草鱼血液的研究

本文报道了212尾池养草鱼Ctenopharyngodon idellus的血液中红细胞数、自细胞数、血红蛋白值、红细胞脆性值、比积及比重值、血细胞沉降率、白细胞分类计数和各型血细胞体的大小等正常数值和上述常数值在雌雄个体上的差异,以及鱼体年龄和繁殖季节产卵前后的差异等,为草鱼血液的常数值提供了较为系统的资料。     

Pseudomonas tolaasii in mushroom (Agaricus bisporus) crops: activity of formulations of 2-bromo-2-nitropropane-1,3-diol (bronopol) against the bacterium and the use of this compound to control blotch disease

The bactericidal activity of 2-bromo-2-nitropropane-1,3-diol (bronopol) against Pseudomonas tolaasii , the causative organism of mushroom bacterial blotch, is enhanced by the addition of Tween 80, EDTA and phenylethanol. Results of tests with this pseudomonad confirm that bronopol is more active in alkaline solutions and enhancement of the bactericidal activity of this compound can be obtained by adding calcium carbonate, or mushroom casing (limestone and peat). Quantitative observations show that sterility can be achieved with bronopol at 100 µg/ml in 24 h following artificial inoculation of casing with Ps. tolaasii in glass flasks. On miniature mushroom beds in controlled environments a single application of bronopol, in tap water during routine watering, controls bacterial blotch disease. Bronopol is a slow-acting bactericide, destroying Ps. tolaasii in mushroom casing and effecting control of bacterial blotch disease.     

Fine Structure of Oocyst Transformation and the Sporozoites of Leucocytozoon dubreuili*

SYNOPSIS. The sporogonic stages of Leucocytozoon dubreuili in the midgut and salivary glands of the simuliid vectors was studied by electron microscopy. Young uninucleate oocysts have a pellicle that initially resembles that of the ookinetc. Numerous electron-dense bodies and microtubules in the peripheral cytoplasm may be involved in the formation of the cyst wall. The dense bodies appear to give rise to the amorphous material of the wall. The tubules which run circumferentially beneath the oocyst's boundary probably serve as a skeletal support for the cell surface during deposition of the wall material. A subcapsular “space” which provides area for expansion of the developing sporozoites is formed in early multinucleate oocysts. The subcapsular “space” appears to be formed through a condensation of the peripheral cytoplasm, resulting in an osmotic gradient across the oocyst's limiting membrane. Consequently water diffuses out, creating a fluid-filled space. Sporozoite formation begins with localized thickenings on the oocyst's limiting membrane. Subsequent extension of the thickened regions into the subcapsular “space” marks the onset of sporozoite budding. The process is highly synchronized, and culminates with the production of up to 150 sporozoites about the sporoblastoid body. The structure of sporozoites from mature oocysts and of the salivary glands of the vector is basically similar, although salivary gland sporozoites are more elongate and have numerous electron-dense micronemes. The paired rhoptries in the latter sporozoites are more elongate and uniformly electron-dense than in oocyst sporozoites.     

Sensitive fluorescence in situ hybridization signal detection in maize using directly labeled probes produced by high concentration DNA polymerase nick translation

The signal produced by fluorescence in situ hybridization (FISH) often is inconsistent among cells and sensitivity is low. Small DNA targets on the chromatin are difficult to detect. We report here an improved nick translation procedure for Texas red and Alexa Fluor 488 direct labeling of FISH probes. Brighter probes can be obtained by adding excess DNA polymerase I. Using such probes, a 30?kb yeast transgene, and the rp1, rp3 and zein multigene clusters were clearly detected.     

Biodeterioration of Mayan buildings at uxmal and tulum,Mexico

Uxmal and Tulum are two important Mayan sites in the Yucatan peninsula. The buildings are mainly composed of limestone and grey/black discoloration is seen on exposed walls and copious greenish biofilms on inner walls. The principal microorganisms detected on interior walls at both Uxmal and Tulum were cyanobacteria; heterotrophic bacteria and filamentous fungi were also present. A dark‐pigmented mitosporic fungus and Bacillus cereus, both isolated from Uxmal, were shown to be acidogenic in laboratory cultures. Cyanobacteria belonging to rock‐degrading genera Synechocystis and Gloeocapsa were identified at both sites. Surface analysis previously showed that calcium ions were present in the biofilms on buildings at Uxmal and Tulum, suggesting the deposition of biosolubilized stone. Apart from their potential to degrade the substrate, the coccoid cyanobacteria supply organic nutrients for bacteria and fungi, which can produce organic acids, further increasing stone degradation.     

不同生态型摩西球囊霉菌株对蜈蚣草砷吸收的影响

砷超富集植物——蜈蚣草无论是在野外或是在室内均能被丛枝菌根真菌(AM真菌)侵染,但其对蜈蚣草砷吸收及转运的机理尚不清晰.本研究将分离于湖南省郴州市金川塘某铅锌尾矿蜈蚣草根际土壤(Glomus mosseae BGC GD01,简称污染菌株)和云南省未污染土壤(G.mosseae BGC YN05,简称非污染菌株)的2种摩西球囊霉菌株分别接种于非污染生态型和污染生态型蜈蚣草根际,8周后利用菌根化蜈蚣草幼苗在浓度为100 μmol·L-1砷(Na2HAsO4·7H2O)营养液中进行为期24 h的水培试验.结果表明,2种生态型摩西球囊霉菌株分别与蜈蚣草形成中等程度侵染,侵染率为25.2％ ～31.3％.无论是接种污染菌株或是非污染菌株,均明显促进了蜈蚣草根部对磷的吸收.在24 h水培试验期间,接种非污染菌株显著促进了蜈蚣草根部砷的吸收,但接种污染菌株对蜈蚣草根部砷吸收的促进作用有限,说明AM真菌对蜈蚣草砷吸收存在种内差异.     

呼吸活性的下降可解释水分亏缺对银合欢根瘤固氮酶活性的抑制(英)

在温室条件下研究了水分亏缺对银合欢根瘤的水分关系、固氮酶活性（乙炔还原活性）、呼吸活性以及蔗糖代谢有关酶活性的影响。随着土壤含水量的下降,根瘤水势也相继下降。土壤干旱不但显著地抑制了根瘤乙炔还原的活性,而且对根瘤的呼吸活性、ATP的产生以及催化蔗糖降解的碱性转化酶和蔗糖合成酶的活性也具强烈的抑制作用。然而,根瘤可溶性总糖含量则不受土壤干旱的影响。用呼吸抑制剂DNP处理根瘤后,其固氮酶活性、呼吸活性及ATPI含量都受到极显著的抑制。这都表明,水分胁迫对根瘤呼吸活性及ATP产生的抑制可解释干旱条件下固氮酶活性的下降。     

Identification of conformational B-cell Epitopes in an antigen from its primary sequence

Background

One of the major challenges in the field of vaccine design is to predict conformational B-cell epitopes in an antigen. In the past, several methods have been developed for predicting conformational B-cell epitopes in an antigen from its tertiary structure. This is the first attempt in this area to predict conformational B-cell epitope in an antigen from its amino acid sequence.

Results

All Support vector machine (SVM) models were trained and tested on 187 non-redundant protein chains consisting of 2261 antibody interacting residues of B-cell epitopes. Models have been developed using binary profile of pattern (BPP) and physiochemical profile of patterns (PPP) and achieved a maximum MCC of 0.22 and 0.17 respectively. In this study, for the first time SVM model has been developed using composition profile of patterns (CPP) and achieved a maximum MCC of 0.73 with accuracy 86.59%. We compare our CPP based model with existing structure based methods and observed that our sequence based model is as good as structure based methods.

Conclusion

This study demonstrates that prediction of conformational B-cell epitope in an antigen is possible from is primary sequence. This study will be very useful in predicting conformational B-cell epitopes in antigens whose tertiary structures are not available. A web server CBTOPE has been developed for predicting B-cell epitope http://www.imtech.res.in/raghava/cbtope/.