Structure of the full-length enzyme I of the phosphoenolpyruvate-dependent sugar phosphotransferase system

Enzyme I (EI) is the phosphoenolpyruvate (PEP)-protein phosphotransferase at the entry point of the PEP-dependent sugar phosphotransferase system, which catalyzes carbohydrate uptake into bacterial cells. In the first step of this pathway EI phosphorylates the heat-stable phospho carrier protein at His-15 using PEP as a phosphoryl donor in a reaction that requires EI dimerization and autophosphorylation at His-190. The structure of the full-length protein from Staphylococcus carnosus at 2.5A reveals an extensive interaction surface between two molecules in adjacent asymmetric units. Structural comparison with related domains indicates that this surface represents the biochemically relevant contact area of dimeric EI. Each monomer has an extended configuration with the phosphohistidine and heat-stable phospho carrier protein-binding domains clearly separated from the C-terminal dimerization and PEP-binding region. The large distance of more than 35A between the active site His-190 and the PEP binding site suggests that large conformational changes must occur during the process of autophosphorylation, as has been proposed for the structurally related enzyme pyruvate phosphate dikinase. Our structure for the first time offers a framework to analyze a large amount of research in the context of the full-length model.     

CK2-dependent C-terminal phosphorylation at T300 directs the nuclear transport of TSPY protein

TSPY (testis-specific protein, Y-encoded) is a member of the greater SET/NAP family of molecules with various functions, e.g., in chromatin remodeling, regulation of gene expression, and has been implicated to play a role in the malignant development of gonadoblastoma, testicular and prostate cancer. Here we demonstrate that the C-terminus has a functional role for the nucleo-cytoplasmatic shuttling of the TSPY protein. Using various combinations of in vitro mutagenesis and enhanced green fluorescent protein reporter gene-expression experiments we were able to show that while the deletion of C-terminus leads to a decreased stability and enhanced degradation of the protein, the selective mutation of a C-terminal CK2 phosphorylation site (T300) prevents the TSPY protein from entering the nucleus. We conclude that phosphorylation of the (T300) residue is a necessary and functional prerequisite for TSPY's transport into the nucleus reminding of comparable data from a related Drosophila molecule, NAP1.     

Interaction of magnetite-based receptors in the beak with the visual system underlying 'fixed direction' responses in birds

Background

European robins, Erithacus rubecula, show two types of directional responses to the magnetic field: (1) compass orientation that is based on radical pair processes and lateralized in favor of the right eye and (2) so-called 'fixed direction' responses that originate in the magnetite-based receptors in the upper beak. Both responses are light-dependent. Lateralization of the 'fixed direction' responses would suggest an interaction between the two magnetoreception systems.

Results

Robins were tested with either the right or the left eye covered or with both eyes uncovered for their orientation under different light conditions. With 502 nm turquoise light, the birds showed normal compass orientation, whereas they displayed an easterly 'fixed direction' response under a combination of 502 nm turquoise with 590 nm yellow light. Monocularly right-eyed birds with their left eye covered were oriented just as they were binocularly as controls: under turquoise in their northerly migratory direction, under turquoise-and-yellow towards east. The response of monocularly left-eyed birds differed: under turquoise light, they were disoriented, reflecting a lateralization of the magnetic compass system in favor of the right eye, whereas they continued to head eastward under turquoise-and-yellow light.

Conclusion

'Fixed direction' responses are not lateralized. Hence the interactions between the magnetite-receptors in the beak and the visual system do not seem to involve the magnetoreception system based on radical pair processes, but rather other, non-lateralized components of the visual system.     

Single and multiple dose pharmacokinetics of maritime pine bark extract (Pycnogenol) after oral administration to healthy volunteers

Background

Since plant extracts are increasingly used as phytotherapeutics or dietary supplements information on bioavailability, bioefficacy and safety are warranted. We elucidated the plasma kinetics of genuine extract components and metabolites after single and multiple ingestion of the standardized maritime pine bark extract Pycnogenol (USP quality) by human volunteers.

Methods

Eleven volunteers received a single dose of 300 mg pine bark extract, five volunteers ingested 200 mg daily for five days to reach steady state concentrations. Plasma samples were obtained before and at defined time points after intake of the extract. Samples were analyzed by HPLC with ion-pair reagents and simultaneous UV and electrochemical detection.

Results

We quantified total plasma concentrations of catechin, caffeic acid, ferulic acid, taxifolin and the metabolite M1 (δ-(3,4-dihydroxy-phenyl)-γ-valerolactone). Additionally, we describe plasma time courses and steady state appearance of ten so far unknown compounds, U1 to U10. After single ingestion, compounds derived from the extract were rapidly absorbed and the majority of them were detectable over whole experimental period of 14 h. The analysis of steady state plasma samples revealed significant phase II metabolism.

Conclusion

We present the first systematic pharmacokinetic analysis of compounds derived from maritime pine bark extract. Beyond the known constituents and metabolites we uncovered the plasma time courses of ten unknown compounds. In concert with our previous detection of anti-inflammatory bioefficacy of these plasma samples ex vivo we suggest that constituents and metabolites of Pycnogenol bear potential for disclosure of novel active principles.     

Das Orientierungssystem der V?gel II. Heimfinden und Navigation

Zusammenfassung Die Analyse des Navigationssystems der Vögel bezieht sich meist auf Versuche mit Brieftauben. Kramers Karte-Kompaß-Prinzip geht davon aus, daß die Heimrichtung zunächst als Kompaßkurs bestimmt wird. Dies wurde durch zahlreiche Zeitumstimmungsversuche bestätigt. Damit erscheinen nur zwei Navigationsstrategien möglich: (1) Benutzen von Weginformation, die auf einem Richtungsreferenzsystem beruht, und (2) Benutzen von Ortsinformation, deren Richtungsbeziehung zum Ziel bekannt ist.Junge Tauben, denen während der Verfrachtung der Zugang zu magnetischer Information verwehrt worden war, flogen ungerichtet ab. Dies spricht für eine Navigationsstrategie, bei der die Richtung des Hinwegs mit dem Magnetkompaß gemessen wird. Diese Art von Wegintegration stellt aber nur eine erste Strategie sehr junger, unerfahrener Tauben dar; sobald wie möglich benutzen die Tauben Ortsinformation, denn diese erlaubt Nachbestimmung des Heimkurses und damit das Korrigieren von Fehlern.Navigation anhand von Ortsinformation bedeutet, daß Vögel den Heimkurs aufgrund von Faktoren am Auflaßort bestimmen. Die modernen Vorstellungen berücksichtigen die zentrale Rolle eines äußeren Referenzsystems und gehen von einer Navigationskarte aus, die einer kompaßmäßig ausgerichteten mentalen Repräsentation des Verlaufs der Navigationsfaktoren entspricht. Der Heimkurs wird aus den Unterschieden zwischen den Werten am Auflaßort und denen am Heimatort abgeleitet. Da es sich bei den Navigationsfaktoren um Gradienten handelt, können die Vögel deren Verlauf extrapolieren und ihren Heimkurs auch in unbekanntem Gelände bestimmen. Unregelmäßigkeiten im Gradientenverlauf führen zu Abweichungen von der Heimrichtung, sogenannten Ortsmißweisungen. In der Nähe des Heimatorts wird die Navigationskarte durch eine entsprechende Mosaik-Karte von Landmarken ergänzt.Beide Karten werden durch Lernvorgänge erstellt. Junge Tauben verschaffen sich die notwendige Information auf spontanen Flügen, indem sie Information über den zurückgelegten Weg mit Ortsinformation verknüpfen und gemeinsam in den Karten abspeichern. Bei Tauben wird die Navigationskarte etwa im dritten Lebensmonat funktionstüchtig, aber sie wird auch später noch ständig erweitert und verbessert. Ihre Größe hängt von der Erfahrung der Vögel ab. Die Karte enthält offenbar Entfernungsangaben und erlaubt freie Flüge zwischen beliebigen Zielen. In einigen Punkten entspricht sie der in der psychologischen Literatur diskutierten kognitiven Karte.Das Navigationssystem der Vögel ist dadurch gekennzeichnet, daß sie sich mit Hilfe eines einfachen angeborenen Mechanismus, des Magnetkompaß, viele andere Faktoren durch Lernvorgänge nutzbar machen und diese in komplexe Mechanismen wie die Karten integrieren.

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The orientation system of birds — II. Homing and navigation

Summary The analysis of the navigational system of birds is largely based on experiments with displaced homing pigeons. Kramer's map-and-compass model assumes that the home direction is first established as a compass course. This is confirmed by numerous clock-shift experiments. Consequently, only two types of navigational strategy appear possible: (1) the use of route-specific information based on an external reference or (2) the use of site-specific information whose directional relationship is familiar to the birds.The use of route-specific information is indicated by the finding that young birds deprived of magnetic information during displacement were disoriented, whereas birds receiving the same treatment at the release site were not. This suggests that birds navigate by recording the direction of the outward journey with their magnetic compass, determining the home course by reversing it. This strategy of path integration with the help of an external reference, however, is used only by very young, inexperienced pigeons during an early phase in the development of the navigational system. As soon as birds become more experienced and are able to use site-specific information, they give up route-specific information in favor of the former. The reasons for this change in strategy lie in the fact that using site-specific information enables birds to redetermine their home course as often as necessary, thus allowing the correction of initial mistakes.Site-specific information means that birds can derive their home course from factors perceived at the release site. The present models on navigation acknowledge the crucial role of an external reference system by proposing the navigational map to be a directionally oriented mental representation of the spatial distribution of at least two navigational factors, which are assumed to be environmental gradients. The birds determine their home course by comparing the local values of these factors with the remembered home values. Gradients can be extrapolated beyond the range of direct experience, which explains the birds' ability to home from distant, unfamiliar sites. Deviations from the true home direction, so-called release site biases, as frequently observed in pigeons and other bird species, may be attributed to unforeseen irregularities in the distribution of the navigational factors, which cause birds to misinterpret their position. Near home, the navigational or grid map is supplemented by the mosaic map, which is supposed to be a directionally oriented mental representation of the distribution of familiar landmarks.Both maps are based on experience. Young birds obtain the relevant information during spontaneous flights by combining information on the route travelled with information on the location of prominent landmarks and the direction of environmental gradients. In pigeons, the maps become functional during the third month of life. They are continuously enlarged and updated also in later years. The total size of the navigational map appears to depend on the spatial range of the birds' experience. The maps seem to include information on distance; they are not restricted to homing, but allow free movements between arbitrary goals. In several respects, the model of the avian navigational map is similar to the concept of the cognitive map discussed in psychological literature, the main differences being the larger distances involved, the representation of continuous environmental gradients instead of separate entities, and the essential role of an external reference.The navigational system of birds is thus characterized as utilizing a wide variety of environmental cues. Learning processes, which are based on a simple, innate mechanism, the magnetic compass, integrate these cues and form complex, experience-based mechanisms, such as the maps.

     

Identification of a novel mutation in WFS1 in a family affected by low-frequency hearing impairment

Previously we confirmed linkage of autosomal dominantly inherited low-frequency sensorineural hearing impairment (LFSNHI) in a German family to the genetic locus DFNA6/DFNA14 on chromosome 4p16.3 close to the markers D4S432 and D4S431. Analysis of data from the Human Genome Project, showed that WFS1 is located in this region. Mutations in WFS1 are known to be responsible for Wolfram syndrome (DIDMOAD, MIM #606201), which follows an autosomal recessive trait. Studies in low-frequency hearing loss families showed that mutations in WFS1 were responsible for the phenotype. In all affected family members analysed, we detected a missense mutation in WFS1 (K705N) and therefore confirm the finding that the majority of mutations responsible for LFSNHI are missense mutations which localise to the C-terminal domain of the protein.     

CD4+ T cell-associated pathophysiology critically depends on CD18 gene dose effects in a murine model of psoriasis

In a CD18 hypomorphic polygenic PL/J mouse model, the severe reduction of CD18 (beta(2) integrin) to 2-16% of wild-type levels leads to the development of a psoriasiform skin disease. In this study, we analyzed the influence of reduced CD18 gene expression on T cell function, and its contribution to the pathogenesis of this disease. Both CD4(+) and CD8(+) T cells were significantly increased in the skin of affected CD18 hypomorphic mice. But only depletion of CD4(+) T cells, and not the removal of CD8(+) T cells, resulted in a complete clearance of the psoriasiform dermatitis. This indicates a central role of CD4(+) T cells in the pathogenesis of this disorder, further supported by the detection of several Th1-like cytokines released predominantly by CD4(+) T cells. In contrast to the CD18 hypomorphic mice, CD18 null mutants of the same strain did not develop the psoriasiform dermatitis. This is in part due to a lack of T cell emigration from dermal blood vessels, as experimental allergic contact dermatitis could be induced in CD18 hypomorphic and wild-type mice, but not in CD18 null mutants. Hence, 2-16% of CD18 gene expression is obviously sufficient for T cell emigration driving the inflammatory phenotype in CD18 hypomorphic mice. Our data suggest that the pathogenic involvement of CD4(+) T cells depends on a gene dose effect with a reduced expression of the CD18 protein in PL/J mice. This murine inflammatory skin model may also have relevance for human polygenic inflammatory diseases.     

The chloroplast protein import channel Toc75: pore properties and interaction with transit peptides

The channel properties of Toc75 (the protein import pore of the outer chloroplastic membrane) were further characterized by electrophysiological measurements in planar lipid bilayers. After improvement of the Toc75 reconstitution procedure the voltage dependence of the channel open probability resembled those observed for other beta-barrel pores. Studies concerning the pore size of the reconstituted Toc75 indicate the presence of a narrow restriction zone corresponding to the selectivity filter and a wider pore vestibule with diameters of approximately 14 A and 26 A, respectively. Interactions between Toc75 and different peptides (a genuine chloroplastic transit peptide, a synthetic peptide resembling a transit peptide, and a mitochondrial presequence) show that Toc75 itself is able to differentiate between these peptides and the recognition is based on both conformational and electrostatic interactions.