Temporal dynamics of soil bacterial network regulate soil resistomes

Soil bacteria are diverse and form complicated ecological networks through various microbial interactions, which play important roles in soil multi-functionality. However, the seasonal effects on the bacterial network, especially the relationship between bacterial network topological features and soil resistomes remains underexplored, which impedes our ability to unveil the mechanisms of the temporal-dynamics of antibiotic resistance genes (ARGs). Here, a field investigation was conducted across four seasons at the watershed scale. We observed significant seasonal variation in bacterial networks, with lower complexity and stability in autumn, and a wider bacterial community niche in summer. Similar to bacterial communities, the co-occurrence networks among ARGs also shift with seasonal change, particularly with respect to the topological features of the node degree, which on average was higher in summer than in the other seasons. Furthermore, the nodes with higher betweenness, stress, degree, and closeness centrality in the bacterial network showed strong relationships with the 10 major classes of ARGs. These findings highlighted the changes in the topological properties of bacterial networks that could further alter antibiotic resistance in soil. Together, our results reveal the temporal dynamics of bacterial ecological networks at the watershed scale, and provide new insights into antibiotic resistance management under environmental changes.     

Artificial nanovesicles for dsRNA delivery in spray-induced gene silencing for crop protection

Spray-induced gene silencing (SIGS) is an innovative and eco-friendly technology where topical application of pathogen gene-targeting RNAs to plant material can enable disease control. SIGS applications remain limited because of the instability of RNA, which can be rapidly degraded when exposed to various environmental conditions. Inspired by the natural mechanism of cross-kingdom RNAi through extracellular vesicle trafficking, we describe herein the use of artificial nanovesicles (AVs) for RNA encapsulation and control against the fungal pathogen, Botrytis cinerea. AVs were synthesized using three different cationic lipid formulations, DOTAP + PEG, DOTAP and DODMA, and examined for their ability to protect and deliver double stranded RNA (dsRNA). All three formulations enabled dsRNA delivery and uptake by B. cinerea. Further, encapsulating dsRNA in AVs provided strong protection from nuclease degradation and from removal by leaf washing. This improved stability led to prolonged RNAi-mediated protection against B. cinerea both on pre- and post-harvest plant material using AVs. Specifically, the AVs extended the protection duration conferred by dsRNA to 10 days on tomato and grape fruits and to 21 days on grape leaves. The results of this work demonstrate how AVs can be used as a new nanocarrier to overcome RNA instability in SIGS for crop protection.     

Rapid and reliable high-performance liquid chromatographic method for analysing human plasma serotonin, 5-hydroxyindoleacetic acid, homovanillic acid and 3,4-dihydroxyphenylacetic acid

The simultaneous measurement of homovanillic acid, 3,4-dihydroxyphenylacetic acid, serotonin and 5-hydroxyindoleacetic acid in human plasma by an ultrafiltration and microbore high-performance liquid chromatography—electrochemical detection technique is established. Conventional preparation of blood is very tedious and time-consuming, but isocratic separation of the analytes in plasma ultrafiltrates using a microbore column could be achieved within 10 min. Hence, theoretically, over 140 analyses can be performed in a working day. The detection limit (signal-to-noise ratio = 3) of this method is about 0.1–0.5 pg per injection for all analytes. The required volume of plasma samples can be less than 100 μl. Hence, blood loss is minimal, especially in repeated blood sampling. This rapid, simple and sensitive method can, therefore, be used as a routine clinical tool in the simultaneous measurement of plasma homovanillic acid, 3,4-dihydroxyphenylacetic acid, serotonin and 5-hydroxyindoleacetic acid.     

宁夏银川平原沙化土地不同人工林土壤质量评价

沙化土地土壤贫瘠、生产力低,人工植被恢复是重要的土壤改良措施。为研究宁夏银川平原沙地不同人工林栽植对土壤的影响,以银川腹部沙地银川植物园沙化土壤恢复区的2017年3月种植的文冠果(Xanthoceras sorbifolium)和欧李(Cerasus humilis)人工林地为研究对象,以邻近的长期撂荒地为对照,对土壤质量进行了研究。2020年7—8月采集土样并测定了土壤物理、化学、生物学等20个指标作为土壤质量评价的总数据集,方差分析筛选出差异显著性的9个指标作为重要数据集指标,采用主成分分析法和Norm值建立土壤质量评价指标最小数据集(MDS),利用线性和非线性两种评分方法计算土壤质量指数(SQI)。结果表明：与长期撂荒地相比,银川平原沙化土壤恢复区人工文冠果、欧李林地的土壤理化性质较好,土壤砂粒百分比减少、粉粒和黏粒百分比有所增加,pH降低;有机质、全氮、全磷、全钾等主要养分指标提高,蔗糖酶、脲酶、纤维素酶等主要生物酶活性也高于撂荒地,筛选出的研究区土壤质量评价MDS指标为土壤粉粒百分比和全磷。2种评价方法下,文冠果和欧李人工恢复林地的SQI高于撂荒地,但提高不显著(P>0...     

2000—2019年四川省植被恢复成效与影响因素

国家实施天然林资源保护工程与退耕还林等生态建设工程,为构筑长江上游生态屏障、促进长江流域经济可持续发展做出了突出贡献;评估退耕还林等生态工程实施后植被恢复成效及影响因素是促进区域植被恢复优化与生态环境改善的关键一步。基于MODIS MOD13Q1数据,应用Theil Sen斜率与Mann-Kendall趋势检验、“基线”评价方法、时空地理加权回归模型等量化不同时间尺度的植被时空变化、恢复成效和恢复机制。结果表明(1)植被覆盖状况良好,截止2019年底,四川省91%的区域植被出现增长,四川盆地东北部、四川省南部地区以及东南部乌蒙山、川西北高原地区植被覆盖较高;成都市内以及周围市区植被覆盖率较低。(2)植被恢复成效时空差异显著,占全省面积98.68%的区域植被恢复成效明显,高值区面积占比71.47%,集中于除成都平原外的四川省绝大部分区域。(3)气候变化对植被变化的影响以不显著为主,气温、降水对四川省植被恢复影响微弱,海拔和>35°坡度面积比等地理环境因子则以弱抑制作用为主。(4)在相对平稳的气候背景下,人均财政支出、耕地面积与人均GDP所代表的社会经济因素是植被恢复成效改善的重要影...     

盐和重金属复合胁迫对翅碱蓬萌发与生长的影响及调控措施

为探究Zn、Cu与盐复合胁迫对翅碱蓬(Suaeda salsa)萌发生长的影响机理及其调控措施,以翅碱蓬为研究对象,采用水培试验方法,测定Zn、Cu和盐复合胁迫条件下翅碱蓬种子发芽率、萌发速率和幼苗渗透调节物质含量等指标,分析1.5 mg/L吲哚乙酸(IAA)、100 mg/L赤霉素(GA)和0.3%硝酸钾(KNO₃)处理对Zn、Cu与盐复合胁迫条件下翅碱蓬萌发与生长的影响。结果表明：(1) Zn、Cu与高盐复合胁迫极显著降低翅碱蓬种子的发芽率,中高浓度的Zn、Cu与盐复合胁迫极显著降低翅碱蓬种子的萌发速率,Zn、Cu和盐复合胁迫对翅碱蓬种子的萌发生长影响表现为低促高抑效应,影响因子间存在明显的协同效应;(2)Zn、Cu和盐复合胁迫条件下,随着盐浓度的升高,翅碱蓬幼苗体内过氧化氢酶(CAT)、过氧化物酶(POD)和超氧化物歧化酶(SOD)3种抗氧化酶活性呈先升高后降低的变化趋势,Zn、Cu和高盐复合胁迫使翅碱蓬幼苗体内丙二醛(MDA)含量增加近2.5倍;(3)1.5 mg/L IAA溶液浸种12 h可显著提高Zn、Cu与高盐复合胁迫条件下翅碱蓬种子的发芽率和萌发速...     

黑龙江宁安盆地穆棱组及其孢粉型组合新发现

黑龙江宁安盆地是一个具有油气勘探远景的中小型盆地,主要目的层为下白垩统。新发现了一套相当于邻区穆棱组的地层,孢粉化石十分丰富,建立了５个孢粉组合带,通过对两口石油探井生物地层的研究,建立了该舅地新的地层层序,并对穆棱组的时代和沉积环境进行了讨论。     

基于不同网格尺度福州主城区鸟类多样性与景观特征的关系研究

理解城市鸟类多样性与景观特征的关系对城市生物多样性保护和可持续发展具有重要意义。通过爬取中国观鸟记录中心网站2020年福州主城区436份观鸟报告数据计算鸟类丰富度指数(S)、Shannon-Wiener多样性指数(H)和Simpson多样性指数(D);基于谷歌地球引擎和高分辨率Worldview影像量化景观特征因子;在此基础上,采用Mann-Whitney U检验了两个网格尺度(300 m和1000 m)下S、H和D指数的差异性;运用广义线性模型探究了两个尺度下影响鸟类多样性指数的关键景观因子及其重要性。结果表明：(1)2020年研究区内共观测到242种鸟类,隶属19目59科,雀形目鸟类为优势种;数量占比从高到低依次为留鸟、冬候鸟、旅鸟和夏候鸟,分别为63.53%、25.83%、6.71%和3.93%;(2)两个尺度下鸟类多样性指数差异明显,1000 m尺度下S和H指数均显著高于300 m尺度(0.05相似文献   

来源于嗜热氢化杆菌的新型对苯二甲酸双(羟乙)酯水解酶的表达纯化与酶学性质

石化来源的聚对苯二甲酸乙二酯(polyethylene terephthalate,PET)被广泛用于矿泉水瓶、食品包装和纺织品等领域,因其在自然界中不易分解,大量使用后的PET废弃物造成了严重的环境污染与资源浪费。使用生物酶法对PET废弃物进行解聚,并对解聚产物进行升级循环利用是进行塑料污染治理的重要方向之一,其中关键的是PET水解酶的解聚效率。对苯二甲酸双(羟乙基)酯(bis(hydroxyethyl)terephthalate,BHET)是PET生物酶解的中间产物,其累积是限制PET水解酶催化效率的一个重要因素,BHET水解酶和PET水解酶的联用能提升PET的整体水解效率。来源于嗜热氢化杆菌(Hydrogenobacter thermophilus)的双烯内酯酶(HtBHETase)对BHET有显著水解效果,将该酶在大肠杆菌(Escherichia coli)中进行重组表达并纯化后,对其酶学性质进行了研究。结果显示,HtBHETase对短碳链的酯类如对硝基苯酚乙酸酯催化活性较高,HtBHETase以BHET为底物时的最适反应pH值和最适反应温度分别为5.0和55℃;该酶有较好的热稳定性,经80℃的条件处理1 h仍能保持80%以上活性,显示出了良好的热稳定性,HtBHETase有在PET塑料生物解聚中使用的潜力,本研究为推动生物酶法降解PET提供了新的参考。     

RagA和Nprl2在果蝇肠道发育中的调节作用关系

动物胃肠道是食物消化和营养吸收器官,对机体健康至关重要。果蝇与哺乳动物的肠道在细胞组成、遗传调控等方面高度相似,是研究肠道发育的良好模型。体外培养细胞中的研究发现,Nprl2通过作用于Rag GTPase,抑制雷帕霉素靶点复合物1(target of rapamycin complex 1,TORC1)的活性,参与细胞代谢的调节。前期报道nprl2突变果蝇具有前胃增大、消化能力降低等肠道衰老相关表型。但对于Nprl2是否通过Rag GTPase调控肠道发育等方面尚不清楚。为了探究Rag GTPase在Nprl2调控果蝇肠道发育中的作用,本研究利用遗传杂交结合免疫荧光等方法对RagA敲减和nprl2突变果蝇的肠道形态、肠道细胞组成等方面进行研究。发现单独敲减RagA可以引起肠变粗、前胃增大等表型,敲减RagA能挽救nprl2突变体中肠道变细、分泌型细胞减少的表型,但并不能挽救nprl2突变体中前胃增大的表型。以上结果表明,RagA在肠道发育中发挥重要作用,Nprl2通过作用于Rag GTPase调节肠道细胞分化和肠道形态,但Nprl2对前胃发育和肠道的消化功能的调节可能通过不依赖于Rag GTPase的机制实现。