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1.
Lucia Di Giambattista P. Grimaldi S. Gaudenzi D. Pozzi M. Grandi S. Morrone I. Silvestri A. Congiu Castellano 《European biophysics journal : EBJ》2010,39(6):929-934
We have made a preliminary analysis of the results about the effects on tumoral cell line (lymphoid T cell line Jurkat) induced
by UVB radiation (dose of 310 mJ/cm2) with and without a vegetable mixture. In the present study, we have used two techniques: Fourier transform infrared spectroscopy
(FTIR) and flow cytometry. FTIR spectroscopy has the potential to provide the identification of the vibrational modes of some
of the major compounds (lipid, proteins and nucleic acids) without being invasive in the biomaterials. The second technique
has allowed us to perform measurements of cytotoxicity and to assess the percentage of apoptosis. We already studied the induction
of apoptotic process in the same cell line by UVB radiation; in particular, we looked for correspondences and correlations
between FTIR spetroscopy and flow cytometry data finding three highly probable spectroscopic markers of apoptosis (Pozzi et
al. in Radiat Res 168:698–705, 2007). In the present work, the results have shown significant changes in the absorbance and
spectral pattern in the wavenumber protein and nucleic acids regions after the treatments. 相似文献
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QTL detection experiments in livestock species commonly use the half-sib design. Each male is mated to a number of females, each female producing a limited number of progeny. Analysis consists of attempting to detect associations between phenotype and genotype measured on the progeny. When family sizes are limiting experimenters may wish to incorporate as much information as possible into a single analysis. However, combining information across sires is problematic because of incomplete linkage disequilibrium between the markers and the QTL in the population. This study describes formulæ for obtaining MLEs via the expectation maximization (EM) algorithm for use in a multiple-trait, multiple-family analysis. A model specifying a QTL with only two alleles, and a common within sire error variance is assumed. Compared to single-family analyses, power can be improved up to fourfold with multi-family analyses. The accuracy and precision of QTL location estimates are also substantially improved. With small family sizes, the multi-family, multi-trait analyses reduce substantially, but not totally remove, biases in QTL effect estimates. In situations where multiple QTL alleles are segregating the multi-family analysis will average out the effects of the different QTL alleles. 相似文献
6.
The signal produced by fluorescence in situ hybridization (FISH) often is inconsistent among cells and sensitivity is low. Small DNA targets on the chromatin are difficult to detect. We report here an improved nick translation procedure for Texas red and Alexa Fluor 488 direct labeling of FISH probes. Brighter probes can be obtained by adding excess DNA polymerase I. Using such probes, a 30 kb yeast transgene, and the rp1, rp3 and zein multigene clusters were clearly detected. 相似文献
7.
Strategies for Savanna Restoration in the Southern Great Plains: Effects of Fire and Herbicides 总被引:2,自引:0,他引:2
Woody plant encroachment has degraded grassland and savanna ecosystems worldwide by decreasing herbaceous production and diversity, and altering these physiognomies toward woodlands. This study evaluated the long-term efficacy of fire and herbicide restoration strategies used in the southern Great Plains to reduce Honey mesquite ( Prosopis glandulosa ) dominance, restore a grassland/savanna physiognomy, and increase herbaceous production and diversity. Three treatments were evaluated: high-intensity winter fire, aerial spray of clopyralid + triclopyr (C + T), and aerial spray of clopyralid and were compared to untreated mesquite woodland (control). Post-treatment mesquite stand physiognomy was different between fire (low mortality, high basal sprouting), C + T (high mortality, high basal sprouting of surviving plants), and clopyralid (moderate mortality, low basal sprouting of surviving plants) treatments. From 6 to 8 years post-treatment, herbaceous production was increased in C + T and clopyralid treatments but not in the fire treatment. Mesquite regrowth in the fire treatment exerted a competitive influence that limited herbaceous production. Herbaceous functional group diversity was increased in fire and C + T treatments due to a decrease in C3 perennial grass dominance and an increase in C4 perennial grasses and/or C3 forbs. Treatments that maintained mesquite overstory (control and clopyralid) had lower herbaceous diversity due to C3 perennial grass dominance and lower C4 perennial grass cover. The clopyralid treatment demonstrated greatest potential for long-term restoration of southern Great Plains savanna by reducing mesquite canopy cover to historic levels, limiting mesquite basal regrowth and increasing grass production. 相似文献
8.
Qiaomei Fu Alissa Mittnik Philip L.F. Johnson Kirsten Bos Martina Lari Ruth Bollongino Chengkai Sun Liane Giemsch Ralf Schmitz Joachim Burger Anna Maria Ronchitelli Fabio Martini Renata G. Cremonesi Jiří Svoboda Peter Bauer David Caramelli Sergi Castellano David Reich Johannes Krause 《Current biology : CB》2013,23(7):553-559
9.
The molecular integrity of the active site of phytases from fungi is critical for maintaining phytase function as efficient catalytic
machines. In this study, the molecular dynamics (MD) of two monomers of phytase B from Aspergillus niger, the disulfide intact
monomer (NAP) and a monomer with broken disulfide bonds (RAP), were simulated to explore the conformational basis of the
loss of catalytic activity when disulfide bonds are broken. The simulations indicated that the overall secondary and tertiary
structures of the two monomers were nearly identical but differed in some crucial secondary–structural elements in the vicinity of
the disulfide bonds and catalytic site. Disulfide bonds stabilize the β-sheet that contains residue Arg66 of the active site and
destabilize the α-helix that contains the catalytic residue Asp319. This stabilization and destabilization lead to changes in the shape
of the active–site pocket. Functionally important hydrogen bonds and atomic fluctuations in the catalytic pocket change during the
RAP simulation. None of the disulfide bonds are in or near the catalytic pocket but are most likely essential for maintaining the
native conformation of the catalytic site.
Abbreviations
PhyB - 2.5 pH acid phophatese from Aspergillus niger, NAP - disulphide intact monomer of Phytase B, RAP - disulphide reduced monomer of Phytase B, Rg - radius of gyration, RMSD - root mean square deviation, MD - molecular dynamics. 相似文献10.
KB Cullberg T Christiansen SK Paulsen JM Bruun SB Pedersen B Richelsen 《Obesity (Silver Spring, Md.)》2013,21(3):454-460