烟粉虱传毒相关蛋白基因的克隆及其表达量分析

【目的】烟粉虱Bemisia tabaci(Gennadius)是一种世界性的入侵性害虫,其传播的番茄黄化曲叶病毒(Tomato yellow leaf curl virus,TYLCV)给我国番茄生产造成巨大经济损失。为了阐明烟粉虱传播双生病毒的机理,本文拟研究明确B和Q烟粉虱体内传毒相关蛋白Gro EL基因及其表达量。【方法】采用特异性引物克隆了B和Q烟粉虱内共生菌编码的传毒相关蛋白Gro EL基因,并进行序列分析;并利用荧光定量PCR技术检测两种生物型及其获取双生病毒前后该基因的相对表达量。【结果】烟粉虱内共生菌Hamiltonella编码的Gro EL基因全长为1 668 bp,编码555个氨基酸;B、Q烟粉虱该基因的核苷酸序列相似性为99.94%,氨基酸同源性为99.82%;带毒烟粉虱中Gro EL基因的表达量显著高于未带毒的对应生物型烟粉虱;无论带毒与否,Q烟粉虱该基因的表达量均显著高于B(P<0.05)。【结论】烟粉虱携带TYLCV后可诱导Gro EL的表达量升高,B和Q烟粉虱中Gro EL基因及其表达量均存在差异,这可能是B和Q烟粉虱传毒效率存在显著差异的原因之一。     

Molecular Evidence for the Association of Tomato leaf curl Gujarat virus with a Leaf Curl Disease of Phaseolus vulgaris L.

A leaf curl disease with symptoms typical of begomoviruses was observed in bean (Phaseolus vulgaris) at the Main Research Farm of the Indian Institute of Pulses Research, Kanpur, India. Infected plants had severe distortion of leaves and the plants were unproductive. PCR indicated the involvement of French bean leaf curl virus (JQ866297), a recently described Begomovirus, and Tomato leaf curl Gujarat virus (ToLCGV). The full‐length genome of ToLCGV associated with leaf curl disease of bean was 2757 nucleotides long and had maximum identity (97–98%) with seven isolates of ToLCGV (AY234383, AF449999, EU573714, GQ994098, AY190290, FR819708, AF413671) and is designated as Tomato leaf curl Gujarat virus‐(IN:Knp:Bean:2013) (KF440686). To the best of our knowledge, this is the first record of ToLCGV infecting a leguminous host, P. vulgaris.     

First Report of Myrothecium roridum Causing Leaf Spot on Anthurium andraeanum in China

A new severe disease on Anthurium andraeanum Lind. was observed in the summer of 2011 in Beijing, China. The fungus was isolated from symptomatic leaves, and its pathogenicity was confirmed. Based on the morphological characteristics and molecular analysis, the pathogen was identified as Myrothecium roridum Tode ex Fr. This is the first report of M. roridum causing leaf spot on A. andraeanum in China.     

CLAUSA restricts tomato leaf morphogenesis and GOBLET expression

Leaf morphogenesis and differentiation are highly flexible processes. The development of compound leaves is characterized by an extended morphogenesis stage compared with that of simple leaves. The tomato mutant clausa (clau) possesses extremely elaborate compound leaves. Here we show that this elaboration is generated by further extension of the morphogenetic window, partly via the activity of ectopic meristems present on clau leaves. Further, we propose that CLAU might negatively affect expression of the NAM/CUC gene GOBLET (GOB), an important modulator of compound‐leaf development, as GOB expression is elevated in clau mutants and reducing GOB expression suppresses the clau phenotype. Expression of GOB is also elevated in the compound leaf mutant lyrate (lyr), and the remarkable enhancement of the clau phenotype by lyr suggests that clau and lyr affect leaf development and GOB in different pathways.     

A molecular mechanism that confines the activity pattern of miR165 in Arabidopsis leaf primordia

In Arabidopsis leaf primordia, the expression of HD‐Zip III, which promotes tissue differentiation on the adaxial side of the leaf primordia, is repressed by miRNA165/166 (miR165/166). Small RNAs, including miRNAs, can move from cell to cell. In this study, HD‐Zip III expression was strikingly repressed by miR165/166 in the epidermis and parenchyma cells on the abaxial side of the leaf primordia compared with those on the adaxial side. We also found that the MIR165A locus, which was expressed in the abaxial epidermis, was sufficient to establish the rigid repression pattern of HD‐Zip III expression in the leaf primordia. Ectopic expression analyses of MIR165A showed that the abaxial‐biased miR165 activity in the leaf primordia was formed neither by a polarized distribution of factors affecting miR165 activity nor by a physical boundary inhibiting the cell‐to‐cell movement of miRNA between the adaxial and abaxial sides. We revealed that cis‐acting factors, including the promoter, backbone, and mature miRNA sequence of MIR165A, are necessary for the abaxial‐biased activity of miR165 in the leaf primordia. We also found that the abaxial‐determining genes YABBYs are trans‐acting factors that are necessary for the miR165 activity pattern, resulting in the rigid determination of the adaxial–abaxial boundary in leaf primordia. Thus, we proposed a molecular mechanism in which the abaxial‐biased patterning of miR165 activity is confined.     

Optimization of rotamers prior to template minimization improves stability predictions made by computational protein design

Computational protein design (CPD) predictions are highly dependent on the structure of the input template used. However, it is unclear how small differences in template geometry translate to large differences in stability prediction accuracy. Herein, we explored how structural changes to the input template affect the outcome of stability predictions by CPD. To do this, we prepared alternate templates by Rotamer Optimization followed by energy Minimization (ROM) and used them to recapitulate the stability of 84 protein G domain β1 mutant sequences. In the ROM process, side-chain rotamers for wild-type (WT) or mutant sequences are optimized on crystal or nuclear magnetic resonance (NMR) structures prior to template minimization, resulting in alternate structures termed ROM templates. We show that use of ROM templates prepared from sequences known to be stable results predominantly in improved prediction accuracy compared to using the minimized crystal or NMR structures. Conversely, ROM templates prepared from sequences that are less stable than the WT reduce prediction accuracy by increasing the number of false positives. These observed changes in prediction outcomes are attributed to differences in side-chain contacts made by rotamers in ROM templates. Finally, we show that ROM templates prepared from sequences that are unfolded or that adopt a nonnative fold result in the selective enrichment of sequences that are also unfolded or that adopt a nonnative fold, respectively. Our results demonstrate the existence of a rotamer bias caused by the input template that can be harnessed to skew predictions toward sequences displaying desired characteristics.     

文心兰浅绿条纹突变体的生理生化及叶绿素荧光特性研究

以文心兰浅绿条纹突变体为材料,分析叶片光合色素含量和组成、叶绿素合成前体物质含量以及叶绿素荧光参数的变化,观察突变体叶绿体超微结构的改变,以探寻其叶色变异的生理基础。结果表明:(1)突变体叶绿素a(Chl a)、叶绿素b(Chl b)、类胡萝卜素(Car)和总叶绿素(Chl)含量分别比叶色正常植株显著降低了37.1%、34.0%、30.8%和36.3%。(2)突变体叶绿素生物合成受阻于胆色素原(PBG)到尿卟啉原Ⅲ(UrogenⅢ)的反应步骤。(3)突变体叶绿体发育存在明显的缺陷,基粒数目及基粒片层的垛叠层数明显减少,嗜锇颗粒及囊泡较多。(4)突变体初始荧光(Fo)比正常植株高39%,最大荧光(Fm)、最大光化学效率(Fv/Fm)、PSⅡ有效光化学效率(Fv′/Fm′)和PSⅡ实际光化学效率(ΦPSⅡ)均显著低于正常植株,但光化学淬灭系数(qP)和非光化学淬灭系数(NPQ)与正常植株无显著差异。研究结果说明,文心兰叶绿素生物合成受阻和叶绿体结构发育不良,导致叶绿素的含量下降,致使突变体叶片呈现浅绿条纹,光能利用率降低。     

‘砀山酥梨’及其褐皮芽变果皮中多胺类物质含量和相关基因表达分析

为研究多胺类物质在‘砀山酥梨’芽变品系‘锈酥’果皮褐色形成中的作用,以‘砀山酥梨’和‘锈酥’花后不同时期果皮为试材,采用HPLC方法测定果皮中多胺类物质的含量,利用RACE技术克隆多胺合成过程中的关键基因,通过Protparam网站与MEGA5.0软件分析相关基因蛋白的理化性质及其系统进化,用荧光定量qRT-PCR方法分析不同时期果皮中相关基因的相对表达量。结果表明:(1)除花后50和150d外,其它时期‘砀山酥梨’果皮中腐胺含量均显著高于‘锈酥’,花后50d、75d、150d时,‘锈酥’果皮中的亚精胺、精胺含量显著高于‘砀山酥梨’果皮。(2)克隆出多胺合成的基因ADC、SPDS和SPMS(GenBank登录号分别为KM923903、KM923905和KM923906),预测ADC和SPMS均为水溶性蛋白、SPDS为疏水性蛋白,它们与苹果的亲缘关系最近。(3)荧光定量PCR结果显示,花后50d,多胺合成中ADC、SPDS和SPMS在‘锈酥’果皮中表达量均显著高于‘砀山酥梨’。研究推测,‘锈酥’果皮中多胺代谢及相关基因的上调表达可能与‘锈酥’的果皮褐色形成有关。     

中国野生百合叶表皮特征及系统学意义

利用光学显微镜和扫描电镜对20个野生百合种或变种的叶表皮进行了系统观察和比较分析,结果表明:(1)20种野生百合气孔器均分布于叶片远轴面,气孔器的长轴与远轴面细胞长轴方向一致,均位于远轴面细胞的端点处。气孔器形状从长椭圆形到近圆形不等;保卫细胞均为肾形,无副卫细胞,保卫细胞表面角质层均具条纹;表皮细胞角质层近于光滑或具条纹,均具蜡质,蜡质纹饰呈膜片状晶体或颗粒状;气孔密度、气孔器大小、近轴面远轴面细胞、垂周壁样式差异较大。(2)聚类分析表明,兰州百合、川百合、卷丹百合、紫斑百合、乳头百合、宝兴百合、山丹百合、大理百合、绿花百合、毛百合和有斑百合聚为类群Ⅰ;淡黄花百合、岷江百合和玫红百合3个野生种聚为类群Ⅱ;青岛百合单独为类群Ⅲ;宜昌百合、紫脊百合、通江百合、百合和野百合聚为类群Ⅳ,聚类结果总体上支持形态学分类的结果。(3)叶表皮形态对于区分野生百合不同种具有重要的分类学价值。     

大连市6种园林树种的光合固碳释氧特性

以大连市园林6种常用园林树种为研究材料,利用LI-6400便携式光合测定仪测定树木的光合生理生态指标,对6种树种的光合固碳释氧能力、光响应参数以及光合速率影响因子进行分析。结果表明:在不同季节同种植物的单位叶面积固碳释氧能力表现为夏季最强。日均单位叶面积固碳释氧能力由强到弱为龙爪槐(Sophora japonica var.pendula)合欢(Albizia julibrissin)光叶榉(Zelkova serrata)槲树(Quercus dentata)悬铃木(Platanus acerifolia)枫杨(Pterocarya stenoptera);日均单株固碳释氧能力由强到弱为悬铃木槲树合欢光叶榉枫杨龙爪槐。气孔导度、蒸腾速率、光合有效辐射和大气CO2浓度是影响光合速率的主要因子。悬铃木、合欢对环境的适应能力较强。根据树种的固碳释氧能力及生理特性,建议在大连地区进行绿化时优选悬铃木、合欢,槲树、龙爪槐也可作为高固碳树种推广。