From hybrids to hermaphrodites in population genetics

A report on the 46th annual PopGroup conference, Glasgow, UK, December 18-21, 2012.     

Cancer: Towards a general theory of the target

General theories (GT) are reductionist explications of apparently independent facts. Here, in reviewing the literature, I develop a GT to simplify the cluttered landscape of cancer therapy targets by revealing they cluster parsimoniously according to only a few underlying principles. The first principle is that targets can be only exploited by either or both of two fundamentally different approaches: causality‐inhibition, and ‘acausal’ recognition of some marker or signature. Nonetheless, each approach must achieve both of two separate goals, efficacy (reduction in cancer burden) and selectivity (sparing of normal cells); if the mechanisms are known, this provides a definition of rational treatment. The second principle is target fragmentation, whereby the target may perform up to three categoric functions (cytoreduction, modulation, cytoprotection), potentially mediated by physically different target molecules, even on different cell types, or circulating freely. This GT remains incomplete until the minimal requirements for cure, or alternatively, proof that cure is impossible, become predictable.     

Contemporary parasite stress curvilinearly correlates with outgroup trust: Cross-country evidence from 2005 to 2014

General trust is trust extended to people from outside one's immediate social network. Two studies have tested a parasite stress explanation of general trust using cross-cultural data, showing a linear negative correlation between parasite stress and trust in “most people.” However, recent studies suggest that 1) trust in most people as a measure of general trust confounds ingroup trust and outgroup trust in cross-cultural surveys and 2) parasite stress can curvilinearly correlate with variables of ingroup embeddedness and outgroup avoidance. Using data from the World Value Survey (WVS) Waves 5 and 6 (N?=?117,370 from 80 countries and geopolitical regions), we found no evidence that parasite stress—measured either as contemporary non-sexually-transmitted-disease (non-STD) stress or as historical pathogen prevalence—curvilinearly correlated with ingroup trust. However, parasite stress significantly curvilinearly correlated with outgroup trust, and the two-line test confirmed that the correlation was U-shaped. This research extends previous work on parasite stress and trust, informs the recent debate on whether parasite stress relates to outgroup avoidance, and suggests directions for developing the parasite stress theory of values and sociality.     

Human Perceptual and Phobic Biases for Snakes: A Review of the Experimental Evidence

In this paper I review the literature on the evolutionary origins of phobias and describe the current state of research on the neurobiology and developmental origins of ophidiophobia—fear of snakes. In doing so I compare experimental evidence related to evolutionary explanations for snake fears and phobias which are outlined in Seligman’s Preparedness Theory and Isbell’s Snake Detection Theory. These theories have been tested extensively using a variety of experimental paradigms aimed at determining the “innateness” of snake fears, the neural pathways involved in fear responses to snakes, and the perceptual biases associated with snake stimuli. However, in the vast majority of these experiments, the stimuli presented are photographs of snakes rather than the real thing. I argue that this point of methodology, while ironically supportive of the findings, is based on some assumptions about cognition and consciousness which run counter to neuroscience. In understanding human responses to snakes, we need to understand better the interplay between cognition and consciousness and how these represent a pluralism of mind in which perception is much more than we think.     

Linking dispersal, immigration and scale in the neutral theory of biodiversity

In the classic spatially implicit formulation of Hubbell's neutral theory of biodiversity a local community receives immigrants from a metacommunity operating on a relatively slow timescale, and dispersal into the local community is governed by an immigration parameter m . A current problem with neutral theory is that m lacks a clear biological interpretation. Here, we derive analytical expressions that relate the immigration parameter m to the geometry of the plot defining the local community and the parameters of a dispersal kernel. Our results facilitate more rigorous and extensive tests of the neutral theory: we conduct a test of neutral theory by comparing estimates of m derived from fits to empirical species abundance distributions to those derived from dispersal kernels and find acceptable correspondence; and we generate a new prediction of neutral theory by investigating how the shapes of species abundance distributions change theoretically as the spatial scale of observation changes. We also discuss how our main analytical results can be used to assess the error in the mean-field approximations associated with spatially implicit formulations of neutral theory.     

Hydrated Intercalation for High‐Performance Aqueous Zinc Ion Batteries

Aqueous zinc ion batteries (AZIBs) are steadily gaining attention based on their attractive merits regarding cost and safety. However, there are many obstacles to overcome, especially in terms of finding suitable cathode materials and elucidating their reaction mechanisms. Here, a mixed‐valence vanadium oxide, V₆O₁₃, that functions as a stable cathode material in mildly acidic aqueous electrolytes is reported. Paired with a zinc metal anode, this material exhibits performance metrics of 360 mAh g^?1 at 0.2 A g^?1, 92% capacity retention after 2000 cycles, and 145 mAh g^?1 at a current density of 24.0 A g^?1. A combination of experiments and density functional theory calculations suggests that hydrated intercalation, where water molecules are cointercalated with Zn ions upon discharge, accounts for the aforementioned electrochemical performance. This intercalation mechanism facilitates Zn ion diffusion throughout the host lattice and electrode–electrolyte interface via electrostatic shielding and concurrent structural stabilization. Through a correlation of experimental data and theoretical calculations, the promise of utilizing hydrated intercalation as a means to achieve high‐performance AZIBs is demonstrated.     

韧性：三角洲地区规划转型的新理念

三角洲地区经过近几十年的快速发展,在城市建设方面取得举世瞩目的成就,然而长期积累的生态问题也更加突出,暴露出的空间脆弱性问题日益显著。面对自然基底脆弱、自然灾害扰动趋势增强等因素在时空上的高度叠合,迫切需要提升三角洲地区应对未来不确定性扰动的能力。首先从景观角度分析三角洲地区自然环境的特殊性,提出韧性规划是对现有三角洲地区规划转型的论点,认为鲁棒性、适应性、学习—转化能力是三角洲地区韧性规划的核心能力,系统性、协同性、底线性、预判性是三角洲地区韧性规划的主要思维特征。其次,进一步从优化整体格局、构建流动性载体、加强对韧性技术策略的研究和应用、重视跨尺度协作与管理等方面提出了构建“格局—连通—关键点”的韧性规划框架。最后,阐述韧性规划作为三角洲地区规划转型的新理念,应用于具体案例的空间布局时须以人为本,依托自然环境,以自然流动性为规划导向;须基于预判式过程,充分构想能够应对不同情景的预案;须整合生态智慧与现代技术,明晰兼顾鲁棒性与适应性的功能分区管治体系。     

基于景观感知的自然教育环境设计策略与要素研究

景观感知作为自然教育非常重要的组成部分,其研究内容受到广泛关注,但现有研究仍处于初步阶段,未对自然教育环境设计起到应有的支撑作用。从景观感知角度,综合环境教育学、环境心理学及行为心理学等相关理论,对基于景观感知的自然教育环境的营建提出了针对性原则及策略,并着重探讨影响景观感知的设计要素。首次从景观感知角度对自然教育环境设计进行探讨,对自然教育环境的营建具有指导意义。 关键词：风景园林;自然教育;景观感知     

Assessing the causes of diversification slowdowns: temperature‐dependent and diversity‐dependent models receive equivalent support

Diversification rates vary over time, yet the factors driving these variations remain unclear. Temporal declines in speciation rates have often been interpreted as the effect of ecological limits, competition, and diversity dependence, emphasising the role of biotic factors. Abiotic factors, such as climate change, are also supposed to have affected diversification rates over geological time scales, yet direct tests of these presumed effects have mainly been limited to few clades well represented in the fossil record. If warmer climatic periods have sustained faster speciation, this could explain slowdowns in speciation during the Cenozoic climate cooling. Here, we apply state‐of‐the art diversity‐dependent and temperature‐dependent phylogenetic models of diversification to 218 tetrapod families, along with constant rate and time‐dependent models. We confirm the prevalence of diversification slowdowns, and find as much support for temperature‐dependent than diversity‐dependent models. These results call for a better integration of these two processes in studies of diversification dynamics.