MicroRNA-143 (miR-143) regulates cancer glycolysis via targeting hexokinase 2 gene

High glycolysis, well known as "Warburg effect," is frequently observed in a variety of cancers. Whether the deregulation of miRNAs contributes to the Warburg effect remains largely unknown. Because miRNA regulates gene expression at both mRNA and protein levels, we constructed a gene functional association network, which allows us to detect the gene activity instead of gene expression, to integratively analyze the microarray data for gene expression and miRNA expression profiling and identify glycolysis-related gene-miRNA pairs deregulated in cancer. Hexokinase 2 (HK2), coding for the first rate-limiting enzyme of glycolysis, is among the top list of genes predicted and potentially regulated by multiple miRNAs including miR-143. Interestingly, miR-143 expression was inversely associated with HK2 protein level but not mRNA level in human lung cancer samples. miR-143, down-regulated by mammalian target of rapamycin activation, reduces glucose metabolism and inhibits cancer cell proliferation and tumor formation through targeting HK2. Collectively, we have not only established a novel methodology for gene-miRNA pair prediction but also identified miR-143 as an essential regulator of cancer glycolysis via targeting HK2.     

Water quality check: macrophages setting the standards

In a recent study published in Cell,Chikina et al.uncovered a new mechanism by which colonic macrophages perform quality check of fluids absorbed by colonic epi...     

鸡贫血病毒SJ1株DNA的分子克隆

通过ＰＣＲ方法扩增,用ｐＵＣ１１９和ｐＢｌｕｅｓｃｒｉｐｔＳＫ质粒载体分段克隆了山东省分离的ＳＪ１株的全病毒ＤＮＡ。限制性内切酶酶切分析结果显示其与国际标准株的酶谱相似     

OLFACTORY RESPONSES OF LYSIPHLEBIA JAPONICA TO VOLATILE CHEMICALS AND FRESH LEAVES OF THE HOST PLANTS OF COTTON APHIDS IN OLFACTOMETER

Abstract The behavioral responses of the female adult parasitoids Lysiphlebia japonica to plant volatile chemicals, host plants and cotton aphids were tested in a four arm air flow olfactometer. The results indicated that the female parasitoids were strongly attracted by the odors from cotton aphids and their host plants. Damaged cotton leaves were more attractive than intact ones. Among the four olfactory stimuli from the plant volatile chemicals dissolved in liquid paraffin oil at the concentration of 0.01 (volume fraction), the female parasitoids only positively responded to benzaldehyde, but did not show any preference to β-caryophyllene and β-pinene. Although heptanol elicited the highest EAC response of the parasitoids, the behavioral test showed that it repelled the parasitoids, and β-pinene shared the same feature with heptanol at the concentration of 1 (volume fraction). Our results also showed that the female parasitoids only preferred the cotton leaf from which the mummified aphids were collected, and did not express any interest to the three plants of melon family in the olfactometer, The possible mechanisms are discussed.     

Regulation of tissue-type plasminogen activator and plasminogen activator inhibitor type-1 in cultured rat Sertoli and Leydig cells

New data are provided to show that (i) rat Sertoli cells produce two types of plasminogen activators, tissue type (tPA) and urokinase type (uPA), and a plasminogen activator inhibitor type-1 (PAI-1); (ii) both tPA (but not uPA) and PAI-1 secretion in the culture are modified by FSH, forskolin, dbcAMP, GnRH, PMA and growth factors (EGF and FGF), but not by hCG and androstenedione (△4); (iii) in vitro secretion of tPA and PA-PAI-1 complexes of Sertoli cells are greatly enhanced by presence of Leydig cells which produce negligible tPA but measurable PAI-1 activity;(iv) combination culture of Sertoli and Leydig cells remarkably increases FSH-induced PAI-1 activity and decreases hCG- and forskolin-induced inhibitor activity as compared with that of two cell types cultured alone. These data suggest that rat Sertoli cells, similar to ovarian granulosa cells, are capable of secreting both tPA and uPA, as well as PAI-1. The interaction of Sertoli cells and Leydig cells is essential for the cells to response to     

下延叉蕨和芽胞叉蕨配子体发育的研究

利用光学显微镜详细观察了叉蕨属(Tectaria)下延叉蕨(Tectaria decurrens)和芽胞叉蕨(T.fauriei)的配子体发育过程,记录了配子体各发育阶段的特征。结果表明:(1)下延叉蕨和芽胞叉蕨的孢子均为单裂缝,具周壁,由周壁形成纹饰,孢子极面观椭圆形,赤道面观豆形或肾形。(2)孢子萌发方式为向心型。(3)原叶体发育方式为三叉蕨型。(4)成熟原叶体心脏形,两翼向斜上方扩展。(5)均具单细胞和多细胞毛状体,在丝状体或片状体阶段出现。研究认为,从配子体发育角度看,叉蕨属是较进化的陆生真蕨类;毛状体的类型、位置和出现时间等特征在叉蕨属种间存在差异,可作为该属种间分类的特征。     

A network-based gene-weighting approach for pathway analysis

Classical algorithms aiming at identifying biological pathways significantly related to studying conditions frequently reduced pathways to gene sets, with an obvious ignorance of the constitutive non-equivalence of various genes within a defined pathway. We here designed a network-based method to determine such non-equivalence in terms of gene weights. The gene weights determined are biologically consistent and robust to network perturbations. By integrating the gene weights into the classical gene set analysis, with a subsequent correction for the "over-counting" bias associated with multi-subunit proteins, we have developed a novel gene-weighed pathway analysis approach, as implemented in an R package called "Gene Associaqtion Network-based Pathway Analysis" (GANPA). Through analysis of several microarray datasets, including the p53 dataset, asthma dataset and three breast cancer datasets, we demonstrated that our approach is biologically reliable and reproducible, and therefore helpful for microarray data interpretation and hypothesis generation.