Salt-induced stabilization of apoflavodoxin at neutral pH is mediated through cation-specific effects

Electrostatic contributions to the conformational stability of apoflavodoxin were studied by measurement of the proton and salt-linked stability of this highly acidic protein with urea and temperature denaturation. Structure-based calculations of electrostatic Gibbs free energy were performed in parallel over a range of pH values and salt concentrations with an empirical continuum method. The stability of apoflavodoxin was higher near the isoelectric point (pH 4) than at neutral pH. This behavior was captured quantitatively by the structure-based calculations. In addition, the calculations showed that increasing salt concentration in the range of 0 to 500 mM stabilized the protein, which was confirmed experimentally. The effects of salts on stability were strongly dependent on cationic species: K(+), Na(+), Ca(2+), and Mg(2+) exerted similar effects, much different from the effect measured in the presence of the bulky choline cation. Thus cations bind weakly to the negatively charged surface of apoflavodoxin. The similar magnitude of the effects exerted by different cations indicates that their hydration shells are not disrupted significantly by interactions with the protein. Site-directed mutagenesis of selected residues and the analysis of truncation variants indicate that cation binding is not site-specific and that the cation-binding regions are located in the central region of the protein sequence. Three-state analysis of the thermal denaturation indicates that the equilibrium intermediate populated during thermal unfolding is competent to bind cations. The unusual increase in the stability of apoflavodoxin at neutral pH affected by salts is likely to be a common property among highly acidic proteins.     

生物被膜的形成及其电化学阻抗检测

生物被膜是细菌及其自身分泌的胞外聚合物组成的微生物群落,其形成是受多种机制共同调控的多阶段动态过程,具有较强的耐药性且难以清除,给医疗、食品等行业带来了巨大的威胁。近年来,生物被膜的相关研究领域备受关注,尤其是针对生物被膜的有效检测技术。本文在简要介绍生物被膜的特点、形成过程及群感效应对生物被膜的调控作用基础之上,总结了生物被膜常用的检测方法,重点针对电化学阻抗技术在生物被膜检测中的应用进行调研和讨论,并对基于微流控芯片的生物被膜电化学阻抗原位检测进行了综述和展望。     

急性坏死性胰腺炎大鼠胰腺外分泌细胞中hsp70基因的表达

给大鼠胆胰管内逆行注射牛磺胆酸钠制备急性坏死性胰腺炎动物模型,采用Ｎｏｒｔｈｅｒｎ杂交及免疫组织化学方法检测了ｈｓｐ７０基因在胰腺外分泌细胞中的表达。Ｎｏｒｔｈｅｒｎ杂交分析发现,术后１ｈ即出现ｈｓｐ７０ｍＲＮＡ的高表达,然后开始下降,术后８－１６ｈ恢复至对照组水平。免疫组织化学检测发现,术后１ｈ即可见明显的ＨＳＰ７０蛋白染色,２ｈ最强,然后开始减弱,一直持续至１６ｈ,仍高于对照组水平;阳性染色位于腺泡细胞顶部并呈大颗粒状,而基底部、细胞核及腺泡腔内未见阳性信号。推测急性胰腺炎时胰腺外分泌细胞高表达ｈｓｐ７０基因,可能与其参与大量合成的胰酶的转运及抑制胰酶激活等保护作用有关。     

微型离心柱法快速分离纯化神经节苷脂

神经节苷脂的分离与纯化是研究组织细胞Gls组成、含量及代谢的基本手段.但是以往的方法周期长、溶剂用量大,为此建立了一种新的微型离心柱快速分离Gls纯化法,标准Gls的回收率为97.64％,ｎ＝7,ＣＶ＜３％,HPTLC图谱显示无丢带现象.纯化样品只需十几个小时,操作简单,溶剂用量小,重复性好,为微量样品组分的研究提供了一个有效的手段.     

The Efficacy of Hyperbaric Oxygen Therapy on Middle Cerebral Artery Occlusion in Animal Studies: A Meta-Analysis

Background

Inconsistent results have been reported for hyperbaric oxygen therapy (HBO) for acute stroke. We conducted a systematic review and meta-analysis to evaluate the benefit of HBO in animal studies of middle cerebral artery occlusion (MCAO).

Methods

A systematic search of the literature published prior to September 2015 was performed using Embase, Medline (OvidSP), Web of Science and PubMed. Keywords included “hyperoxia” OR “hyperbaric oxygen” OR “HBO” AND “isch(a)emia” OR “focal cerebral ischemia” OR “stroke” OR “infarct” OR “middle cerebral artery occlusion (MCAO).” The primary endpoints were the infarct size and/or neurological outcome score evaluated after HBO treatment in MCAO. Heterogeneity was analyzed using Cochrane Library’s RevMan 5.3.5.

Results

Fifty-one studies that met the inclusion criteria were identified among the 1198 studies examined. When compared with control group data, HBO therapy resulted in infarct size reduction or improved neurological function (32% decrease in infarct size; 95% confidence interval (CI), range 28%–37%; p < 0.00001). Mortality was 18.4% in the HBO group and 26.7% in the control group (RR 0.72, 95% CI, 0.54–0.98; p = 0.03). Subgroup analysis showed that a maximal neuro-protective effect was reached when HBO was administered immediately after MCAO with an absolute atmospheric pressure (ATA) of 2.0 (50% decrease; 95% CI, 43% -57% decrease; p < 0.0001) and more than 6 hours HBO treatment (53% decrease; 95% CI, 41% -64% decrease; p = 0.0005).

Conclusions

HBO had a neuro-protective effect and improved survival in animal models of MCAO, especially in animals given more than 6 hours of HBO and when given immediately after MCAO with 2.0 ATA.     

Seasonal variations in biochemical composition during the reproductive cycle of the veined rapa whelk Rapana venosa (Valenciennes, 1846) from the northern coast of China

Seasonal variations in the biochemical composition of Rapana venosa in relation to reproductive cycle and environment on the northern coast of China were investigated from March 2012 to February 2013. The results indicated that R. venosa has an annual reproductive cycle with synchronized gonad development in both females and males. Gametogenesis was initiated in September and gametes developed slowly during the winter, followed by rapid gonad development during spring and summer. Most individuals from this study were sexually mature between May and June, and gamete release occurred mainly between May and August. The peak of spawning was found in July and the recovery of the gonad was observed between August and November. The key biochemical components including glycogen, protein and lipid were analysed in four tissues, specifically the gonad, digestive gland, mantle and foot. The declining glycogen content in the gonad, digestive gland and mantle during maturation suggested that glycogen was consumed during the development of the gonad. Lipids and protein can be stored in the digestive gland and used during the winter in a period of food shortage. The protein and lipid contents in the ovaries increased during gonad development, which suggested that the protein and lipid had been accumulated as vitellin in oocytes.     

CAF-1 is essential for Drosophila development and involved in the maintenance of epigenetic memory

DNA synthesis during S-phase and upon DNA repair is accompanied by chromatin assembly. The chromatin assembly factor CAF-1 has been biochemically well-characterized to deposit histones onto newly synthesized DNA. To gain insights into the in vivo functions of CAF-1 in Drosophila, we generated null mutants of the largest subunit of dCAF-1, dCAF-1-p180. We show that, unlike CAF-1 mutant yeast, dCAF-1-p180 mutant flies are hemizygous lethal. Removal of maternal dCAF-1-p180 activity by germline clones blocks oogenesis. Tissue-specific deletion of dCAF-1-p180 in the eye primordia disrupts eye development. In addition, reduction of dCAF-1-p180 activity suppresses gene silencing at heterochromatin and antagonizes Polycomb-mediated cell fate determination. Furthermore, heterozygous dCAF-1-p180 mutant flies display an increased sensitivity to γ-irradiation and a reduced efficiency in recombinational double strand break (DSB) repair. Our experiments also show that human hCAF-1-p150 can rescue the dCAF-1-p180 mutant flies, demonstrating a functional conservation of eukaryotic CAF-1 activities in vivo. Together, our results establish that dCAF-1-p180 is an essential gene for Drosophila development and further underscore the importance of dCAF-1 in regulating gene expression and DNA repair in vivo.     

MiR-206 suppresses the deterioration of intrahepatic cholangiocarcinoma and promotes sensitivity to chemotherapy by inhibiting interactions with stromal CAFs

Background: Intrahepatic cholangiocarcinoma (iCCA) is a highly malignant subtype of cholangiocarcinoma (CCA) with poor prognosis. In iCCA, the interplay between the stroma and tumor cells results in resistance to adjuvant chemotherapy. Increasing evidence indicates that miR-206 participates in tumor progression, but its role in iCCA is still unclear. The aim of this study was to identify dysregulated miR-206 expression in iCCA and to further explore the underlying mechanism.Methods: MiR-206 expression was proven to be downregulated in iCCA tissues by qPCR, and its correlation with clinical characteristics and prognosis was investigated. iCCA-derived cancer-associated fibroblast cells (CAFs) and normal fibroblast cells (NFs) were isolated and identified. MiR-206 was knocked in or down in CAFs and CCA cells, respectively, to explore the role of miR-206, and coculture of these treated CCAs and CAFs was conducted to explore the effects of miR-206 on their mutual promoting effects. Exosomes carrying miR-206 and an orthotopic mouse model were used to determine the inhibitory effects of miR-206 on iCCA deterioration in vivo.Results: We confirmed that miR-206 is a suppressor of iCCA. Overexpressing miR-206 in CCA cells inhibited cell proliferation, migration and invasion. When cocultured with CCA cells, NFs downregulated miR-206 expression, and NFs were susceptible to transforming into CAFs. Moreover, CAFs promoted CCA cell malignant behaviors and gemcitabine resistance. Overexpressing miR-206 in CAFs or CCA cells inhibited this mutual promoting effect. Additionally, when delivered by exosomes, miR-206 suppressed tumor deterioration. And combined with gemcitabine, this treatment resulted in a longer survival time.Conclusion: Our study explained that the interaction between CCA cells and CAFs promoted iCCA deterioration. As a suppressive factor, miR-206 inhibited aggressive characteristics and gemcitabine resistance by interfering with this mutual promoting effect. This research elucidated the molecular mechanism underlying the unfavorable chemotherapeutic response of patients with iCCA, which provided a promising target for iCCA treatment.