‘Big data’ from shrinking pathogen populations

Falling costs for genome sequencing and genotyping mean that population genomic data sets are becoming commonplace for a wide variety of species. Once these data are used for the initial tasks of investigating population structure and demographic history, however, is there reason to go back for more? In this issue of Molecular Ecology, Nkhoma et al. (2013) explore the applications of longitudinal genomic diversity data for detecting changes in the prevalence and transmission of the Plasmodium falciparum malaria parasite in South‐East Asia. While this study finds several genetic signatures indicative of reduced disease transmission, other measures, such as short‐term effective population size, geographical population structure and heterozygosity, were not informative. These results indicate the potential contribution of genomic data to the surveillance of small, dynamic populations, whether they are at risk of extinction or targeted for elimination. The interpretation of such data will require close consideration of biological context, however, at both the species and the population level.     

Il Conte G. B. Samaritani (1821–1894) e le Sue Raccolte Botaniche in Egitto ed in Oriente

Abstract

Bryophytes are excellent indicator organisms for monitoring environmental changes to which they could be more sensitive than vascular plants but our knowledge on their adaptation to alpine conditions is still very poor. Research programmes were set up to establish the ecological parameters for bryophyte distribution along the altitudinal gradient as well as for a better understanding of the population biology of alpine bryophytes.     

Carnivorous mammals as seed dispersers of Myrtus communis (Myrtaceae) in the Mediterranean shrublands

ABSTRACT

The role of carnivorous mammals as seed dispersers of Myrtus communis L. in the Mediterranean environment was studied. Seeds of M. communis were found in faeces of red fox (Vulpes vulpes L.) and carnivores from the genus Martes, at four sites on the Tyrrhenic coast of Southern Italy in the period autumn-winter 1993–1995. All the study sites are covered by Mediterranean shrublands with M. communis as one of the dominant species. Content analysis of fox scats showed that fruits of M. communis constitute a relevant component of the diet of these carnivores, although other food categories were also well represented. Further investigations on the effect of mammal digestion on seed germinability showed that carnivores not only moved the seeds away from the mother plant but also enhanced their germinability. This species was known to be bird- and ant-dispersed and the adaptive implications of a multi-vectorial seed dispersal process is discussed.     

斑纹小贻贝(Mytella strigata)基础生物学与生物入侵

生物入侵是继栖息地破坏之后，全球生物多样性丧失的第二大驱动因素。近年来，原产于南美洲地区的斑纹小贻贝（Mytella strigata）在印度-西太平洋海区被陆续报道，而我国台湾、广东、海南、福建、广西等省份同样发现斑纹小贻贝，且其已经建立可自我维持的种群。但是，作为一种新型入侵生物，斑纹小贻贝尚未引起国内海洋管理部门和科研人员足够重视，亟待查明其在我国沿海的分布现状、扩散趋势和生态影响等，为斑纹小贻贝的检测、监测、防控和管理提供科学依据。综述了斑纹小贻贝的基础生物学特征和全球生物入侵现状，发现国内的斑纹小贻贝源于南美洲加勒比海地区，于2014年左右通过船舶压舱水或船体生物污损的形式侵入我国南方沿海并迅速扩散。此外，斑纹小贻贝在我国的生物入侵处于"引进-传播"阶段，即将大规模扩繁，因此亟需开展应急清除行动。     

Die Entwicklung der Zellforschung

Obwohl erst im 17. Jahrhundert begonnen, hat die Zellforschung doch bald zur Formulierung allgemein-biologischer Theorien geführt und trägt auch heute ständig weiter zu fundamentalen Theorienbildungen bei. Die Entwicklung der Zellforschung verdient daher als Paradigma für die Gewinnung naturwissenschaftlicher Einsichten besonderes Interesse: An ihr können Grundbedingungen wissenschaftlichen Erkenntnisfortschrittes gut verdeutlicht werden als Wechselspiel von Methodenerweiterung und Konzeptualisierung des Neuentdeckten. Erst eineinhalb Jahrhunderte nach der Erstbeobachtung von Zellen gelang die Formulierung der “Zellentheorie”. Auf der durch sie geschaffenen, konzeptionellen Grundlage war es vielen biologischen und medizinischen Disziplinen möglich, von einem beobachtend-beschreibenden (“induktiven”) zu einem experimentierenderklärenden (“deduktiven”) Status vorzustoßen. Ein außergewöhnlicher Erfolg war dabei der Cytogenetik beschieden. Dagegen war der Versuch, in den subzellulären und submikroskopischen Bereich vorzudringen, nur teilweise erfolgreich (Polarisationsmikroskopie, Nägelis Micellartheorie). Ein breiter Durchbruch gelang in diesem Sektor erst um 1950 durch eine beinahe einmalige zeitliche Kumulierung methodischer Fortschritte, wobei vor allem Zellfraktionierung und Elektronenmikroskopie eine entscheidende Rolle spielten. Zusammen mit der vorausgegangenen Entwicklung “flankierender” Wissenschaften (insbesondere der Makromolekularen Chemie) wurde so die Etablierung der modernen Zellbiologie möglich. Einige ihrer bedeutendsten Aussagen werden diskutiert (Zellkompartimentierung und genetische Kontinuität ohne Nucleinsäuren; Zweiteilung der Organismenwelt nach der Zellorganisation; Evolution zellulärer Organismen und Symbiontentheorie). Abschließend wird versucht, Bedingungen und Erfordernisse von wissenschaftlichem Fortschritt allgemein zu formulieren und daran die heutige Wissenschaftswirklichkeit kritisch zu messen.     

Successful captive breeding of Mitchell's water monitor,Varanus mitchelli (Mertens 1958), at Perth Zoo

Mitchell's water monitors (Varanus mitchelli) have been maintained on display at Perth Zoo since 1997. They are generally a timid species but have been maintained and bred in a mixed species water feature exhibit. In this article we describe their captive management and behavior with an insight into their reproductive biology. Between 2002 and 2005, 11 clutches were laid ranging from 13 to 27 (X? = 20) eggs from one female. Egg size ranged between 3.00 and 6.08 g (X? = 4.77 g) in weight, 22.8 and 31.9 mm (X? = 28.3 mm) in length, and 11.1 and 19.3 mm (X? = 17.1 mm) in width. Oviposition included double and triple clutches ranging between 41 and 60 days apart (X? = 48 days), events n = 6. Four clutches were incubated at three different temperatures and hatchlings emerged after 157–289 days. The weight of the hatchlings ranged between 2.60 and 4.52 g (X? = 4.34 g). Total length ranged between 140.1 and 178.0 mm (X? = 165.9 mm) and snout–vent length ranged from 53.8 to 70.0 (X? = 64.4 mm). Juvenile growth and development information is presented from hatching through to approximately 3 years of age. Zoo Biol 29:615–625, 2010. © 2009 Wiley‐Liss, Inc.