Gene selection for tumor classification using a novel bio-inspired multi-objective approach

Identifying the informative genes has always been a major step in microarray data analysis. The complexity of various cancer datasets makes this issue still challenging. In this paper, a novel Bio-inspired Multi-objective algorithm is proposed for gene selection in microarray data classification specifically in the binary domain of feature selection. The presented method extends the traditional Bat Algorithm with refined formulations, effective multi-objective operators, and novel local search strategies employing social learning concepts in designing random walks. A hybrid model using the Fisher criterion is then applied to three widely-used microarray cancer datasets to explore significant biomarkers which reveal the effectiveness of the proposed method for genomic analysis. Experimental results unveil new combinations of informative biomarkers have association with other studies.     

An analysis of Bat Hawk Macheiramphus alcinus diet in the Melaky Region of lowland western Madagascar

We present information on the prey taken by the Bat Hawk Macheiramphus alcinus in two different areas of lowland western central Madagascar. These are the first dietary data from Madagascar for this widespread Old World species. The recovered remains were almost exclusively of bats and birds, with a few examples of reptiles and insects. In total, 178 pellets were analysed. On the basis of minimum number of individuals and biomass, bats accounted for 58.3% and 30.3%, respectively, and birds 36.1% and 69.7%, respectively. Amongst the nine species of bats recovered from the pellets, four were represented by multiple individuals, particularly taxa belonging to the families Molossidae and Vespertilionidae that fly in open areas, and for the 11 species of identified birds, all were represented by a single individual. These patterns are interpreted as a specialisation of feeding on bats during a narrow window of time at dusk, as they leave day roost sites, and then using birds in a more general manner to fill in nutritional needs.     

新疆胀果甘草内生菌的分离和鉴定

对采自新疆的健康野生胀果甘草不同组织中的内生菌进行分离,确立了分离的条件为5%NaClO4浸5min,分离纯化得到149株细菌和2种真菌。通过形态学观察和革兰氏染色,细菌中芽孢杆菌为93株,杆状菌56株,使用法国梅里埃细菌自动鉴定仪对其进行鉴定,得到鉴定结果的细菌属于13个属,真菌显微形态鉴定属于Penicillium青霉菌属和Fusarium镰刀菌属。     

The pineal gland of nocturnal mammals

Summary In the pineal gland of the pipistrelle bat two different populations of pinealocytes and glial cells were observed electron microscopically. The pinealocytes of populations I and II differ in their content of metabolically active cell organelles. In the pinealocytes of population I, granular vesicles originating from the Golgi apparatus were found in the perikaryon and especially in the endings of the pinealocyte processes. Granular vesicles appeared to be more numerous in hibernating nulliparous females. The pinealocytes of population II are characterized by the presence of small cytoplasmic vacuoles, probably originating from cisternae of the granular endoplasmic reticulum and containing flocculent material of moderate electron density. The classification of the pinealocytes belonging to population II is discussed.This collaboration was initiated with the aid of an SRC European short visit grant to P.A.R.The study was supported by the Foundation for Medical Research, the Netherlands (FUNGO, 13-35-33)     

N-甲基-D-天冬氨酸(NMDA)及荷包牡丹碱对不同年龄蝙蝠下丘神经元听反应的影响

分别对出生后第２周和第４周的中华鼠耳蝠（Ｍｙｏｔｉｓｃｈｉｎｅｎｓｉｓ）中脑下丘中央核１２１个听神经元进行了考察,同时与成年动物进行比较。结果表明,微电泳ＮＭＤＡ对下丘中央核绝大部分听神经元（２周龄、４周龄和成年动物分别为９６％、９５％和９６％）具有易化性影响,表现为听反应脉冲发放率增加、反应阈值下降、频率调谐曲线增宽。ＮＭＤＡ的易化性效应部分地与动物的周龄相关,表现为对听反应阈值和听反应脉冲发放率的易化效应在出生后２－４周逐渐增强,但４周以后的易化效应趋缓;微电泳ＧＡＢＡＡ受体的特异性拮抗剂Ｂｉｃｕｃｕｌｉｎｅ,对神经元的听反应也呈现易化性影响,表现为听反应脉冲发放率增加,反应阈值降低和频率调谐曲线增宽等。实验结果还提示,ｂｉｃｕｃｕｌｉｎｅ对下丘神经元听反应的易化作用,在出生后早期呈持续增强趋势。ＮＭＤＡ和ｂｉｃｕｃｕｌｉｎｅ的效应与动物周龄之间的关系略有差异,是否提示着下丘中央核ＮＭＤＡ受体和ＧＡＢＡＡ受体在出生后的发育进程有所差别,尚待进一步探讨。     

Echo SPL, training experience, and experimental procedure influence the ranging performance in the big brown bat, Eptesicus fuscus

Four Eptesicus fuscus were trained in a range discrimination experiment to choose the closer of two phantom targets. Echo attenuation was roving between trials returning echoes ranging from −10 dB to −50 dB SPL (sound pressure level) relative to emission SPL. Discrimination thresholds were determined. After sufficient training, ranging performance was stable and about the same in the range between −20 dB and −50 dB with range difference thresholds around 300 μs. At −10 dB, performance was poor even after long training. After additional training at a constant relative echo SPL of −30 dB and a delay difference of 300 μs the performance measured with roving echo SPL improved at all relative echo SPL between −20 dB and −50 dB but not at −10 dB. The new experimental procedure improved the performance by additional learning, and the bats generalized over a wide range of relative echo SPL. Threshold improved to 100 μs when measured at a constant relative echo SPL of −30 dB, again indicating the influence of the experimental procedure. In correspondence to neurophysiological data the ranging performance deteriorates if the echo SPL is close to the emission SPL. Signal duration and emission SPL were variable during range discrimination. Accepted: 7 March 1998     

Echo SPL influences the ranging performance of the big brown bat,Eptesicus fuscus

Four bats of the species Eptesicus fuscus were trained in a two-alternative forced-choice procedure to discriminate between two phantom targets that differed in range. The rewarded stimulus was located at a distance of 52.7 cm, while the other unrewarded stimulus was further away. Only one target was presented at a time.In the first experiment we measured the range discrimination performance at an echo SPL of –28 dB relative to the bat's sonar transmission. A 75% correct performance level was arbitrarily defined as threshold and was obtained at a delay difference of 80 s, corresponding to a range difference of 13.8 mm.In the second experiment the delay difference was fixed at 150 s and the echo SPL varied between –8 and –48 dB relative to sonar emissions. The performance of the bats depended on the relative echo SPL. At –28 dB the bats showed the best performance. It deteriorated at an increase of the relative echo SPL to –18 dB and –8 dB. The performance also deteriorated when the relative echo SPL was reduced to –38 dB and –48 dB. Only at low relative echo SPLs did the bats partially compensate for the reduction in echo SPL and increased the SPL of their emitted signals by a few dB.Our results support the hypothesis that neurons exhibiting paradoxical latency shift may be involved in encoding target range. This hypothesis predicts a decrease in performance at high echo SPLs as we found it in our experiments. The observed reduction in performance at very low echo SPLs may be due to a decrease in S/N ratio.     

Substrate-gleaning versus aerial-hawking: plasticity in the foraging and echolocation behaviour of the long-eared bat,Myotis evotis

The foraging and echolocation behaviour of Myotis evotis was investigated during substrate-gleaning and aerial-hawking attacks. Bats gleaned moths from both the ground and a bark-covered trellis, however, they were equally adept at capturing flying moths. The calls emitted by M. evotis during substrate-gleaning sequences were short, broadband, and frequency-modulated (FM). Three behavioural phases were identified: search, hover, and attack. Gleaning search calls were significantly longer in duration, lower in highest frequency, and larger in bandwidth than hover/attack calls. Calls were detected in only 68% of gleaning sequences, and when they were emitted, bats ceased calling 200 ms before attacking. Terminal feeding buzzes, the rapid increase in pulse repetition rate associated with an attempted prey capture, were never recorded during gleaning attacks. The echolocation calls uttered by M. evotis during aerial-hawking foraging sequences were also short duration, high frequency, FM calls. Two distinct acoustic phases were identified: approach and terminal. Approach calls were significantly different from terminal calls in all variables measured. Calls were detected in 100% of aerial-hawking attacks and terminal feeding buzzes were invariably produced. Gleaning hover/attack calls were spectrally similar to aerial approach calls, but were shorter in duration and emitted at a significantly lower (but constant) repetition rate than aerial signals. Although the foraging environment (flight cage contents) remained unchanged between tasks (substrate-gleaning vs. aerial-hawking), bats emitted significantly lower amplitude calls while gleaning. We conclude that M. evotis adjusts its echolocation behaviour to meet the perceptual demands (acoustical constraints) imposed by each foraging situations.Abbreviations BW bandwidth - CF constant frequency - dB SPL decibels sound pressure level - FM frequency modulated - HF highest frequency - LF lowest frequency - PF peak frequency Presented at the meeting Acoustic Images in Bat Sonar, a conference on FM echolocation honoring Donald R. Griffin's contributions to experimental biology (June 14–16, Brown University, Providence RI).     

河南省洞栖蝙蝠的多样性与保护

2011 年6 月至2013 年7 月,利用雾网和抄网捕捉蝙蝠,采用直接计数、拍照等方法统计蝙蝠的数量,调查了河南省60 个洞穴中蝙蝠的种类、数量及分布,根据蝙蝠的外形及头骨特征鉴定种类,计3 科6 属17 种,其中易危(VU)物种3 种,近危(NT)和无危(LC)物种各7 种。马铁菊头蝠和菲菊头蝠为河南省广布种。依据洞穴的开发情况和人类入洞活动的频度等,评估洞穴的干扰程度,30 个洞穴属严重干扰,10 个洞穴属轻度干扰,20 个洞穴属自然状态。依据洞穴中蝙蝠的种类、数量及濒危程度,将洞穴的相对重要性划分为4 个级别,级别1 和多数级别2 的洞穴具有大的空间和复杂的洞穴系统,这些洞穴既是蝙蝠的繁殖地又是冬眠场所,其中栖息的蝙蝠种类多且数量大。对洞穴的总长度、最大宽度和最大高度进行了测量,比较4 个级别洞穴的测量数据,级别1 洞穴的总长度、最大宽度、最大高度的平均值明显大于其他级别。目前,多数洞穴未得到很好的保护,由于旅游开发等原因,洞栖蝙蝠正面临着严重的生存危机。