Complete genome sequence of Paenibacillus sp. strain JDR-2

Paenibacillus sp. strain JDR-2, an aggressively xylanolytic bacterium isolated from sweetgum (Liquidambar styraciflua) wood, is able to efficiently depolymerize, assimilate and metabolize 4-O-methylglucuronoxylan, the predominant structural component of hardwood hemicelluloses. A basis for this capability was first supported by the identification of genes and characterization of encoded enzymes and has been further defined by the sequencing and annotation of the complete genome, which we describe. In addition to genes implicated in the utilization of β-1,4-xylan, genes have also been identified for the utilization of other hemicellulosic polysaccharides. The genome of Paenibacillus sp. JDR-2 contains 7,184,930 bp in a single replicon with 6,288 protein-coding and 122 RNA genes. Uniquely prominent are 874 genes encoding proteins involved in carbohydrate transport and metabolism. The prevalence and organization of these genes support a metabolic potential for bioprocessing of hemicellulose fractions derived from lignocellulosic resources.     

HGF-mediated inhibition of oxidative stress by 8-nitro-cGMP in high glucose-treated rat mesangial cells

Abstract Hepatocyte growth factor (HGF) is a potential therapeutic agent for diabetic nephropathy. The mechanisms for the renoprotective effect of HGF have been studied extensively, but antioxidant signalling of HGF in diabetic nephropathy is minimally understood. Our observations indicated that a nitrated guanine nucleotide, 8-nitroguanosine 3'5'-cyclic monophosphate (8-nitro-cGMP) diminished in high glucose (HG)-treated rat mesangial cells (RMC). However, HGF obviously lifted intracellular 8-nitro-cGMP level, which was accompanied by remarkably suppressed oxidative stress as evidenced by decreased reactive oxygen species and malondialdehyde levels and elevated glutathione level. Inhibitor of soluble guanylyl cyclase (sGC) NS-2028 and inhibitor of nitric oxide synthase (NOS) l-NMMA could block increased 8-nitro-cGMP level and repress oxidative stress by HGF. Accordingly, these two inhibitors abrogated HGF-induced nuclear accumulation of NF-E2 related factor 2 (Nrf2) and up-regulation of Nrf2 downstream glutamate-cysteine ligase catalytic subunit (GCLC) expression. In conclusion, HGF ameliorated HG-mediated oxidative stress in RMC at least in part by enhancing nitric oxide and subsequent 8-nitro-cGMP production.     

10种冬青属植物遗传多样性RAPD和AFLPs分析

采用RAPD和AFLP技术,对10种冬青属植物基因组进行DNA片段扩增,以研究该属种间遗传多样性.结果表明:在RAPD分析中,通过对100种10个碱基随机引物的筛选,发现11种引物能得到多态性较高扩增产物,11种引物共扩增出301条多态性条带,多态率为98.63%.在AFLP分析中,3对选择性引物组合均扩增出了丰富的多态性片段.利用RAPD和AFLP技术分析,结果按UPGMA类平均法进行聚类,聚类结果显示冬青和代茶冬青,木姜冬青和浙江冬青以及光枝刺缘冬青与毛枝三花冬青之间的亲缘关系最近.     

应用RMAPD分子标记技术研究兰属植物间的亲缘关系(简报)

兰属是兰科兰族萼足兰亚族的一个属。全世界约有兰属植物70种,主要分布于亚洲热带与亚热带地区,向南到澳大利亚北部。根据Du Puv＆Cribb分类系统,我国有49种兰属植物和一些变种,产于秦岭以南各省。我国兰花的市场交易额巨大。这是由于兰属植物不仅具较高的观赏价值。还具重要的药用价值。     

双氯灭痛胶浆对重症急性胰腺炎大鼠的治疗作用机制

目的:研究双氯灭痛胶浆对大鼠重症急性胰腺炎(SAP)的治疗作用及机制探讨.方法:将大鼠随机分成双氯灭痛胶浆治疗组(Ds)、重症急性胰腺炎组(SAP)和正常对照组(N),术后分别于12、24和36h处死,观察血清淀粉酶、SOD、CAT、NO、丙二醛(MDA)、核因子κB(NF-κB)、及胰腺大体病理及光镜下病理变化.结果:治疗组的淀粉酶、NF-κB、NO、MDA、胰腺组织的Hughes评分均明显降低、SOD、CAT、明显升高(P＜0.05).结论:双氯灭痛胶浆对大鼠SAP有治疗作用,其作用机制可能与抑制NF-κB等前致炎物质的释放,清除自由基和抗脂质过氧化反应,抑制胰腺组织中的中性粒细胞的浸润及其活化程度有关.     

抗HBcAg人源性单链抗体细胞内表达及其抗病毒复制的实验研究

应用人源性抗HBcAg单链抗体细胞内表达技术,探讨抗HBV复制基因治疗的应用价值.应用噬菌体展示和基因重组技术,从HBV感染的外周血淋巴细胞克隆了人源性抗HBcAg单链抗体,并重组至逆转录病毒载体.以人肝癌细胞smmc-7721和PLC/PRF/5为靶细胞进行基因共转染,分别测定实验组细胞上清中的HBsAg和HBeAg,与对照组做比较,观察抗HBcAg单链抗体细胞内表达的抗病毒治疗作用.结果显示,在急性HBV感染的细胞株中,抑制病毒复制效率为49%～61%,在慢性病毒感染细胞,抑制率为41%～54%.实验结果表明,应用单链抗体细胞内表达技术,在抗病毒治疗研究中具有潜在的应用价值.应对HBV的4个开放阅读框架编码产物进行全面的对比研究,以发现抑制效率高、实用价值大的靶基因.     

中国红豆杉紫杉烯合酶cDNA的分离、表达和鉴定

紫杉烯合酶是一种二萜环化酶,催化牛儿基牛儿基焦磷酸形成紫杉醇生物合成过程中的中间体紫杉烯.利用PCR扩增同源探针筛选cDNA文库,克隆了一个编码中国红豆杉(Taxus chinensis (Pilg.) Rehd.)紫杉烯合酶3′端的2 151 bp的cDNA片段,也通过PCR扩增得到了该基因5′端的611 bp的cDNA片段,将这两个cDNA片段拼接在一起,得到长2 712 bp的cDNA片段,具有一个2 586个碱基的开放阅读框架(ORF),编码包括质体转移肽在内的共862个氨基酸残基;该酶与太平洋红豆杉紫杉烯合酶有97%的同源性(identity),与其他植物萜类环化酶也有较高的同源性.利用融合表达载体pET-32a在大肠杆菌BL21trxB中表达,所表达的融合蛋白以包含体形式存在.包含体经过变性、复性和再折叠,利用His残基亲和凝胶柱层析得到融合的紫杉烯合酶.用毛细管气相色谱-质谱联用对酶促反应产物进行分析,结果表明,融合的紫杉烯合酶能催化产生4(5),11(12)-紫杉烯.     

Coupling of Graphene Plasmonics Modes Induced by Near-Field Perturbation at Terahertz Frequencies

Plasmonics - The coupling between graphene surface plasmonic (GSP) modes and evanescent wave modes induced by near-field perturbation is investigated systematically in the grating-spacer-graphene...