Isolation and characterization of the plasma membrane from the yeast Pichia pastoris

Despite similarities of cellular membranes in all eukaryotes, every compartment displays characteristic and often unique features which are important for the functions of the specific organelles. In the present study, we biochemically characterized the plasma membrane of the methylotrophic yeast Pichia pastoris with emphasis on the lipids which form the matrix of this compartment. Prerequisite for this effort was the design of a standardized and reliable isolation protocol of the plasma membrane at high purity. Analysis of isolated plasma membrane samples from P. pastoris revealed an increase of phosphatidylserine and a decrease of phosphatidylcholine compared to bulk membranes. The amount of saturated fatty acids in the plasma membrane was higher than in total cell extracts. Ergosterol, the final product of the yeast sterol biosynthetic pathway, was found to be enriched in plasma membrane fractions, although markedly lower than in Saccharomyces cerevisiae. A further characteristic feature of the plasma membrane from P. pastoris was the enrichment of inositol phosphorylceramides over neutral sphingolipids, which accumulated in internal membranes. The detailed analysis of the P. pastoris plasma membrane is discussed in the light of cell biological features of this microorganism especially as a microbial cell factory for heterologous protein production.     

Characterization of the endoevaporitic microbial communities in a hypersaline gypsum crust by fatty acid analysis

We have used fatty acid analyses to study the community structure of a layered endoevaporitic microbial community within a gypsum crust that covers the bottom of a saltern evaporation pond in Eilat, Israel. This community, living at a salinity of 218–238 g l⁻¹ total dissolved salts, consists of an upper brown layer dominated by unicellular cyanobacteria, a green layer with filamentous cyanobacteria, a red-purple layer with both Chromatium and Ectothiorhodospira/Halorhodospira type of purple sulfur bacteria, and a black layer in which dissimilatory sulfate reduction occurs. An olive-green layer is sometimes present below the red-purple layer. Analysis by gas chromatography/mass spectrometry of the fatty acid methyl esters prepared from the different fractions showed characteristic patterns in each layer, and these could be related to fatty acid composition data from the literature and to fatty acid analyses of representative halophilic microorganisms isolated from the site. The nature of the fatty acids in the green layer suggests that the cyanobacteria present there use the oxygen-independent pathway for production of unsaturated fatty acids, a pathway only occasionally encountered in filamentous cyanobacteria. The facultative anaerobic nature of the cyanobacteria in the green layer was confirmed by their ability to perform anoxygenic photosynthesis with sulfide as electron donor. Specific signature fatty acids identified for each layer corresponded well with the microscopic and functional analysis of the biota present. Guest Editor: John M. Melack Saline Waters and their Biota     

Spatial and temporal pattern of light-regulated gene expression during tobacco seedling development: the photosystem II-related genes Lhcb (Cab) and PsbP (Oee2)

The white mustard ( Sinapis alba L.) Lhcb1*1 and PsbP*1 genes that code for proteins related to photosystem II (PSII) in chloroplasts were examined by analysis of promoter fragment β-glucuronidase (GUS) reporter constructs in transgenic tobacco ( Nicotiana tabacum L.) seedlings. The endogenous tobacco genes and the introduced mustard genes follow the same kinetics during seedling development and they show the same expression characteristics for light regulation and for the influence of a 'plastidic signal'. Hence, the cellular environment of the host plant always dominates the regulation of Lhcb1*1 and PsbP*1 gene expression; as with the mustard system clear differences in the temporal pattern and the physiological responses could be seen. The spatio-temporal pattern of gene expression was analysed in the different organs of the transgenic tobacco seedlings. In the cotyledons, expression at the PsbP*1 promoter starts in advance, and both genes show a rather uniform distribution of expression during seedling development. In the hypocotyl, a sequential basipetal pattern could be detected and a coordinated expression for the two promoters was analysed. The hypocotyl base is only included in this expression pattern if the seedlings receive light at early stages of development, whereas in later stages gene expression is repressed. A model is proposed that divides tobacco seedling development into three main phases.     

Validated Postbiotic Screening Confirms Presence of Physiologically-Active Metabolites,Such as Short-Chain Fatty Acids,Amino Acids and Vitamins in Hylak® Forte

Probiotics and Antimicrobial Proteins - Hylak® forte is a postbiotic that inhibits the growth of pathogenic bacteria by reducing intestinal pH. It is assumed the potential presence of...     

Cross-Sectional Comparison of Small Animal [18F]-Florbetaben Amyloid-PET between Transgenic AD Mouse Models

We aimed to compare [¹⁸F]-florbetaben PET imaging in four transgenic mouse strains modelling Alzheimer’s disease (AD), with the main focus on APPswe/PS2 mice and C57Bl/6 mice serving as controls (WT). A consistent PET protocol (N = 82 PET scans) was used, with cortical standardized uptake value ratio (SUVR) relative to cerebellum as the endpoint. We correlated methoxy-X04 staining of β-amyloid with PET results, and undertook ex vivo autoradiography for further validation of a partial volume effect correction (PVEC) of PET data. The SUVR in APPswe/PS2 increased from 0.95±0.04 at five months (N = 5) and 1.04±0.03 (p<0.05) at eight months (N = 7) to 1.07±0.04 (p<0.005) at ten months (N = 6), 1.28±0.06 (p<0.001) at 16 months (N = 6) and 1.39±0.09 (p<0.001) at 19 months (N = 6). SUVR was 0.95±0.03 in WT mice of all ages (N = 22). In APPswe/PS1G384A mice, the SUVR was 0.93/0.98 at five months (N = 2) and 1.11 at 16 months (N = 1). In APPswe/PS1dE9 mice, the SUVR declined from 0.96/0.96 at 12 months (N = 2) to 0.91/0.92 at 24 months (N = 2), due to β-amyloid plaques in cerebellum. PVEC reduced the discrepancy between SUVR-PET and autoradiography from −22% to +2% and increased the differences between young and aged transgenic animals. SUVR and plaque load correlated highly between strains for uncorrected (R = 0.94, p<0.001) and PVE-corrected (R = 0.95, p<0.001) data. We find that APPswe/PS2 mice may be optimal for longitudinal amyloid-PET monitoring in planned interventions studies.     

A hybrid process for chiral separation of compound‐forming systems

The resolution of chiral compound‐forming systems using hybrid processes was discussed recently. The concept is of large relevance as these systems form the majority of chiral substances. In this study, a novel hybrid process is presented, which combines pertraction and subsequent preferential crystallization and is applicable for the resolution of such systems. A supported liquid membrane applied in a pertraction process provides enantiomeric enrichment. This membrane contains a solution of a chiral compound acting as a selective carrier for one of the enantiomers. Screening of a large number of liquid membranes and potential carriers using the conductor‐like screening model for realistic solvation method led to the identification of several promising carriers, which were tested experimentally in several pertraction runs aiming to yield enriched (+)‐(S)‐mandelic acid (MA) solutions from racemic feed solutions. The most promising system consisted of tetrahydronaphthalene as liquid membrane and hydroquinine‐4‐methyl‐2‐quinolylether (HMQ) as chiral carrier achieving enantiomeric excesses of 15% in average. The successful production of (+)‐(S)‐MA with a purity above 96% from enriched solutions by subsequent preferential crystallization proved the applicability of the hybrid process. Chirality, 2011. © 2010 Wiley‐Liss, Inc.     

Lettuce for Human Consumption Collected in Costa Rica Contains Complex Communities of Culturable Oxytetracycline- and Gentamicin-Resistant Bacteria

The present widespread use of antimicrobials in crop farming is based upon their successful application in human medicine. However, recent evidence suggests that the massive anthropogenic release of antimicrobials into the biosphere has selected for resistant bacteria and facilitated the transfer of resistance genes among them. This work deals with the examination of iceberg lettuce collected at 10 farms from two regions in Costa Rica. Farmers from nine sampling sites regularly apply commercial formulations containing gentamicin, oxytetracycline, streptomycin, or a combination of them without being able to indicate how often and how much of these products have been sprayed onto the crops. One organic farm was also investigated for comparative purposes. Oxytetracycline- and gentamicin-resistant bacteria were abundantly detected using selective enrichment cultures. Furthermore, colony mixtures from selective plates were characterized by chemotaxonomical and molecular fingerprinting methods. Both types of resistant communities accounted for a significant fraction of all culturable bacteria and included several resistance genes as well as factors for their potential horizontal transfer. Given the fact that lettuce is eaten raw, it may contribute to the dissemination of antimicrobial-resistant bacteria and/or their resistance genes from the environment to the microbial biota of the human intestine.     

Lipidome and proteome of lipid droplets from the methylotrophic yeast Pichia pastoris

Lipid droplets (LD) are the main depot of non-polar lipids in all eukaryotic cells. In the present study we describe isolation and characterization of LD from the industrial yeast Pichia pastoris. We designed and adapted an isolation procedure which allowed us to obtain this subcellular fraction at high purity as judged by quality control using appropriate marker proteins. Components of P. pastoris LD were characterized by conventional biochemical methods of lipid and protein analysis, but also by a lipidome and proteome approach. Our results show several distinct features of LD from P. pastoris especially in comparison to Saccharomyces cerevisiae. P. pastoris LD are characterized by their high preponderance of triacylglycerols over steryl esters in the core of the organelle, the high degree of fatty acid (poly)unsaturation and the high amount of ergosterol precursors. The high phosphatidylinositol to phosphatidylserine of ~ 7.5 ratio on the surface membrane of LD is noteworthy. Proteome analysis revealed equipment of the organelle with a small but typical set of proteins which includes enzymes of sterol biosynthesis, fatty acid activation, phosphatidic acid synthesis and non-polar lipid hydrolysis. These results are the basis for a better understanding of P. pastoris lipid metabolism and lipid storage and may be helpful for manipulating cell biological and/or biotechnological processes in this yeast.     

Das Verhalten von Ameisenarbeiterinnen gegenüber der Königin nach vorangegangener weisellosigkeit

Zusammenfassung Arbeiterinnen vonMyrmica ruginodis Nyl. werden im weisellosen Zustand fertil. Sie legen aber keine Eier, wenn sie mehr als 3 Larven je Arbeiterin zu versorgen haben (Mamsch, 1965). Arbeiterinnengruppen wurden mit und ohne Larven von der Königin abgetrennt. In den eierlegenden Gruppen wurde die erneut zugesetzte eigene Königin entweder nicht beachtet oder angegriffen. In den Gruppen, in denen die Arbeiterinnen durch Larvenpflege unfruchtbar blieben, wurde die Königin intensiv beleckt und in das engere Nest eingetragen. Isolierte eierlegende Arbeitergruppen zeigten im Gegensatz zu Arbeiterinnen mit inaktiven Ovarien keine Tendenz, sich mit der Königingruppe zu vereinigen. Das veränderte Verhalten der Arbeiterinnen gegenüber der Königin ist demnach nicht vom Zeitraum der Weisellosigkeit abhängig. Es wurde nur bei eierlegenden Arbeiterinnen beobachtet.

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Summary Workers ofMyrmica ruginodis Nyl. start laying eggs after being separated from their queen. No deposition of eggs occurs in groups in which each worker has to feed 3 or more larvae (Mamsch, 1965). Worker groups rearing larvae and those without brood were separated from the queen.When the queen was put again into an egg-laying worker group, either no attention was paid to her or she was attacked. In groups of workers sterile due to rearing larvae the queen was licked intensively and carried into the nest cavity. Fertile worker groups showed no tendency to join the queen group. The change in the workers' behaviour does not depend on the time of the separation from the queen. It only occurs in groups of fertile workers.

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Résumé Des ouvrières deMyrmica ruginodis Nyl. deviennent fertiles après avoir été séparées de la reine. Mais elles ne pondent pas d'ufs, si elles ont chacune trois larves ou plus à nourrir (Mamsch, 1965). Des groupes d'ouvrières, d'une part avec larves et d'autre part sans, ont été séparés de la reine. Les groupes d'ouvrières pondeuses n'attachaient pas d'attention à la reine replacée dans le nid ou encore l'attaquaient. Dans les groupes où les ouvrières étaient restées infertiles à cause du nourrissement du couvain, la reine était léchée d'une façon intensive et portée à l'intérieur du nid. A l'opposé des ouvrières stériles, les groupes d'ouvrières pondeuses isolées ne montraient aucune tendance à joindre le groupe de la reine. Le changement du comportement des ouvrières ne dépend donc pas de la durée de l'état orphelin; il n'est observé que chez les ouvrières pondeuses.

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Herrn Prof. Dr.K. Gösswald, zum 60. Geburtstag gewidmet.