate occasions 58 days apart in cold winter conditions.

Results

The odds of clinical respiratory disease were lower in the older foals (log_e days); OR = 0.009, P = 0.044). The plasma fibrinogen concentration was higher when the available space (m²/weanling) in the sleeping hall was smaller (P = 0.014) and it was lower when the sleeping hall was not insulated (P = 0.010). The plasma fibrinogen concentrations at the second examination were lower with a body condition score above 3 (P = 0.070). Standardbreds kept in loose housing systems had a lower body condition score than Finnhorses or Standardbreds kept in stables at both examinations (P = 0.026 and P = 0.007, respectively). Haemoglobin level was lower in weanlings in loose housing systems compared to their counterparts at the first examination (P = 0.037). Finnhorses had higher white blood cell count than Standardbreds at first (P = 0.002) and at the second examination (P = 0.001).

Conclusions

Keeping weanling horses in cold loose housing systems does not seem to increase the occurrence of respiratory disease, but special attention should be focused on ventilation, air quality and feeding-practices. Our field study data suggest it might be advantageous to keep Standardbred foals born late in the season in a stable over the Finnish winter.

     

Comparative proteome profiling of bovine and human Staphylococcus epidermidis strains for screening specifically expressed virulence and adaptation proteins

The present study reports a comparative proteome cataloging of a bovine mastitis and a human‐associated Staphylococcus epidermidis strain with a specific focus on surfome (cell‐wall bound and extracellular) proteins. Protein identification by 1DE coupled with LC‐MS/MS analyses resulted in 1400 and 1287 proteins from the bovine (PM221) and human (ATCC12228) strains, respectively, covering over 50% of all predicted and more than 30% of all predicted surfome proteins in both strains. Comparison of the identification results suggests elevated levels of proteins involved in adherence, biofilm formation, signal transduction, house‐keeping functions, and immune evasion in PM221, whereas ATCC12228 was more effective in expressing host defense evasion proteases, skin adaptation lipases, hemagglutination, and heavy‐metal resistance proteins. Phenotypic analyses showed that only PM221 displays protein‐ and DNA‐mediated adherent growth, and that PM221 was more efficient in cleaving tributyrin, a natural compound of milk fat under low CO₂ conditions. These findings are in line with the identification data and suggest that distinct expression of lipases and adhesive surfome proteins could lead to the observed phenotypes. This study is the first extensive survey of S. epidermidis proteomes to date, providing several protein candidates to be examined for their roles in adaptation and virulence in vivo. All MS data have been deposited in the ProteomeXchange with identifier PXD000404 ( http://proteomecentral.proteomexchange.org/dataset/PXD000404 ).     

The effects of a permanently elevated water table in an acid sulphate soil on reed canary grass for combustion

Aims and background

Acid sulphate (AS) soils require careful management to prevent the environmental hazards that result from the oxidation of sulphide-bearing deep soil layers and the consequent acidification of soil and waters. Management with a high water table precludes many food crops, so their suitability for perennial energy cropping was investigated in a 3-year study using reed canary grass (Phalaris arundinacea L., RCG).

Methods

Monolithic lysimeters made of undisturbed AS soil and equipped with ground-water level control and measurement instruments were planted with 1- year-old RCG turfs taken from a non-AS field. Two water tables were imposed, high (HWT, 20 cm below soil surface) and low (LWT, 70 cm below soil surface, considered normal for agriculturally managed AS soils) for a 3 year period. Growth and physiological characters of RCG were determined and its ash content and the elemental composition of its dry biomass (Ca, Cl, K, Mg, and S) were analysed.

Results

The level of the water table had significant effects on crop growth and quality. Shoots were 25 to 29 % taller, consequently yielding more dry matter in HWT than in LWT lysimeters. Concentrations of K, Mg and S that can affect the combustion process were higher in biomass harvested from LWT lysimeters than from the HWT plants. At the end of the experiment, the spatial distribution of roots within the soil profile differed between treatments. Roots penetrated to the bottom of LWT lysimeters with total root dry mass nearly twice that in HWT.

Conclusions

RCG intended for burning grows and performs well in acid sulphate soils managed with a raised water table. This management option minimizes the risk of acid flows from oxidized soils, and allows farmers to harvest a non-food crop from soils that would have to be drained to provide a food or feed crop.