ECG signal denoising using higher order statistics in Wavelet subbands

In this work, we propose a novel denoising method based on evaluation of higher-order statistics at different Wavelet bands for an electrocardiogram (ECG) signal. Higher-order statistics at different Wavelet bands provides significant information about the statistical nature of the data in time and frequency. The fourth order cumulant, Kurtosis, and the Energy Contribution Efficiency (ECE) of signal in a Wavelet subband are combined to assess the noise content in the signal. Accordingly, four denoising factors are proposed. Performance of the denoising factors is evaluated and compared with the soft thresholding method. The filtered signal quality is assessed using Percentage Root Mean Square Difference (PRD), Wavelet Weighted Percentage Root Mean Square Difference (WWPRD), and Wavelet Energy-based Diagnostic Distortion (WEDD) measures. It is observed that the proposed denoising scheme not only filters the signal effectively but also helps retain the diagnostic information.     

Blockade of hypoxia-reoxygenation-mediated collagen type I expression and MMP activity by overexpression of TGF-beta1 delivered by AAV in mouse cardiomyocytes

Transforming growth factor (TGF)-beta(1) is one of the most pleiotropic and multifunctional peptides known. While the cardioprotective effect of TGF-beta(1) during ischemia is well known, the specific role of TGF-beta(1) in altering the cardiac remodeling process remains unclear. This study was designed to examine the regulation of hypoxia-reoxygenation-mediated collagen type I expression and activity of matrix metalloproteinases (MMPs) by overexpression of TGF-beta(1) in cultured HL-1 mouse cardiomyocytes. TGF-beta(1) was overexpressed in cardiomyocytes by transfection with adeno-associated virus (AAV)/TGF-beta(1)(Latent) or with AAV/TGF-beta(1)(ACT) (active TGF-beta(1)). Twenty-four hours of hypoxia followed by 3 h of reoxygenation (H-R) markedly enhanced (pro)collagen type I expression and activity of MMPs concomitant with an increase in reactive oxygen species (ROS) release and LOX-1 expression. Overexpression of TGF-beta(1) reduced these alterations induced by H-R. TGF-beta(1) overexpression also blocked H-R-mediated p38 and p44/42 MAPK activation. Transfection with AAV/TGF-beta(1)(ACT) was superior to that with AAV/TGF-beta(1)(Latent). These data for the first time demonstrate that H-R induces signals for cardiac remodeling in cardiomyocytes and TGF-beta(1) can modulate, possibly via antioxidant mechanism, these signals. These findings contribute to further understanding of the role of TGF-beta(1) in the cardiac remodeling process.     

Lifespan and stress resistance of Caenorhabditis elegans are increased by expression of glutathione transferases capable of metabolizing the lipid peroxidation product 4-hydroxynonenal

Caenorhabditis elegans expresses a glutathione transferase (GST) belonging to the Pi class, for which we propose the name CeGSTP2-2. CeGSTP2-2 (the product of the gst-10 gene) has the ability to conjugate the lipid peroxidation product 4-hydroxynonenal (4-HNE). Transgenic C. elegans strains were generated in which the 5'-flanking region and promoter of gst-10 were placed upstream of gst-10 and mGsta4 cDNAs, respectively. mGsta4 encodes the murine mGSTA4-4, an enzyme with particularly high catalytic efficiency for 4-HNE. The localization of both transgenes was similar to that of native CeGSTP2-2. The 4-HNE-conjugating activity in worm lysates increased in the order: control相似文献   

Mesp1 Patterns Mesoderm into Cardiac,Hematopoietic, or Skeletal Myogenic Progenitors in a Context-Dependent Manner

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Wavelet weighted blood vessel distortion measure for retinal images

In this paper, a novel wavelet transform based blood vessel distortion measure (WBVDM) is proposed to assess the image quality of blood vessels in the processed retinal images. The wavelet analysis of retinal image shows that different wavelet subbands carry different information about the blood vessels. The WBVDM is defined as the sum of wavelet weighted root of the normalized mean square error of subbands expressed in percentage. The proposed WBVDM is compared with other wavelet based distortion measures such as wavelet mean square error(WMSE), Relative WMSE(Rel WMSE) and root of the normalized WMSE(RNWMSE). The results show that WBVDM performs better in capturing the blood vessel distortion. For distortion in clinically nonsignificant regions, the proposed WBVDM shows a low value of 1.1676 compared to a large mean square error value of 7.9909. The evaluation of correlation using Pearson linear correlation coefficient (PLCC) and Spearman rank order correlation coefficient (SROCC) shows a higher value for the correlation between WBVDM and subjective score. The experimental observations show that WBVDM is able to capture the distortion in blood vessels more effectively and responds weakly to the distortion inherent in the other retinal features.     

Wavelet threshold based ECG compression using USZZQ and Huffman coding of DSM

In this paper, a new Wavelet threshold based ECG signal compression technique using uniform scalar zero zone quantizer (USZZQ) and Huffman coding on differencing significance map (DSM) is proposed. Wavelet coefficients are selected based on the energy packing efficiency of each sub-band. Significant Wavelet coefficients are quantized with uniform scalar zero zone quantizer. Significance map is created to store the indices of the significant coefficients. This map is encoded efficiently with less number of bits by applying Huffman coding on the differences between indices in the significance map. ECG records from the MIT-BIH arrhythmia database are selected as test data. For the record 117, the proposed technique achieves a compression ratio of 18.7:1 with lower percentage root mean square difference (PRD) compared to other threshold based methods. The proposed technique is tested for MIT-BIH arrhythmia record 119 and a compression ratio of 21.81:1 is achieved with a PRD value of 3.716% which is much lower compared to the reported PRD value of 5.0 and 5.5% of set partitioning in hierarchical tress (SPIHT) and analysis by synthesis ECG compressor (ASEC), respectively. The noise eliminating capability of the proposed technique is also demonstrated in this work. The proposed technique achieves the required compression ratio with less reconstruction error for GSM-based cellular telemedicine system.     

Regulation of TGFbeta1-mediated collagen formation by LOX-1: studies based on forced overexpression of TGFbeta1 in wild-type and lox-1 knock-out mouse cardiac fibroblasts

Transforming growth factor beta(1) (TGFbeta(1)) activation leads to tissue fibrosis. Here, we report on the role of LOX-1, a lectin-like 52-kDa receptor for oxidized low density lipoprotein, in TGFbeta(1)-mediated collagen expression and underlying signaling in mouse cardiac fibroblasts. TGFbeta(1) was overexpressed in wild-type (WT) and LOX-1 knock-out mouse cardiac fibroblasts by transfection with adeno-associated virus type 2 vector carrying the active TGFbeta(1) moiety (AAV/TGFbeta (ACT)(1)). Transfection of WT mouse cardiac fibroblasts with AAV/TGFbeta (ACT)(1) markedly enhanced the expression of NADPH oxidases (p22(phox), p47(phox), and gp91(phox) subunits) and LOX-1, formation of reactive oxygen species, and collagen synthesis, concomitant with an increase in the activation of p38 and p44/42 mitogen-activated protein kinases (MAPK). The TGFbeta(1)-mediated increase in collagen synthesis was markedly attenuated in the LOX-1 knock-out mouse cardiac fibroblasts as well as in WT mouse cardiac fibroblasts treated with a specific anti-LOX-1 antibody. Treatment with anti-LOX-1 antibody also reduced NADPH oxidase expression and MAPK activation. The NADPH oxidase inhibitors and gp91phox small interfering RNA reduced LOX-1 expression, MAPK activation, and collagen formation. The p38 MAPK inhibitors as well as the p44/42 MAPK inhibitors reduced collagen formation without affecting LOX-1 expression in cardiac fibroblasts. These observations suggest that collagen synthesis in cardiac fibroblasts involves a facilitative interaction between TGFbeta(1)-NADPH oxidase and LOX-1. Further, the activation of MAPK pathway appears to be downstream of TGFbeta(1)-reactive oxygen species-LOX-1 cascade.     

Wavelet threshold based TDL and TDR algorithms for real-time ECG signal compression

In this paper, two novel and simple, target distortion level (TDL) and target data rate (TDR), Wavelet threshold based ECG compression algorithms are proposed for real-time applications. The issues on the use of objective error measures, such as percentage root mean square difference (PRD) and root mean square error (RMSE) as a quality measures, in quality controlled/guranteed algorithm are investigated with different sets of experiments. For the proposed TDL and TDR algorithm, data rate variability and reconstructed signal quality is evaluated under different ECG signal test conditions. Experimental results show that the TDR algorithm achieves the required compression data rate to meet the demands of wire/wireless link while the TDL algorithm does not. The compression performance is assessed in terms of number of iterations required to achieve convergence and accuracy, reconstructed signal quality and coding delay. The reconstructed signal quality is evaluated by correct diagnosis (CD) test through visual inspection. Three sets of ECG data from three different databases, the MIT-BIH Arrhythmia (mita) (F_s=360 Hz, 11 b/sample), the Creighton University Ventricular Tachyarrhythmia (cuvt) (F_s=250 Hz, 12 b/sample) and the MIT-BIH Supraventricular Arrhythmia (mitsva) (F_s=128 Hz, 10 b/sample), are used for this work. For each set of ECG data, the compression ratio (CR) range is defined. The CD value of 100% is achieved for CR ≤12, CR ≤ 8 and CR ≤ 4 for data from mita, cuvt and mitsva databases, respectively. The experimental results demonstrate that the proposed TDR algorithm is suitable for real-time applications.     

Dietary vitamin-E modulates antioxidant defence system in giant freshwater prawn, Macrobrachium rosenbergii

The objectives of the present study were to determine the effect of supplementary vitamin-E (200, 400 and 600 mg/kg feed) on lipid peroxidation (LPX) and antioxidant defence system in gills and hepatopancreas of the freshwater prawn, Macrobrachium rosenbergii. Results indicated that vitamin-E inhibited LPX in the hepatopancreas in a comparatively lower dose than gills. Superoxide dismutase (SOD) activity was decreased significantly in gills in response to all the three supplemented diet, but in hepatopancreas decrease was observed only in response to higher doses of vitamin-E (400 and 600 mg/kg feed). Catalase (CAT) activity was reduced significantly only in gills but not in hepatopancreas. While glutathione peroxidase (GPX) activity was significantly elevated in the hepatopancreas by vitamin-E, its activity remains unaltered in gills. On the contrary, glutathione reductase (GR) activity was decreased in gills but that of hepatopancreas was constant. Glutathione (GSH) content of both gills and hepatopancreas was substantially elevated in the vitamin-E supplemented prawns. Although the ascorbic acid (ASA) content of gills was unchanged by vitamin-E, its level elevated significantly in hepatopancreas. Thus the findings of the present investigation suggest that dietary vitamin-E is capable of reducing LPX level and can modulate antioxidant defence system in gills and hepatopancreas, nevertheless, the response is highly tissue specific. It is further observed that highest dose of vitamin-E (600 mg/kg feed) could not render much additional protection in both the tissues.