激光在国外兽医领域应用及基础研究进展

本文主要就激光在国外兽医领域的激光内窥镜外科、肿瘤外科、眼外科、小动物外科以及激光动力学治疗等方面的应用及基础理论方面的研究进展进行综述。     

AREL1 resists the apoptosis induced by TGF-β by inhibiting SMAC in vascular endothelial cells

Abnormal apoptosis of vascular endothelial cells is an important feature of arteriosclerosis (AS). Here, we induced apoptosis in human umbilical vein endothelial cells (HUVECs) using transforming growth factor-β (TGF-β), and investigated the role of antiapoptotic E3 ubiquitin ligase (AREL1) in the apoptosis of vascular endothelial cells. We proved that AREL1 is downregulated in TGF-β treated HUVECs. The overexpression of AREL1 inhibits the activation of Caspase-3 and Caspase-9 and attenuates cell apoptosis induced by TGF-β. According to the result of coimmunoprecipitation, AREL1 interacts with the proapoptotic proteins the second mitochondria-derived activator of caspases (SMAC) in TGF-β treated HUVECs. In addition, miR-320b inhibits the expression of AREL1, and the overexpression of AREL1 attenuates the apoptosis induced by miR-320b mimics in HUVECs. In conclusion, AREL1 is downregulated by miR-320b. AREL1 overexpression inhibits TGF-β induced apoptosis through downregulating SMAC in vascular endothelial cells. Our study explores pathogenesis regulation mechanism and new biological therapeutic targets for vascular disease.     

绿色木霉组蛋白去乙酰化酶编码基因TvRpd3在木霉生物防治作用中的功能分析

【目的】本文借助基因编辑技术在具有生物防治潜力的绿色木霉(Trichoderma viride)中敲除组蛋白去乙酰化酶编码基因TvRpd3,来研究TvRpd3基因及其编码蛋白在提高木霉病原菌拮抗能力中的作用。【方法】利用融合PCR和同源重组策略构建了TvRpd3基因缺失的突变菌株,通过对峙培养、表型观察、免疫组化检测、代谢组学分析等系统比较TvRpd3基因敲除前后菌株的组蛋白乙酰化修饰水平、次级代谢产物合成、病原菌拮抗能力以及田间防治效果等。【结果】与野生型菌株相比,缺失TvRpd3基因的木霉工程菌(?TvRpd3)对多种病原菌表现出了更强的对峙抑制效果,其所产的发酵液对小麦白粉病、烟草黑胫病和番茄枯萎病的防治效果分别提高了62.27%、57.45%和70.71%。同时,敲除TvRpd3基因也显著改变了木霉工程菌所产次级代谢产物的种类和产量,抗生性物质的产量大幅提高。【结论】绿色木霉TvRpd3基因及其介导的组蛋白乙酰化修饰在提高绿色木霉生物防治中起着重要作用。     

游荡型黄河滩涂植物群落多样性及种间联结性

黄河干流流量季节性变化和小浪底“调水调沙”形成了黄河河南段特殊的游荡型滩涂生态系统,为揭示游荡型黄河滩涂(嫩滩、二滩、高滩和大堤)群落组成和种间关系及群落稳定性规律,于2015年9月至2018年11月,采用典型样方法在郑州黄河湿地自然保护区游荡型黄河滩涂开展群落学调查,利用149个草本层样方分析群落物种组成、多样性、种间联结性和群落稳定性。结果表明：(1)研究区植物共有90科289属445种,其中被子植物87科286属440种,裸子植物2科2属3种;蕨类植物仅见1属2种。(2)不同滩涂生境优势种具有显著差异,且总体狗牙根(Cynodon dactylon)、芦苇(Phragmites australis)和小蓬草(Erigeron canadensis)为优势种,国家二级保护植物野大豆(Glycine soja)呈斑块聚集分布,且为嫩滩和二滩亚优势种。(3)大堤物种多样性各指标取值最大,嫩滩次之,二滩和高滩较小。(4)χ²检验、Jaccard指数、Pearson相关检验和Spearman秩相关检验表明,优势种种对种间联结性不强,各物种间相对独立。(5)二滩总体联结...     

毛乌素沙地油蒿叶性状对光能利用效率动态的影响

目前对于荒漠灌木光能利用效率（LUE）的季节变异及其调控因素,尤其是其生物调控因素的认识非常有限,导致了荒漠生态系统生产力模型的不确定性。拟验证假设：长期干旱环境下,典型荒漠灌木油蒿光能利用效率日均值（LUE_day）的动态变化与叶片性状的季节性调整有关。试验采用Li-6400便携式光合仪定期测量了油蒿生长季叶片LUE_day的季节动态及相关叶性状指标,探究叶性状对LUE_day的影响。结果表明：LUE_day的季节波动范围为0.003-0.017 mol/mol,整体变异系数（CV）为38.75%。完全展叶期LUE_day均值相比生长季平均值降低17.37%,相比展叶期和落叶期时降低30%;8个叶性状的季节变异幅度差异较大,其中总叶绿素含量（Chl）、类胡萝卜素含量（Car）和叶氮含量（LNC）均表现出较大的季节变异性（CV ≥ 20%）,叶碳含量（LCC）和叶片相对含水量（LRWC）的变异程度最低（CV<7%）。LRWC与所有叶片化学性状（Chl、Chl a/b、Car、LNC和LCC）均存在显著相关,表明其变化与叶片的养分吸收、光合色素合成以及碳同化的运输过程密切相关;油蒿LUE_day的相对变化与LRWC、Chl a/b和LNC显著正相关,而LRWC和LNC的季节动态受空气温度（T_a）和土壤含水量（VWC）的共同调节,Chl a/b的季节波动主要由浅层土壤含水量（10 cm VWC）控制。以上研究结果强调,在未来预计极端的气候事件（如极端干旱和持续热浪事件）发生更频繁的旱地场景中,时间尺度植物叶性状对于土壤干旱和高温的适应性调整应当被充分考虑到旱地生态系统的通量建模方案中。该结果将为构建叶片尺度的光合生理模型与厘清LUE的生物调控机制提供理论依据。     

春小麦对骤旱的响应特征及其阈值分析

与缓慢发展的干旱过程不同,骤旱具有发生速度快,短期内可致害的特点。目前,关于作物骤旱致害的临界阈值及其调控机制尚不清楚。以春小麦为供试作物,通过桶栽试验,模拟研究骤旱过程中小麦受旱致害的过程特征及其控制因素。结果发现,发生骤旱时土壤含水量下降呈先快后慢的变化趋势,叶片水分和叶水势则呈先慢后快的指数变化趋势。叶片光合生理指标对土壤水分的下降存在明显的阈值响应,且不同生理指标的阈值并不完全相同,其中净光合速率与表征叶片光合能力的指标（最大羧化速率）对土壤有效含水量的响应阈值为0.4,气孔导度和蒸腾速率对土壤有效含水量的响应阈值分别为0.5和0.4。而小麦光合生理指标对叶片水分和叶水势的阈值响应并不明显。同时依据各生理指标相关和通径分析结果得出,骤旱发生时引起小麦叶片净光合速率快速降低的主导因子为非气孔因素,而并不是以往作物受旱研究中的气孔因素。本研究结果有望丰富干旱影响认知,并可为科学应对干旱提供依据。     

Cross-trait prediction accuracy of summary statistics in genome-wide association studies

In the era of big data, univariate models have widely been used as a workhorse tool for quickly producing marginal estimators; and this is true even when in a high-dimensional dense setting, in which many features are “true,” but weak signals. Genome-wide association studies (GWAS) epitomize this type of setting. Although the GWAS marginal estimator is popular, it has long been criticized for ignoring the correlation structure of genetic variants (i.e., the linkage disequilibrium [LD] pattern). In this paper, we study the effects of LD pattern on the GWAS marginal estimator and investigate whether or not additionally accounting for the LD can improve the prediction accuracy of complex traits. We consider a general high-dimensional dense setting for GWAS and study a class of ridge-type estimators, including the popular marginal estimator and the best linear unbiased prediction (BLUP) estimator as two special cases. We show that the performance of GWAS marginal estimator depends on the LD pattern through the first three moments of its eigenvalue distribution. Furthermore, we uncover that the relative performance of GWAS marginal and BLUP estimators highly depends on the ratio of GWAS sample size over the number of genetic variants. Particularly, our finding reveals that the marginal estimator can easily become near-optimal within this class when the sample size is relatively small, even though it ignores the LD pattern. On the other hand, BLUP estimator has substantially better performance than the marginal estimator as the sample size increases toward the number of genetic variants, which is typically in millions. Therefore, adjusting for the LD (such as in the BLUP) is most needed when GWAS sample size is large. We illustrate the importance of our results by using the simulated data and real GWAS.     

PCR-mediated screening and labeling of DNA from clones

A simplified and economical protocol for DNA library screening and nonradioactive labeling is described. Bacterial clones are lysed in 1% of Triton X-100 and subjected to polymerase chain reaction in the presence of digoxigenin-11-dUTP to screen and simultaneously to label the DNA inserts. Bacteriallysates are stable in storage at −20°C and can be used repeatedly for PCR-mediated labeling. In this protocol, very low concentrations of dNTP, digoxigenin-dUTP, and primers are used in combination with a reduced reaction volume. This will considerably reduce the expense of screening and labeling bacterial clones and facilitate the exchange of DNA probes among laboratories.