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11.
Plant Ecology - To analyse the impact of fire on plants, an experiment has been set up in a Quercus coccifera L. garrigue near Montpellier. The objectives of the study were to follow the changes of... 相似文献
12.
On the dynamics of vegetation: Markov chains as models of succession 总被引:12,自引:0,他引:12
Robert Van Hulst 《Plant Ecology》1979,40(1):3-14
13.
本文用Leslie矩阵模型研究了高寒草甸生态系统牲畜种群结构及动态。模型考虑了更加精确的年龄组转移关系,出栏率是种群波动的主要因子。目前,牲畜种群结构不合理,种群数量不能保持平衡。 相似文献
14.
Abstract. Regeneration levels, size class distributions and a nearest neighbour technique were used to describe apreliminary dynamics frameworkfortheplateauforests. Taken over a large area, most of the canopy dominants have a negative exponential distribution of stems > 10 cm dbh per size class. In small (0.04 ha) plots, if present as more than one stem, most species are present as both canopy (> 25 cm dbh) and understorey (10–15 cm dbh) individuals. The canopy dominants maintain their rank in the bank of advance regeneration (> 5 cm height < 10 cm dbh). However, relative numbers of all regeneration of most canopy individuals are not strongly correlated with canopy closure or local abundance of conspecific adults. The mean area of nearest neighbour polygons of canopy individuals around saplings of the more common species are small. In conclusion, most species appearto be shade tolerant and locally persistent conferring a fine grain on this forest. We support recent questioning of universality of the gaps/non gaps paradigm. 相似文献
15.
Comparison of amide proton exchange in reduced and oxidizedRhodobacter capsulatus cytochrome c2: A1H−15N NMR study 总被引:6,自引:0,他引:6
Summary The hydrogen-deuterium exchange rates of the reduced and oxidized forms ofRhodobacter' capsulatus cytochrome c2 were studied by1H–15N homonuclear multiple quantum correlation spectroscopy. Minimal differences were observed for the N- and C-terminal helices on changing redox state suggesting that although these helices are structurally important they do not affect the relative stability of the two redox states and hence may not be important in determining the redox potential differences observed amongst the class I c-type cytochromes. However, significant differences were observed for other regions of the protein. For example, all slow exchanging protons of the helix spanning Phe82 to Asp87 are similarly affected on reduction indicating that the unfolding equilibrium of this helix is altered between the two redox states. Other regions are not as simple to interpret; however, the difference in NH exchange rates between the redox states for a number of residues including His17, Leu37, Arg43, Ala45, Gly46, Ile57, Val58, Leu60, Gly61 and Leu100 suggest that interactions affecting the causes of these differences may be important factors in determining redox potential.Abbreviations NMR
nuclear magnetic resonance
- HMQC
homonuclear multiple quantum correlation
- NOESY
nuclear Overhauser effect spectroscopy 相似文献
16.
沙坡头人工固沙区的种子库动态 总被引:77,自引:0,他引:77
沙坡头人工固沙区的土壤种子库中共有46种植物的种子,属于17个科。其中菊科植物最多,达11种;其次为藜科,7种;禾本科7种;豆科4种。既是现有植被组分种,其种子又存在于种子库中的,占总种数的33.3% 。油蒿(Artem isia ordosica)、花棒(Hedysarum scoparium )和柠条(Caragana korshinskii)的种子产量为545±676.73粒/m 2、6.67±13.74粒/m 2、0.032±2.43×10- 3粒/m 2。油蒿在植株上成熟时不受虫害,而花棒、柠条的种子受害比例分别为31.92% 和83.29% 。在最适埋藏深度下,油蒿、柠条、花棒种子的累积发芽率分别可达78.3% 、85.0% 和66.7% ;萌发速度:油蒿> 柠条> 花棒。根据种子库动态分析和植被调查结果可初步预测:沙坡头人工固沙植被的演替趋向将是灌木以油蒿为主,草本以雾冰藜(Bassia dasyphylla)、小画眉草(Eragrostispoaeoides)为主的群落 相似文献
17.
Peter Allard Jüri Jarvet Anders Ehrenberg Astrid Gräslund 《Journal of biomolecular NMR》1995,5(2):133-146
Summary The peptide hormone motilin was synthesised with a 13C-enriched -carbon in the leucine at position 10. In aqueous solution, six different relaxation rates were measured for the 13C–H fragment as a function of temperature and with and without the addition of 30% (v/v) of the cosolvent d
2-1,1,1,3,3,3-hexafluoro-2-propanol (HFP). The relaxation rates were analysed employing the spectral density mapping technique introduced by Peng and Wagner [(1992) J. Magn. Reson., 98, 308–322] and using the model-free approach by Lipari and Szabo [(1982) J. Am. Chem. Soc., 104, 4546–4570]. The fit to various models of dynamics was also considered. Different procedures to evaluate the overall rotational correlation time were compared. A single exponential time correlation function was found to give a good fit to the measured spectral densities only for motilin in 30% (v/v) HFP at low temperatures, whereas at high temperatures in this solvent, and in D2O at all temperatures, none of the considered models gave an acceptable fit. A new empirical spectral density function was tested and found to accurately fit the experimental spectral density mapping points. The application of spectral density mapping based on NMR relaxation data for specific 13C–1H vector is shown to be a highly useful method to study biomolecular dynamics. Advantages are high sensitivity, high precision and uniform sampling of the spectral density function over the frequency range.Abbreviations CD
circular dichroism
- NOE
nuclear Overhauser enhancement
- NOESY
two-dimensional NOE spectroscopy
- INEPT
insensitive nuclei enhanced by polarisation transfer
- DANTE
delays alternating with nutations for tailored excitation
- WALTZ-16
wideband, alternating phase, low-power technique for zero residual splitting
- FID
Free induction decay
- ppm
parts per million
- TSPA
3-trimethylsilyl-(3,3,2,2-d)-propionic acid
- HFP
d
2-1,1,1,3,3,3-hexafluoro-2-propanol
- CPMG
Carr-Purcell-Meiboom-Gill
- TFD
time-resolved fluorescence depolarisation
- CSA
chemical shift anisotropy
Partly presented at the symposium Dynamics and Function of Biomolecules, Szeged, Hungary, July 31–August 2, 1993. 相似文献
18.
Ana Poveda Juan Luis Asensio Manuel Martín-Pastor and Jesús Jiménez-Barbero 《Journal of biomolecular NMR》1997,10(1):29-43
1H-NMR cross-relaxation rates and nonselectivelongitudinal relaxation times have been obtained at two magnetic fields (7.0and 11.8 T) and at a variety of temperatures for the branchedtetrasaccharide methyl3-O--N-acetyl-galactosaminyl--galactopyranosyl-(14)[3-O--fucosyl]-glucopyranoside (1), an inhibitor of astrocyte growth. Inaddition, 13C-NMR relaxation data have also been recorded atboth fields. The 1H-NMR relaxation data have been interpretedusing different motional models to obtain proton–proton correlationtimes. The results indicate that the GalNAc and Fuc rings display moreextensive local motion than the two inner Glc and Gal moieties, since thosepresent significantly shorter local correlation times. The13C-NMR relaxation parameters have been interpreted in termsof the Lipari–Szabo model-free approach. Thus, order parameters andinternal motion correlation times have been deduced. As obtained for the1H-NMR relaxation data, the two outer residues possess smallerorder parameters than the two inner rings. Internal correlation times are inthe order of 100 ps. The hydroxymethyl groups have also different behaviour,with the exocyclic carbon on the glucopyranoside unit showing the highestS2. Molecular dynamics simulations using a solvated systemhave also been performed and internal motion correlation functions have beendeduced from these calculations. Order parameters and interproton distanceshave been compared to those inferred from the NMR measurements. The obtainedresults are in fair agreement with the experimental data. 相似文献
19.
M. Heino V. Kaitala E. Ranta J. Lindstr?m 《Proceedings. Biological sciences / The Royal Society》1997,264(1381):481-486
We explore extinction rates using a spatially arranged set of subpopulations obeying Ricker dynamics. The population system is subjected to dispersal of individuals among the subpopulations as well as to local and global disturbances. We observe a tight positive correlation between global extinction rate and the level of synchrony in dynamics among thesubpopulations. Global disturbances and to a lesser extent, migration, are capable of synchronizing the temporal dynamics of the subpopulations over a rather wide span of the population growth rate r. Local noise decreases synchrony, as does increasing distance among the subpopulations. Synchrony also levels off with increasing r: in the chaotic region, subpopulations almost invariably behave asynchronously. We conclude that it is asynchrony that reduces the probability of global extinctions, not chaos as such: chaos is a special case only. The relationship between global extinction rate, synchronous dynamics and population growth rate is robust to changes in dispersal rates and ranges. 相似文献
20.
Alessandro Pintar Meike Hensmann Kornelia Jumel Maureen Pitkeathly Stephen E. Harding Iain D. Campbell 《European biophysics journal : EBJ》1996,24(6):371-380
The SH2 domain from Fyn tyrosine kinase, corresponding to residues 155–270 of the human enzyme, was expressed as a GST-fusion protein in a pGEX-E. coli system. After thrombin cleavage and removal of GST, the protein was studied by heteronuclear NMR. Two different phosphotyrosyl-peptides were synthesized and added to the SH2 domain. One peptide corresponded to the regulatory C-terminal tail region of Fyn. Sequence-specific assignment of NMR spectra was achieved using a combination of1H-15N-correlated 2D HSQC,15N-edited 3D TOCSY-HMQC, and15N-edited 3D NOESY-HMQC spectra. By analysis of the -proton chemical shifts and NOE intensities, the positions of secondary structural elements were determined and found to correspond closely to that seen in the crystal structure of the, homologous, Src-SH2 domain.To investigate the internal dynamics of the protein backbone, T1 and T2 relaxation parameters were measured on the free protein, as well as on both peptide complexes. Analytical ultracentrifugation and dynamic light scattering were employed to measure the effect of concentration and peptide-binding on self-association. The results suggest that, at NMR-sample concentrations, the free protein is present in at least dimeric form. Phosphopeptide binding and lower concentration significantly, but not completely, shift the equilibrium towards monomers. The possible role of this protein association in the regulation of the Src-family tyrosine kinases is discussed.Abbreviations SH
Src homology
- GST
glutathione-S-transferase
- IPTG
isopropyl--D-galactopyranoside
- DTT
dithiothreitol
- PMSF
phenyl-methyl-sulphonyl-fluoride
- TBS
50 mM Tris, 150 mM NaCl, 5 mM DTT, pH 8.0
- MWCO
molecular weight cut off
- NMR
nuclear magnetic resonance
- HSQC
heteronuclear single-quantum correlation
- NOESY
nuclear Overhauser effect spectroscopy 相似文献