A new nuclear protease with cathepsin L properties is present in HeLa and Caco‐2 cells

Recently many authors have reported that cathepsin L can be found in the nucleus of mammalian cells with important functions in cell‐cycle progression. In previous research, we have demonstrated that a cysteine protease (SpH‐protease) participates in male chromatin remodeling and in cell‐cycle progression in sea urchins embryos. The gene that encodes this protease was cloned. It presents a high identity sequence with cathepsin L family. The active form associated to chromatin has a molecular weight of 60 kDa, which is higher than the active form of cathepsin L described until now, which range between 25 and 35 kDa. Another difference is that the zymogen present in sea urchin has a molecular weight of 75 and 90 kDa whereas for human procathepsin L has a molecular weight of 38–42 kDa. Based on these results and using a polyclonal antibody available in our laboratory that recognizes the active form of the 60 kDa nuclear cysteine protease of sea urchin, ortholog to human cathepsin L, we investigated the presence of this enzyme in HeLa and Caco‐2 cells. We have identified a new nuclear protease, type cathepsin L, with a molecular size of 60 kDa, whose cathepsin activity increases after a partial purification by FPLC and degrade in vitro histone H1. This protease associates to the mitotic spindle during mitosis, remains in the nuclei in binuclear cells and also translocates to the cytoplasm in non‐proliferative cells. J. Cell. Biochem. 111: 1099–1106, 2010. © 2010 Wiley‐Liss, Inc.     

Long‐term effect of biochar on the stabilization of recent carbon: soils with historical inputs of charcoal

This study was set up to identify the long‐term effect of biochar on soil C sequestration of recent carbon inputs. Arable fields (n = 5) were found in Belgium with charcoal‐enriched black spots (>50 m²; n = 14) dating >150 years ago from historical charcoal production mound kilns. Topsoils from these ‘black spots’ had a higher organic C concentration [3.6 ± 0.9% organic carbon (OC)] than adjacent soils outside these black spots (2.1 ± 0.2% OC). The soils had been cropped with maize for at least 12 years which provided a continuous input of C with a C isotope signature (δ¹³C) ?13.1, distinct from the δ¹³C of soil organic carbon (?27.4 ‰) and charcoal (?25.7 ‰) collected in the surrounding area. The isotope signatures in the soil revealed that maize‐derived C concentration was significantly higher in charcoal‐amended samples (‘black spots’) than in adjacent unamended ones (0.44% vs. 0.31%; P = 0.02). Topsoils were subsequently collected as a gradient across two ‘black spots’ along with corresponding adjacent soils outside these black spots and soil respiration, and physical soil fractionation was conducted. Total soil respiration (130 days) was unaffected by charcoal, but the maize‐derived C respiration per unit maize‐derived OC in soil significantly decreased about half (P < 0.02) with increasing charcoal‐derived C in soil. Maize‐derived C was proportionally present more in protected soil aggregates in the presence of charcoal. The lower specific mineralization and increased C sequestration of recent C with charcoal are attributed to a combination of physical protection, C saturation of microbial communities and, potentially, slightly higher annual primary production. Overall, this study provides evidence of the capacity of biochar to enhance C sequestration in soils through reduced C turnover on the long term.     

When ER stress reaches a dead end

Endoplasmic reticulum (ER) stress is a common feature of several physiological and pathological conditions affecting the function of the secretory pathway. To restore ER homeostasis, an orchestrated signaling pathway is engaged that is known as the unfolded protein response (UPR). The UPR has a primary function in stress adaptation and cell survival; however, under irreversible ER stress a switch to pro-apoptotic signaling events induces apoptosis of damaged cells. The mechanisms that initiate ER stress-dependent apoptosis are not fully understood. Several pathways have been described where we highlight the participation of the BCL-2 family of proteins and ER calcium release. In addition, recent findings also suggest that microRNAs and oxidative stress are relevant players on the transition from adaptive to cell death programs. Here we provide a global and integrated overview of the signaling networks that may determine the elimination of a cell under chronic ER stress. This article is part of a Special Section entitled: Cell Death Pathways. Guest Editors: Frank Madeo and Slaven Stekovic.     

Differences in baseline lung cancer mortality between the German uranium miners cohort and the population of the former German Democratic Republic (1960–2003)

A previous analysis of the radon-related lung cancer mortality risk, in the German uranium miners cohort, using Poisson modeling techniques, noted internal (spontaneous) rates that were higher on average than the external rates by 16.5% (95% CI: 9%; 24%). The main purpose of the present paper is to investigate the nature of, and possible reasons for, this difference by comparing patterns in spontaneous lung cancer mortality rates in a cohort of male miners involved in uranium extraction at the former Wismut mining company in East Germany with national male rates from the former German Democratic Republic. The analysis is based on miner data for 3,001 lung cancer deaths, 1.76 million person-years for the period 1960–2003, and national rates covering the same calendar-year range. Simple “age–period–cohort” graphical analyses were applied to assess the main qualitative differences between the national and cohort baseline lung cancer rates. Some differences were found to occur mainly at higher attained ages above 70 years. Although many occupational risk factors may have contributed to these observed age differences, only the effects of smoking have been assessed here by applying the Peto–Lopez indirect method for calculating smoking attributability. It is inferred that the observed age differences could be due to the greater prevalence of smoking and more mature smoking epidemic in the Wismut cohort compared to the general population of the former German Democratic Republic. In view of these observed differences between external population-based rates and internal (spontaneous) cohort baseline lung cancer rates, it is strongly recommended to apply only the internal rates in future analyses of uranium miner cohorts.     

Potassium exchange behaviour in Carribean volcanic ash soils under banana cultivation

Ca−K exchange isotherms of samples from carribean (Martinique island) volcanic soils differing in the weathering stage and in the nature of cation-exchange material were studied. Allophanic soils high in organic matter (Troporthents, Hydrandepts) exhibit a low selectivity for K-ions. Potassium is adsorbed specifically in the halloysitic soils (Humitropepts). A positive relationship exists between the affinity for K⁺ and the halloysite content. This relation is most likely due to the close association of 1∶1 hydrated phyllosilicates with 2∶1 smectitic clay minerals. A lower selectivity for K was observed in the kaolinitic soil materials (Dystropepts). Because parent rocks are very low in K, these exchange properties strongly influence their K status, through differences in susceptibility to K leaching losses and K availability to banana plants in intensive cropping systems.     

Model for the electrolytic environment and electrostatic properties of biomembranes

Physical and chemical interactions of ions with biomembranes are described by a model originating from the Stern theory. Equations of the model have analytical solutions only for very simple, often unrealistic situations. The numerical resolution adopted permits a much wider application of the model: Potentials and concentrations can be calculated anywhere from the surface and in any electrolytic environment. The model is applied to biomembranes. Simulations are presented in three-dimensional figures which allow one to use the model as a practical research tool. In particular, the simulations reveal that, in practice, it is possible to induce an increase of the surface charge density simultaneously with a decrease of the surface potential, and, theoretically, that the potential at the exclusion distance (which estimates the diffuse layer thickness) exhibits a remarkably constant value as the composition of the free solution is varied.     

Adsorption and exchange of Ca,Mg and K-ions on the root cell walls of clover and rye-grass

Summary The ion exchange properties of clover and rye-grass root cell walls were studied quantitatively. Three sets of experiments were performed: adsorption of Ca, Mg and K ions versus pH, adsorption versus cation concentration and exchange isotherms Ca–Mg and Mg–K. A model has been developed. It allows the satisfactory prediction of results (except for pH curves) with the adjustment of a minimum of parameters. The total charge (RT), on its own, accounts for the difference between the ion exchange properties of the clover and rye grass cell walls. The selectivities observed on root material are very different from those observed on soil exchange complexes. The decreasing affinities of cell walls for cations follow the sequence: Ca>MgK for cell walls. These differences of selectivity are much larger than those usually observed for soil exchange complexes.     

Release of nonexchangeable potassium from different size fractions of two highly K-fertilized soils in the rhizosphere of rape (Brassica napus cv Drakkar)

The release of nonexchangeable potassium by the different particle size fractions of two soils was studied with a culture device designed to confine soil samples in the rhizosphere of rape (Brassica napus cv Drakkar). After 8 days of cropping, the contribution of nonexchangeable K to K uptake ranged from 50% in the fine clay to 80–100% in the coarser fractions. Due to their high supplying power and their relative abundance, the silt fractions provided a major part of the supply of K by these soils.     

Effect of temperature on rice growth in nutrient solution and in acid sulphate soils from Vietnam

Climatic and soil factors are limiting rice growth in many countries. In Vietnam, a steep gradient of temperature is observed from the North to the South, and acid sulphate soils are frequently devoted to rice production. We have therefore attempted to understand how temperature affects rice growth in these problem soils, by comparison with rice grown in nutrient solution. Two varieties of rice, IR64 and X2, were cultivated in phytotrons at 19/21°C and 28/32°C (day/night) for 56 days, after 3 weeks preculture in optimal conditions. Two soils from the Mekong Delta were tested. Parallel with the growing experiments, these two soils were incubated in order to monitor redox potential (E _h ), pH, soluble Al and Fe, soluble, and available P. Tillering retardation at 20°C compared to 30°C was similar in nutrient solutions and in soils. The effect of temperature on increasing plant biomass was more marked in solutions than in soils. The P concentrations in roots and shoots were higher at 20°C than at 30°C, to such an extent that detrimental effect was suspected in plants grown in solution at the lowest temperature. The translocation of Fe from roots to shoots was stimulated upon rising temperature, both in solutions and in soils. This led to plant death on the most acid soil at 30°C. Indeed, the accumulation of Fe in plants grown on soils was enhanced by the release of Fe²⁺ due to reduction of Fe(III)-oxihydroxides. Severe reducing conditions were created at 30°C: redox potential (E _h ) dropped rapidly down to about 0 V. At 20°C, E _h did not drop below about 0.2 V, which is a value well in the range of Fe(III)/Fe(II) buffering. Parallel to E _h drop, pH increased up to about 6–6.5 at 30°C, which prevented plants from Al toxicity, even in the most acid soil. Phosphate behavior was obviously related to Fe-dynamics: more reducing conditions at 30°C have resulted in enhancement of available P, especially in the most acid soil.