Prevalence and antimicrobial resistance in Salmonella enterica isolated from broiler chickens,pigs and meat products in Thailand–Cambodia border provinces

This study aimed to examine the prevalence and antimicrobial resistance (AMR) of Salmonella isolates from broiler chickens, pigs and their associated meat products in the Thailand–Cambodia border provinces. A total of 941 samples were collected from pigs and broiler chickens at slaughter houses and from carcasses at local fresh markets in Sa Kaeo, Thailand (n = 554) and Banteay Meanchey, Cambodia (n = 387) in 2014 and 2015. From these samples, 345 Salmonella isolates were collected from Sa Keao (n = 145; 23%) and Banteay Meanchey (n = 200; 47%) and assayed for antimicrobial susceptibility, class 1 integrons and extended‐spectrum β‐lactamase (ESBL) genes. Serovars Typhimurium (29%) and Rissen (29%) were the most common serotypes found in Thai and Cambodian isolates, respectively. Multidrug resistance was detected in 34% and 52% of isolates from Sa Keao and Banteay Meanchey, respectively. The majority of the Thai isolates were resistant to ampicillin (72.4%), whereas most Cambodian isolates were resistant to sulfamethoxazole (71%). Eleven isolates from Sa Keao and 44 from Banteay Meanchey carried class 1 integrons comprising resistance gene cassettes. The most common gene cassette array was dfrA12‐aadA2 (61.1%). Six isolates were ESBL producers. The β‐lactamase genes found included bla_TEM‐1, bla_CTX‐M‐55 and bla_CMY‐2. Some of these class 1 integrons and ESBL genes were located on conjugative plasmid. In conclusion, multidrug‐resistant Salmonella are common in pigs, chickens and their products in the Thailand–Cambodia border provinces. Our findings indicate that class 1 integrons play a role in spread of AMR in the strains in this study.     

Activation Status of Receptor Tyrosine Kinases as an Early Predictive Marker of Response to Chemotherapy in Osteosarcoma

Receptor tyrosine kinases (RTKs) are membrane receptors that play a vital role in various biological processes, in particular, cell survival, cell proliferation, and cell differentiation. These cellular processes are composed of multitiered signaling cascades of kinases starting from ligand binding to extracellular domains of RTKs that activate the entire pathways through tyrosine phosphorylation of the receptors and downstream effectors. A previous study reported that, based on proteomics data, RTKs were a major candidate target for osteosarcoma. In this study, activation profiles of six candidate RTKs, including c-Met, c-Kit, VEGFR2, HER2, FGFR1, and PDGFRα, were directly examined from chemonaive fresh frozen tissues of 32 osteosarcoma patients using a multiplex immunoassay. That examination revealed distinct patterns of tyrosine phosphorylation of RTKs in osteosarcoma cases. Unsupervised hierarchical clustering was calculated using Pearson uncentered correlation coefficient to classify RTKs into two groups—Group A (c-Met, c-Kit, VEGFR2, and HER2) and Group B (FGFR1 and PDGFRα)—based on tyrosine phosphorylation patterns. Nonactivation of all Group A RTKs was associated with shorter overall survival in stage IIB osteosarcoma patients. Percentages of tumor necrosis in patients with inactive Group A RTKs were significantly lower than those in patients with at least one active Group A RTK. Paired primary osteosarcoma cells with fresh osteosarcoma tissue were extracted and cultured for cytotoxicity testing. Primary cells with active Group A RTKs tended to be sensitive to doxorubicin and cisplatin. We also found that osteosarcoma cells with active Group A RTKs were more proliferative than cells with inactive Group A RTKs. These findings indicate that the activation pattern of Group A RTKs is a potential risk stratification and chemoresponse predictor and might be used to guide the optimum chemotherapy regimen for osteosarcoma patients.     

Permian and Triassic Radiolaria from Northwest Thailand: paleogeographical implications

Well-preserved radiolarians were recovered from seven sections in the Mae Hong Son-Mae Sariang area, northwestern Thailand. 51 species assigned to 34 genera are identified, including 1 new species (Triassospongosphaera erici Feng sp. nov.) and 19 unidentified species. They are divided into the Late Permian, late Ladinian and middle Carnian radiolarian assemblages. Newly identified radiolarian assemblages, together with the published radiolarian biostratigraphic data from this region, indicate that there was a pelagic basin during the Late Paleozoic and Triassic. This basin was joined to the Chiang Dao and Changning-Menglian oceanic basins, and they represent the main oceanic basin of the Paleotethyan Archipelago Ocean. This main oceanic basin was situated in the traditional “Shan-Thai Block”. Therefore, “the Shan-Thai Block” was not a single block during that stage, but composed of the Paleotethyan Ocean and two continental terranes that were affiliated with the Gondwana and Cathaysian domains, respectively.     

Morphological and Molecular Characterization of a New Root-Knot Nematode,Meloidogyne thailandica n. sp. (Nematoda: Meloidogynidae), Parasitizing Ginger (Zingiber sp.)

A root-knot nematode Meloidogyne thailandica n. sp. was discovered on roots of ginger (Zingiber spp.) intercepted from Thailand in October 2002 by the U.S. Department of Agriculture Animal and Plant Health Inspection Service at the port of San Francisco. Comparison by light microscopy (LM) and scanning electron microscopy (SEM) to five other morphologically related species (M. incognita, M. arenaria, M. microcephala, M. megatyla, and M. enterolobii) revealed that the new species differs from these by one or more of the following: body, tail and hyaline tail length, shape of head, tail and tail terminus of second-stage juveniles; stylet length and shape of spicules in males; perineal pattern, stylet length and shape of knobs in females. The distinctive perineal pattern is oval to rectangular, with smooth to moderately wavy and coarse striae, and with characteristic radial structures present underneath the pattern area; the dorsal arch is high, sometimes round to rectangular, and striae in and around the anal area form a thick network-like pattern interrupted by lateral lines and large phasmids. Second-stage juveniles have a long, slender tail and long, gradually tapering hyaline tail region ending in a rounded terminus. Male spicules commonly have an acutely angled shaft with a bidentate terminus. Molecular data from the ribosomal large subunit D3 expansion segment revealed four haplotypes, two of which were unique and distinguish M. thailandica n. sp. from M. arenaria, M. incognita, and M. javanica.     

Middle Permian Ostracods from Tak Fa Limestone, Phetchabun Province, Central Thailand

This paper presents the first Permian ostracod fauna discovered in Thailand. The ostracods are recovered from the Tak Fa Limestone (Middle Permian) in Phetchabun province, central Thailand. The ostracods belong to eight genera and 15 species. Four species are newly described: Sargentina phetchabunensis nov. sp., Geffenina bungsamphanensis nov. sp., Reviya subsompongensis nov. sp. and Bairdia takfaensis nov. sp. The ostracod assemblages characterize a shallow marine, near shore environment at the time of deposition. Except for one species, which shows palaeobiogeographical links between Central Thailand and South China, all the other species are endemic.     

Effects of wave exposure on population and reproductive phenology of an algal turf, Gelidium pusillum (Gelidales,Rhodophyta), Songkhla,Thailand

The effect of wave exposure on the population and reproductive phenology of the common red alga, Gelidium pusillum (Stackhouse) Le Jolis, was investigated between July 2003 and June 2004, at Suan Song Tha Le, Songkla Province, Thailand. Lengths of thalli, percentage cover, percentage of reproductive fronds and the number of reproductive structures were examined monthly in relation to different degrees of wave exposure (sheltered vs. exposed), temperature, rainfall, day length and tidal cycles. Frond length and percentage cover of G. pusillum were different among sites and seasons. Shorter fronds were found on the exposed shore which had a greater percentage cover. Fronds bleached and died off during the summer months (April and May), which resulted in shorter fronds and reduced percentage cover in June. The thalli reproduced throughout the year, with a predominance of tetrasporophytes. The highest percentage of tetrasporic fronds was 33% in February 2004 and 13% of cystocarpic fronds in April 2004, but male gametophytic fronds were never observed. Rainfall showed a strongly negative influence on reproduction since no reproductive fronds were observed during the rainy season (R² = 0.49, P = 0.01). The dominance of G. pusillum at this study site and throughout elsewhere in turf habitats might be a function of persistent vegetative growth, densely clumped, and the ability to reproduce almost throughout the entire year.     

<Emphasis Type="Italic">Nepenthes</Emphasis> group <Emphasis Type="Italic">Montanae</Emphasis> (Nepenthaceae) in Indo-China,with <Emphasis Type="Italic">N. thai</Emphasis> and <Emphasis Type="Italic">N. bokor</Emphasis> described as new

Summary  A key is presented to the Nepenthes group Montanae in Peninsular Malaysia, Thailand and Cambodia. Nepenthes bokor Cheek is described from Cambodia and Nepenthes thai Cheek from peninsular Thailand. The affinities of both taxa are discussed and their conservation status assessed.     

Anchitrema sanguineum (Digenea: Anchitrematidae) Accidentally Found during Colonoscopy of a Patient with Chronic Abdominal Pain: A Case Report

In November 2007, a 46-year-old male Thai patient presented with chronic abdominal pain for over 3 years. Colonoscopy revealed a small parasite of about 2 × 1 mm in size attached to the cecum mucosa. The worm was removed endoscopically, fixed, and stained for morphological observations. The specimen was identified as Anchitrema sanguineum (Digenea: Anchitrematidae), a trematode first reported in a reptile, Chamaeleo vulgaris, from Egypt, and then sporadically found in the intestines of insectivorous bats and other mammals. The patient was treated with praziquantel but no more worms were found in his stool. His symptoms improved slightly but not cured completely. It remains unclear whether the chronic abdominal pain of the patient was caused by this trematode infection. Whatever is the pathogenicity of this trematode, this is the first human case of A. sanguineum infection in the literature.     

Wickerhamomyces edaphicus sp. nov. and Pichia jaroonii sp. nov., two ascomycetous yeast species isolated from forest soil in Thailand

Four yeast strains were isolated from soil in a mixed deciduous forest in Amphoe Wang Nam Khiao, Nakhon Ratchasima province, Thailand. On the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, and the sequence analyses of the D1/D2 domain of the large-subunit (LSU) rRNA gene, small-subunit rRNA gene and internal transcribed spacer (ITS) region, the three strains (S-29, S-63 and S-80) were found to represent a single species of the genus Wickerhamomyces , which were named Wickerhamomyces edaphicus sp. nov. The type strain is S-29^T (BCC 21231^T=NBRC 101969^T=CBS 10408^T). Strain S-75 represented a novel species of the genus Pichia on the basis of morphological, biochemical, physiological and chemotaxonomic characteristics, and the sequence analyses of the D1/D2 domain of the LSU rRNA gene, for which the name Pichia jaroonii sp. nov. is proposed. The type strain is S-75^T (BCC 23061^T, NRBC 102180^T=CBS 10930^T).     

亚洲土著类群硅藻鼠科的演化

硅藻鼠科是仅分布于亚洲的啮齿类类群,头骨具豪猪型咬肌结构,下颌则为松鼠型。该类群代表了一个从梳趾鼠类分化出的区域性支系,虽与豪猪次目相近,但并不是它的成员。最早的硅藻鼠化石记录发现于Baluchistan渐新世陆相地层中,稍晚的记录发现于南业晚渐新世。印度次大陆连续的地层为该科的演化历史提供了主要的化石依据。早中新世晚期至中中新世,硅藻科化石也发现了泰国、中国以及日本。其后的硅藻鼠种类少且鲜有化石记录。晚中新世早期在巴基斯坦有一个种,中国南部晚中新世也可能有一个种。尽管在最早的化石地点发现的标本较多,但其后的时段内除泰国李盆地外化石并不丰富,这指示了其特殊的生活习性或其生活区域化石保存的偏差。已知的化石记录并没有指示出该类群的多样性,也可能是缺少石化作用的结果。硅藻鼠类在水系外围区域延续生存与最近在老挝中部多岩石地带发现的现生Laonastes也是一个硅藻鼠的假设相一致。