Tolerance to acid soil conditions of the velvet beans Mucuna pruriens var. utilis and M. deeringiana

Velvet beans, fast growing leguminous cover crops used in the humid tropics, are shallow rooted on acid soils. This might be due to an inherent branching pattern, to an intrinsic toxicity of the acid subsoil or to a relative preference for root development in the topsoil. Such preference could be based on soil chemical factors in the subsoil or on physical factors such as penetration resistance or aeration. In a field experiment with two species of velvet bean (Mucuna pruriens var. utilis and M. deeringiana) all topsoil was removed and plants were sown directly into the acid subsoil. Root development was neither affected by this treatment nor by P fertilization or liming. In the absence of topsoil good root development in the exposed upper layer of subsoil was possible, so the hypothesis of a toxicity per se of the subsoil could be rejected. To test whether poor root development in the subsoil in the presence of topsoil is due to an inherent branching pattern of the plant or to a relative preference for topsoil, a modified in-growth core technique was used. Local topsoil and subsoil and an acid soil with a higher exchangeable Al content were placed in mesh bags at different depths and at different bulk densities, with and without lime and/or P fertilizer. A comparison of root development in mesh bags placed in the topsoil or subsoil showed that position and thus inherent branching pattern is not important. Root development in the subsoil was poor when this soil was placed in a mesh bag in the topsoil, but in an acid soil of much higher exchangeable Al content and higher percentage Al saturation more roots developed. In a second experiment in mesh bags, bulk density of the repacked soil in the range 1.0–1.5 g cm^-3 had no significant effect on root development. P fertilization and a high rate of liming of the soil placed in the mesh bag had a positive effect on root length density. It is concluded that poor root development in the acid subsoil under field conditions is due to a relative preference for topsoil. Al saturation and bulk density of the soil are not directly involved in this preference, but differences in availability of P and Mg or in Ca/Al ratios might play a role.     

Lifestyle Intervention Decreases Urine Trimethylamine N‐Oxide Levels in Prepubertal Children with Obesity

Objective

Early lifestyle interventions in children with obesity decrease risk of obesity and metabolic disorders during adulthood. This study aimed to identify metabolic signatures associated with lifestyle intervention in urine samples from prepubertal children with obesity.

Methods

Thirty‐four prepubertal children with obesity were studied before and after a 6‐month lifestyle intervention program, and anthropometric, metabolic, and nutritional variables were collected. A nuclear magnetic resonance approach was applied to obtain the metabolomic profile from urine samples. Partial least squares‐discriminant analysis (PLS‐DA) was used to achieve group classification and variable importance on projection (VIP) for biomarker selection.

Results

The intervention reduced caloric intake by 10% (P < 0.05) and BMI standard deviation score by 0.47 SD (P < 0.001). PLS‐DA identified trimethylamine N‐oxide (TMAO, VIP = 2.21) as the metabolite with the highest discrimination properties between groups. Urine TMAO levels were reduced after the intervention (P < 0.05). TMAO is a biomarker of cardiovascular disease risk and is a product of gut microbiota‐dependent metabolism of certain dietary compounds, including choline. Notably, changes in TMAO levels after the intervention did not correlate to differences in choline intake but were inversely associated with fiber intake (P < 0.05).

Conclusions

These results indicate that lifestyle intervention decreases TMAO levels in children with obesity.

     

Tolerance to acid soil conditions of the velvet beans Mucuna pruriens var. utilis and M. deeringiana

Fast growing, climbing leguminous cover crops such as the velvet beans can be used to reclaim weed-infested, degraded soils in the humid tropics, especially land covered by the grass Imperata cylindrica; they climb over the grass leaves and shade the grass out if their cover lasts long enough. Tolerance of two species of velvet bean to eroded soils was investigated by removing topsoil and directly sowing into the subsoil; plots where topsoil was not removed were used as a control. The response to small amounts of P fertilizer and lime was also tested. Removal of the topsoil resulted in retarded growth of both species, in increased dry matter content of the shoot, in decreased specific leaf area and in increased leaf weight ratio, due to shorter internodes. Six weeks after planting the leaf area index (LAI) was about 1.2 where topsoil was retained, sufficient for a shading effect on Imperata. Where topsoil had been removed, the LAI was only 0.6. Mucuna pruriens var. utilis showed a faster aboveground growth than M. deeringiana; the species did not differ in tolerance to eroded soil. Small amounts of P fertilizer had no significant effect on the growth of both Mucuna species. Shoot: root ratios, on a dry weight basis, were much lower when topsoil had been removed, about 3.7 and 2.4 for M. p. utilis and M. deeringiana respectively, compared to 6.2 and 3.3 where topsoil was retained. Removal of topsoil led to reduced Mg and to increased Al concentrations in roots, and to increased levels of Mn and Al in shoots. In the second year no effect of lime or residual effect of P application was found on growth of Mucuna or Imperata. Removal of the topsoil had little effect on the growth of weeds after the cover crop had been harvested. Due to the high Al tolerance of Imperata, reclamation by Mucuna will be less effective if the topsoil has been lost by erosion.     

HIV envelope protein inhibits MHC class I presentation of a cytomegalovirus protective epitope

CTL recognize peptides that derive from viral protein Ags by proteolytic processing and are presented by MHC class I molecules. In this study we tested whether coexpression of viral Ags in the same cell leads to competition between them. To this end, two L(d)-restricted epitopes derived from HIV-1 envelope gp160 (ENV) and from CMV pp89 phosphoprotein were coexpressed. HIV ENV strain IIIB, but not MN variant, impaired recognition by specific CTL of CMV pp89 epitope 9pp89. Susceptibility to inhibition after ENV coexpression was inversely related to the amount of antigenic 9pp89 peptide processed from different antigenic constructs. In line with it, competition decreased the yield of naturally processed antigenic 9pp89 peptide bound to MHC class I molecules in coinfected cells. Also, point mutants of the presenting MHC class I molecule differed in their competition pattern. Collectively, the data imply that competition operates at the step of MHC-peptide complex assembly or stabilization. We conclude that, although not the rule, in certain combinations there is interference between different Ags expressed in the same cell and presented by the same MHC class I allele. These studies have implications for vaccine development and for understanding immunodominance.     

Metabolomics approach for analyzing the effects of exercise in subjects with type 1 diabetes mellitus

The beneficial effects of exercise in patients with type 1 diabetes (T1D) are not fully proven, given that it may occasionally induce acute metabolic disturbances. Indeed, the metabolic disturbances associated with sustained exercise may lead to worsening control unless great care is taken to adjust carbohydrate intake and insulin dosage. In this work, pre- and post-exercise metabolites were analyzed using a (1)H-NMR and GC-MS untargeted metabolomics approach assayed in serum. We studied ten men with T1D and eleven controls matched for age, body mass index, body fat composition, and cardiorespiratory capacity, participated in the study. The participants performed 30 minutes of exercise on a cycle-ergometer at 80% VO(2)max. In response to exercise, both groups had increased concentrations of gluconeogenic precursors (alanine and lactate) and tricarboxylic acid cycle intermediates (citrate, malate, fumarate and succinate). The T1D group, however, showed attenuation in the response of these metabolites to exercise. Conversely to T1D, the control group also presented increases in α-ketoglutarate, alpha-ketoisocaproic acid, and lipolysis products (glycerol and oleic and linoleic acids), as well as a reduction in branched chain amino acids (valine and leucine) determinations. The T1D patients presented a blunted metabolic response to acute exercise as compared to controls. This attenuated response may interfere in the healthy performance or fitness of T1D patients, something that further studies should elucidate.     

A H NMR metabolic profiling to the assessment of protein tyrosine phosphatase 1B role in liver regeneration after partial hepatectomy

Protein tyrosine phosphatase 1B (PTP1B) is a negative regulator of the tyrosine kinase growth factor signaling pathway, which is involved in major physiological mechanisms such as liver regeneration. We investigate early hepatic metabolic events produced by partial hepatectomy (PHx) for PTP1B deficient (PTP1B KO) and wild type (WT) mice using proton nuclear magnetic resonance spectroscopy. Metabolic response of the two genotypes produced 24 h upon PHx is compared using magic angle spinning high-resolution nuclear magnetic resonance (¹H-HR-MAS-NMR) on intact liver tissues. In addition, genotype-associated metabolic profile changes were monitored during the first 48 h after PHx using high-resolution nuclear magnetic resonance (¹H-HR-NMR) on liver extracts. A marked increase of lipid-related signals in regenerating livers was observed after 24 h PHx in either intact tissues or liver extracts studies. In spite of this common initial metabolic response, results obtained 48 h after PHx on liver extracts indicate a genotype-differential metabolic pattern. This metabolic pattern resulted in line with well known regenerative features such as more sustained cell proliferation, a better management of lipids as energy fuel and lessened liver injury for PTP1B KO mice as compared to WT. Taken together, these findings suggest the metabolic basis to the pivotal role of PTP1B in liver regeneration.     

A long N-terminal-extended nested set of abundant and antigenic major histocompatibility complex class I natural ligands from HIV envelope protein

Viral antigens complexed with major histocompatibility complex (MHC) class I molecules are recognized by cytotoxic T lymphocytes on infected cells. Assays with synthetic peptides identify optimal MHC class I ligands often used for vaccines. However, when natural peptides are analyzed, more complex mixtures including long peptides bulging in the middle of the binding site or with carboxyl extensions are found, reflecting lack of exposure to carboxypeptidases in the antigen processing pathway. In contrast, precursor peptides are exposed to extensive cytosolic aminopeptidase activity, and fewer than 1% survive, only to be further trimmed in the endoplasmic reticulum. We show here a striking example of a nested set of at least three highly antigenic and similarly abundant natural MHC class I ligands, 15, 10, and 9 amino acids in length, derived from a single human immunodeficiency virus gp160 epitope. Antigen processing, thus, gives rise to a rich pool of possible ligands from which MHC class I molecules can choose. The natural peptide set includes a 15-residue-long peptide with unprecedented 6 N-terminal residues that most likely extend out of the MHC class I binding groove. This 15-mer is the longest natural peptide known recognized by cytotoxic T lymphocytes and is surprisingly protected from aminopeptidase trimming in living cells.     

Tolerance and avoidance of Al toxicity by Mucuna pruriens var. utilis at different levels of P supply

Previous laboratory experiments showed that velvet bean Mucuna pruriens is moderately tolerant to the presence of Al (up to 185 µM) in the root environment, but that it only develops a shallow root system in acid soils. Field experiments showed that Mucuna can tolerate acid subsoil conditions in a homogeneous root environment, but avoids subsoil if topsoil is present. Subsequent split-root experiments with a recirculating nutrient solution showed that this subsoil avoidance may be based on an Al avoidance mechanism in the root system. This Al avoidance mechanism, however, was not evident when phosphorus (P) supply to the whole plant was adequate. We thus hypothesized that surface application of P may help to overcome Al avoidance in the subsoil.In a field experiment on an ultisol in Lampung (Indonesia), only a moderate increase in aboveground biomass production was found for a wide range of P application rates, although the soil was low in available P, and the P adsorption isotherm was very steep. An increased P status of the topsoil and an increased P concentration in the aboveground biomass (from 50 to 75 mmol kg^-1) had no effect on root development in the subsoil.