郫县豆瓣发酵过程的微生物多样性及溯源分析

[目的] 解析郫县豆瓣及其酿造半成品-蚕豆醅与辣椒醅微生物多样性和来源,探究郫县豆瓣酿造过程风味化合物特征。[方法] 采用高通量测序法测定蚕豆醅、辣椒醅与混合醅（蚕豆醅-辣椒醅混合物,发酵成熟形成郫县豆瓣）在酿造过程中的微生物群落结构;利用高效气相质谱与高效液相色谱高通量检测蚕豆醅及辣椒醅中基础理化指标及挥发性、非挥发性风味化合物浓度;利用多种生物信息学分析方法对混合醅酿造微生物及风味化合物进行溯源。[结果] 微生物方面：44%–59%的混合醅细菌来源于辣椒醅,5%–22%的混合醅细菌来源于蚕豆醅,其他混合醅细菌来源未知。同时,42%–77%的混合醅真菌来源于辣椒醅,2%–18%的混合醅真菌来源于蚕豆醅,其他混合醅真菌来源未知。另外,16个细菌属由辣椒醅特异性贡献;2个细菌属及2个真菌属由蚕豆醅特异性贡献。化合物方面：1-辛烯-3醇（1-octen-3-ol）、苯乙醛（phenylacetaldehyde）、异丁醛（isobutyraldehyde）、苹果酸（malic acid）与糠醛（furfural）仅由蚕豆醅贡献。辣椒素（capsaicin）、3-甲基-1-丁醇（3-methyl-1-butanol）、已醇（hexanol）与异丁醇（isobutanol）仅由辣椒醅贡献。[结论] 郫县豆瓣发酵中大部分微生物来源于辣椒醅,大部分发酵底物（氨基酸及葡萄糖）来源于蚕豆醅。两种发酵半成品均特异性贡献微生物及风味化合物,形成郫县豆瓣的独特风味密码。     

Effects of forest types on leaf functional traits and their interrelationships of Pinus massoniana coniferous and broad‐leaved mixed forests in the subtropical mountain,Southeastern China

Leaf functional traits are widely used to detect and explain adaptations that enable plants to live under various environmental conditions. This study aims to determine the difference in leaf functional traits among four forest types of Pinus massoniana coniferous and broad‐leaved mixed forests by leaf morphological, nutrients, and stoichiometric traits in the subtropical mountain, Southeastern China. Our study indicated that the evergreen conifer species of P. massoniana had higher leaf dry matter content (LDMC), leaf C content, C/N and C/P ratios, while the three deciduous broad‐leaved species of L. formosana, Q. tissima, and P. strobilacea had higher specific leaf area (SLA), leaf N, leaf P nutrient contents, and N/P ratio in the three mixed forest types. The results showed that the species of P. massoniana has adapted to the nutrient‐poor environment by increasing their leaf dry matter for higher construction costs thereby reducing water loss and reflects a resource conservation strategy. In contrast, the three species of L. formosana, Q. tissima, and P. strobilacea exhibited an optimized resource acquisition strategy rather than resource conservation strategy in the subtropical mountain of southeastern China. Regarding the four forest types, the three mixed forest types displayed increased plant leaf nutrient contents when compared to the pure P. massoniana forest, especially the P. massoniana–L. formosana mixed forest type (PLM). Overall, variation in leaf functional traits among different forest types may play an adaptive role in the successful survival of plants under diverse environments because leaf functional traits can lead to significant effects on leaf function, especially for their acquisition of nutrients and use of light. The results of this study are beneficial to reveal the changes in plant leaf functional traits at the regional scale, which will provide a foundation for predicting changes in leaf traits and adaptation in the future environment.     

The evolutionary and molecular features of the broad-host-range plant pathogen Sclerotinia sclerotiorum

Sclerotinia sclerotiorum is a pathogenic fungus that infects hundreds of plant species, including many of the world's most important crops. Key features of S. sclerotiorum include its extraordinary host range, preference for dicotyledonous plants, relatively slow evolution, and production of protein effectors that are active in multiple host species. Plant resistance to this pathogen is highly complex, typically involving numerous polymorphisms with infinitesimally small effects, which makes resistance breeding a major challenge. Due to its economic significance, S. sclerotiorum has been subjected to a large amount of molecular and evolutionary research. In this updated pathogen profile, we review the evolutionary and molecular features of S. sclerotiorum and discuss avenues for future research into this important species.     

Characterization of a thermally stable and organic solvent-adaptative NAD+ -dependent formate dehydrogenase from Bacillus sp. F1

Aims: To characterize a robust NAD⁺‐dependent formate dehydrogenase firstly obtained from a nonmethylotroph, Bacillus sp. F1. Methods and Results: The Bacillus sp. F1 NAD⁺‐dependent formate dehydrogenase (BacFDH) gene was cloned by TAIL‐PCR and heterologous expressed in Escherichia coli. BacFDH was stable at temperatures below 55°C, and the half‐life at 60°C was determined as 52·9 min. This enzyme also showed a broad pH stability and retained more than 80% of the activities after incubating in buffers with different pH ranging from 4·5 to 10·5 for 1 h. The activity of BacFDH was significantly enhanced by some metal ions. Moreover, BacFDH exhibited high tolerance to 20% dimethyl sulfoxide, 60% acetone, 10% methanol, 20% ethanol, 60% isopropanol and 20% n‐hexane. Like other FDHs, BacFDH displayed strict substrate specificity for formate. Conclusion: We isolated a robust formate dehydrogenase, designated as BacFDH, which showed excellent thermal stability, organic solvent stability and a broad pH stability. Significance and Impact of the Study: The multi‐aspect stability makes BacFDH a competitive candidate for coenzyme regeneration in practical applications of chiral chemicals and pharmaceuticals synthesis with a relatively low cost, especially for the catalysis performed in extreme pH conditions and organic solvents.     

广谱抗真菌转基因水稻植株化学成分与结构动态变化

【背景】种植广谱抗真菌水稻可能会带来一定的环境生物安全问题,对其植株的化学成分进行实质等同性分析是转基因水稻安全性评价的重要内容之一。【方法】以表达广谱抗真菌蛋白转基因水稻转品1和转品8及其相应非转基因水稻七丝软粘的秸秆为研究材料,采用化学法和扫描电镜技术分析外源基因的导入对水稻秸秆化学成分以及组织显微结构的影响。【结果】（1）在整个生长发育过程中,广谱抗真菌转基因水稻转品1和转品8与其非转基因水稻七丝软粘叶片、叶鞘和茎的纤维素、半纤维素、木质素以及粗蛋白含量的变化趋势基本一致,且品种间化学成分的含量不存在显著差异。（2）广谱抗真菌转基因水稻叶片表皮的硅质瘤状结构以及气孔的形状和致密程度与其非转基因水稻七丝软粘相似;茎壁、厚壁组织、薄壁组织以及大小维管束的形态和分布情况未发生明显变化。【结论与意义】表达广谱抗真菌蛋白转基因水稻秸秆的化学成分和组织显微结构与非转基因水稻基本一致。这为广谱抗真菌转基因水稻的环境安全性评估提供了依据。     

蚕豆萎蔫病毒2号分离物侵染对蚕豆叶片光合活性和叶绿体超微结构的影响

研究了受蚕豆萎蔫病毒2号（Broad bean wilt virus 2,BBWV2）中国分离物B935和欧洲分离物PV131侵染的蚕豆（Vicica faba）叶片光合特性、叶绿素荧光诱导动力学参数和叶绿体超微结构变化。感病蚕豆叶绿素含量减少,叶绿素a／b比逐步降低;光合气体交换参数Pn值和Gs值降低,Ci值升高;叶绿素荧光诱导动力学参数Fv/Fm、FV＇/Fm＇、ΦPSII、qP值均有不同程度降低,NPQ值升高;光合器结构遭到不同程度的破坏,B935侵染后叶绿体发育不良,片层结构疏松,PVl31侵染后叶绿体肿胀变圆,片层结构疏松瓦解。与B935相比,PV131侵染对以上各参数的变化有更大影响,且对叶绿体的破坏更为严重。实验结果表明BBWV2不同分离物对光系统II（PSII）的抑制作用与光合器受损程度相关。     

Role of extrafloral nectaries of Vicia faba in attraction of ants and herbivore exclusion by ants

We directly evaluated the role of extrafloral nectaries (EFN) in ant attraction and herbivore exclusion by experimental removal of EFN in the laboratory. When EFN of Vicia faba Linnaeus (Leguminosae) were artificially removed, the number of workers of Tetramorium tsushimae Emery (Hymenoptera: Formicidae) visiting the plant decreased, and the efficiency of herbivore exclusion by ants also decreased. Herbivore exclusion by ants was mostly ineffective on a plant when less than four workers visited the plant, but when more than four workers visited, the time a herbivore resided on the plant decreased rapidly with increasing numbers of visiting ants. Therefore, the efficiency of herbivore exclusion from a plant is determined by the number of ants visiting, and EFN play an important role in ant attraction.     

都江堰地区三种壳斗科植物的种子库及其影响因素研究

于2000年9月～12月,在都江堰地区对原生林和次生林中3种优势壳斗科(Fagaceae)植物的种子雨和土壤种子库进行了研究,并提出基于种子雨和土壤种子库测定的种子虫蛀率、种子存活率、脊椎动物捕食率和种子发霉率的估计方法.结果表明①种子雨持续时间较长,3种壳斗科植物种子雨的高峰期在原生林和次生林中略有差异;②3种壳斗科植物的种子产量很低,种子雨散落的平均密度不大.在原生林,栓皮栎(Quercu.svariabilis)、抱树(Q serrata)和栲树(Castanopsis fargesu)种子下落的平均密度分别为2 3±3.85个/n2,6.5±17.43个/m2和1.9±5.21个/m2;而在次生林则分别为2.4±3 47个/m2,6.5±13.55个/m2和0 3±1.35个/m2;③土壤种子库中,栓皮栎在原生林中没有存留完好的种子,而在次生林的落叶层中存留有少量完好的种子(0 15±0.37个/m2); 树在原生林和次生林中都存留有少量完好的种子(分别为0.20±0.70个/m2和0.10±0.31个/m2)和少量萌发种子(分别为0.50±1.82个/m2和0.20±0 89个/m2);但在土壤中未发现有栲树的种子.绝大部分的种子存留在落叶层,而存留在0～2 cm和2～10 cm土层中的种子极少;④定量测定了发霉、虫蛀和脊椎动物捕食对2种壳斗科植物种子命运的影响,发现脊椎动物捕食是影响种子库的主要因子;虫蛀率虽增加种子的发霉率,但同时也减少脊椎动物捕食率;种子较大的栓皮栎种子的存活率低于种子较小的树种子的存活率.