Identifying areas of high importance for orchid conservation in east Macedonia (NE Greece)

The establishment of a network of reserves is of fundamental importance to the loss of biodiversity. Seven different area selection methods for the establishment of a reserve network were applied in the present study: (a) 5% cut-off value of the grid cells with the highest species richness or conservation value, (b) complementarity analysis using as criteria species richness or conservation value or rarest species richness, and (c) mixed complementarity analysis using as criteria species richness or conservation value. These methods were applied in the orchid taxa of east Macedonia. The conservation values of taxa were estimated on the basis of regional rarity, broad-scale rarity, and species specialization. The spatial overlap between the resulting networks and the Natura 2000 network of the study area was assessed. Furthermore, the efficiency of the latter network to protect the orchid taxa of the study area was examined. Our results suggest that: (a) a multiscale estimation of rarity is necessary for the unbiased estimation of species conservation values; (b) species specialization adds valuable ecological information to the assessment of taxa conservation values; (c) complementarity and mixed complementarity analyses on species richness or conservation value safeguard all the taxa of the region; (d) complementarity analysis on the basis of the richness of the rarest species safeguards all the rarest taxa, but not the total number of the remaining taxa; (e) the 5% cut-off value on species richness or conservation value fails to protect all the taxa of the region, including a large number of the rarest taxa; and (f) the Natura 2000 network, despite its large coverage in the study area, fails to safeguard all the taxa, including some of the rarest.     

Influence of rocky landscape features and fire regime on vegetation dynamics in Appalachian Quercus forests

Question : How do interactions between rocky landscape features and fire regime influence vegetation dynamics? Location : Continental Eastern USA. Methods : We measured vegetation, disturbance and site characteristics in 40 pairs of rocky and non‐rocky plots: 20 in recently burned stands, and 20 in stands with no evidence of recent fire (‘unburned’ stands). Two‐way analysis of variance (ANOVA) was used to assess the main and interaction effects of fire and rock cover on plant community composition. Results : In burned stands, rock cover had a strong influence on vegetation. Non‐rocky ‘matrix’ forests were dominated by Quercus, and had abundant ground cover and advance regeneration of early and mid‐successional tree species. Burned rocky patches supported greater density of fire‐sensitive species such as Acer rubrum, Sassafras albidum and Nyssa sylvatica and had little advance regeneration or ground cover. Quercus had fewer fire scars and catfaces (open, basal wounds) on rocky patches, suggesting that rocky features mitigate fire severity. In unburned stands, differences between rocky and non‐rocky patches were less distinct, with both patch types having sparse ground cover, little tree regeneration, and high understorey densities of relatively shade tolerant A. rubrum, N. sylvatica and Betula lenta. Conclusion : Under a sustained fire regime, heterogeneity in rock cover created a mosaic where fire‐adapted species such as Quercus dominate the landscape, but where fire‐sensitive species persisted in isolated pockets of lower fire severity. Without fire, species and landscape richness may decline as early‐mid successional species are replaced by more shade tolerant competitors.     

系统发育信息学及网络资源

系统发育信息学是近年来形成的新的学科方向,是系统学研究领域的一个新兴生长点。系统发育信息学是存贮、管理、注释、开发和加工系统树及其相关生物学信息的交叉学科。它的方法是基于计算机和网络技术,包括大型系统树及其相关生物学数据库的建立,系统树数据库网络的构架,系统树的可视化显示,小系统树的联合与超树的建立、用户查询、搜索和下载等,最终目的是要建立一个囊括地球上所有生物的系统树及其相关信息的数据库,将各种生物在树上精确定位,并进一步通过对系统发育信息的查询、搜索、联合与分析,从中获取生命进化的知识和进行生物学的预测。目前可用的系统发育网络资源主要有CIPRes和系统发育软件(PhylogenyPrograms)网站,已建立的系统发育信息学数据库包括TreeBASE,TreeofLife,Species2000,NCBITaxonomy数据库等。     

胶质芽孢杆菌HM8841紫外线诱变育种研究

以胶质芽孢杆菌HM8841作为出发菌株,通过紫外线诱变和突变菌株性能测定,选育出3株适合生产发酵的优良菌种。与出发菌株相比,突变株具有缩短发酵周期,提高发酵水平,增强芽孢抗逆性能等特点。     

基于PACS的医学图像压缩

从PACS和DICOM的定义出发,对基于PACS的医学图像压缩的要求和算法等方面作了阐述,还介绍了JPEG2000在医学图像压缩中的优势。     

Preparation of an antibody that recognizes and neutralizes Dictyostelium differentiation-inducing factor-1

In the development of the cellular slime mold Dictyostelium discoideum, the differentiation-inducing factor-1 (DIF-1; 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one) plays an important role in the regulation of cell differentiation and chemotaxis; however, the cellular signaling systems involving DIF-1 remain to be elucidated. To obtain a probe for DIF-1, we synthesized a DIF derivative (DIF-1-NH₂; 6-amino-1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one), and prepared an anti-DIF-1 antibody using a DIF-1-NH₂-conjugated macromolecule as the immunogen. A 100-fold dilution of the antibody bound to DIF-1-NH₂-conjugated resin, and this binding was inhibited by co-addition of 20 μM DIF-1 or DIF-1-NH₂. In a monolayer culture of HM44 cells, a DIF-deficient D. discoideum strain, 0.5 nM exogenous DIF-1 induced stalk cell formation in ∼60% of the cells; this induction was dose-dependently inhibited by the antibody (diluted 12.5- or 25-fold). Furthermore, this inhibition by the antibody was recovered by co-addition of 2.5 or10 nM DIF-1. The results indicate that the anti-DIF-1 antibody recognizes DIF-1 and neutralizes its function.     

An index of functional diversity

Abstract. Functional diversity has been seen as the key to predicting the stability, invasibility, resource capture, nutrient cycling and productivity of communities. However, it has been unclear how to estimate it. Ten criteria for an index of functional diversity are developed. These include that it should reflect the range of characters present and the abundance of the species with those characters in the community, and be unaffected by the measurement units used or by the number of species. An index that meets all ten criteria, FD_var, is investigated. It is based on the variance in characters, weighted by the abundance of the species with those characters. Tested with artificial and randomly generated data, it showed reasonable use of the 0 ‐ 1 range (mean 0.60, range 0.0009 ‐ 0.975) and intuitive behaviour. Tested with field data from eight sites in New Zealand, it gave a good spread of values (mean 0.65, range across sites 0.34 ‐ 0.84), showed good ability to distinguish between the communities and its performance was ecologically intuitive. Illustrative correlations are made with mean annual temperature and soil fertility, determined by a bio‐assay. FD_var is recommended for general use.     

NATURA 2000 – The influence of the European directives on the development of nature-based sport and outdoor recreation in mountain areas

In all member countries of the European Community, the influence of European directives is increasing. This is especially the case with directives on the conservation of natural habitats and wild fauna and flora (European Council Directive 92/43 EEC from 1992 (Council of the European Union 1992) and the directive on the conservation of wild birds (European Council directive 79/409 EEC from 1979 (Council of the European Union 1979). These directives are expected to influence the future development of nature-based sport and outdoor recreation significantly. Many German sport organisations are expecting negative consequences for the future development of nature-based sport in mountain areas. This paper summarises key findings of a study commissioned by the German Sport Association.

This project develops guidelines for the application and interpretation of these directives, as well as for their practicable use and management. The study shows that the potential negative effects of nature-based sport and outdoor recreation activities can be categorised into three general types. Furthermore, large sport events should be evaluated separately in the future. Finally, the crucial role of management plans is discussed, which are essential if NATURA 2000 areas are to be established successfully. The management plan assists in the selection of suitable measures, helps to resolve conflicts, and increases the level of acceptance and its transparency for the public. This paper will demonstrate that the consultation and participation of local people including members of sport and recreational organisations is essential to achieve the best result in the interest of nature conservation in general and conservation of endangered habitats or species specifically.     

Typology and ecology of Californian serpentine annual grasslands

Abstract. A first classification for serpentine annual grasslands distributed throughout northern and central California is proposed. This study has followed the Braun‐Blanquet phyto‐sociological system based on floristical, biogeographical and bioclimatic features of the sampled areas. Numerical analyses of classification and ordination were applied to the floristic relevés. Minimum Variance Clustering grouped relevés into basic classification units that allowed us to define low‐hierarchical syntaxonomical units (associations) and ‘communities’. A Principal Coordinate Analysis was used to extract those ecological parameters related to the axes that separate those classification units from the previous dendrogram. The results showed that differences in species composition was mainly due to a continentality gradient and the shady effect of an overstory vegetation. On the basis of both analyses we propose a first syntaxonomic scheme on ultramafic (mainly serpentine) annual plant communities of the biogeographical Californian Region that comprises four associations, two subassociations and some provisional communities.     

Patterns of plant species and community diversity at different organization levels in a forested riparian landscape

Abstract. Integrated synusial phytosociology combined with traditional measures of diversity is used to describe the structure of vascular vegetation diversity along the forested riparian landscape of the upper Oise valley (Belgium and France). The two dimensions (longitudinal and lateral) of the geomorphological complex are examined at four scales: synusia, phytocoenosis, tesela and catena. The results support the following hypotheses: (1) the environmental gradients observed, particularly the lateral ones, are very complex; (2) there is a clear lack of coupling between the tree, shrub and herb layers, which indicates a differential response to the underlying influence of environmental controls; (3) moderate flooding‐induced disturbance enhances herb species richness; (4) stressful environments support a low plant species diversity but a high synusial richness; (5) natural factors (substrate, climate, disturbance) are more important at the synusia and phytocoenose scales, but (6) anthropogenic disturbances, mainly through forest and river management, are more important at the landscape level. By considering plant communities as structural‐dynamic entities of ecosystems in a landscape context, integrated synusial phytosociology provides a basis for decomposing a complex system since the different hierarchical levels are both nested and thus strongly relational and process‐based.