Determination of equilibrium constants and maximum binding capacities in complexIn vitro systems: I. The mammillary system

It is shown that in a system containingn types of mutually noninteracting binding sites, the association constants are then roots of annth order polynomial while the maximum binding capacities can be evaluated by solving a set ofn simultaneous linear equations. Thenth order polynomial and the system ofn linear equations are defined in terms of 2n intermediate coefficients, the coefficients being themselves evaluated by substituting 2n sets of appropriate experimental data into an auxiliary system of 2n linear equations. The existence and uniqueness of the solutions are established.     

Periodic oscillations in leukopoiesis models with two delays

The term leukopoiesis describes processes leading to the production and regulation of white blood cells. It is based on stem cells differentiation and may exhibit abnormalities resulting in severe diseases, such as cyclical neutropenia and leukemias. We consider a nonlinear system of two equations, describing the evolution of a stem cell population and the resulting white blood cell population. Two delays appear in this model to describe the cell cycle duration of the stem cell population and the time required to produce white blood cells. We establish sufficient conditions for the asymptotic stability of the unique nontrivial positive steady state of the model by analysing roots of a second degree exponential polynomial characteristic equation with delay-dependent coefficients. We also prove the existence of a Hopf bifurcation which leads to periodic solutions. Numerical simulations of the model with parameter values reported in the literature demonstrate that periodic oscillations (with short and long periods) agree with observations of cyclical neutropenia in patients.     

关于高阶多时滞中立型微分方程的周期解

本文研究高阶常系数线性多时滞中立型方程的周期解,得到了周期解存在的充分 必要条件,改进或推广了文［１－７］的主要结果。     

Multistationarity in mass action networks with applications to ERK activation

Ordinary Differential Equations (ODEs) are an important tool in many areas of Quantitative Biology. For many ODE systems multistationarity (i.e. the existence of at least two positive steady states) is a desired feature. In general establishing multistationarity is a difficult task as realistic biological models are large in terms of states and (unknown) parameters and in most cases poorly parameterized (because of noisy measurement data of few components, a very small number of data points and only a limited number of repetitions). For mass action networks establishing multistationarity hence is equivalent to establishing the existence of at least two positive solutions of a large polynomial system with unknown coefficients. For mass action networks with certain structural properties, expressed in terms of the stoichiometric matrix and the reaction rate-exponent matrix, we present necessary and sufficient conditions for multistationarity that take the form of linear inequality systems. Solutions of these inequality systems define pairs of steady states and parameter values. We also present a sufficient condition to identify networks where the aforementioned conditions hold. To show the applicability of our results we analyse an ODE system that is defined by the mass action network describing the extracellular signal-regulated kinase (ERK) cascade (i.e. ERK-activation).     

Positive solutions of an elliptic system arising from a model in evolutionary ecology

We give sufficient and almost necessary conditions for the existence of positive solutions to an elliptic system satisfying various Dirichlet boundary conditions. The elliptic system consists of the steady-state equations of a parabolic system used to model the growth and spread of a particular gene and population living in a bounded region. The model takes into account the fact that the fitness of the individuals in the population may depend on the population size. Some non-existence results are also included.Research partially supported by NSF grant no. DMS-8801968     

Analysis of a mathematical model for transport of I-albumin

The hypotheses and results given are motivated by the study of the distribution of albumin in man which represents a class of delay-differential systems. The approach used is to study the behavior of the solutions of nonlinear delay-differential systems with variable coefficients under the assumptions of continuity and boundedness of coefficients. The criterions are conditions on the roots of a certain “quasi-polynomial”, i.e., a polynomial in a variable and exponential of that variable. These criterions bear a resemblance to the ones in the case of constant coefficients and retardations and are applicable to this case also. The method is based on Lyapunov type functional with appropriate properties.     

几类具有无穷时滞泛函微分方程正周期解的存在性

运用Leray-Schauder不动点定理研究具有无穷时滞的泛函微分方程的正周期解的存在性问题,获得了存在正周期解的充分条件,改进了文献[3]中的结果.     

时标上一捕食二食饵系统的周期解（英文）

研究时标上一捕食二食饵系统.运用时标上Gaines和Mawhin的连续拓扑度定理,得到了系统存在周期解的新的充分条件.其研究方法可以广泛地运用来研究微分或者差分方程的周期解存在性问题.     

Determination of the quaternary phase diagram of the water-ethylene glycol-sucrose-NaCl system and a comparison between two theoretical methods for synthetic phase diagrams

Characterization of the thermodynamic properties of multi-solute aqueous solutions is of critical importance for biological and biochemical research. For example, the phase diagrams of aqueous systems, containing salts, saccharides, and plasma membrane permeating solutes, are indispensible in the field of cryobiology and pharmacology. However, only a few ternary phase diagrams are currently available for these systems. In this study, an auto-sampler differential scanning calorimeter (DSC) was used to determine the quaternary phase diagram of the water-ethylene glycol-sucrose-NaCl system. To improve the accuracy of melting point measurement, a “mass-redemption” method was also applied for the DSC technique. Base on the analyses of these experimental data, a comparison was made between the two practical approaches to generate phase diagrams of multi-solute solutions from those of single-solute solutions: the summation of cubic polynomial melting point equations versus the use of osmotic virial equations with cross coefficients. The calculated values of the model standard deviations suggested that both methods are satisfactory for characterizing this quaternary system.     

The dynamics of production and destruction: Analytic insight into complex behavior

This paper analytically explores the properties of simple differential-difference equations that represent dynamic processes with feedback dependent on prior states of the system. Systems with pure negative and positive feedback are examined, as well as those with mixed (positive/negative) feedback characteristics. Very complex time dependent behaviors may arise from these processes. Indeed, the same mechanism may, depending on system parameters and initial conditions, produce simple, regular, repetitive patterns and completely irregular random-like fluctuations.For the differential-delay equations considered here we prove the existence of: (i) stable and unstable limit cycles, where the stable cycles may have an arbitrary number of extrema per period; and (ii) chaos, meaning the presence of infinitely many periodic solutions of different period and of infinitely many irregular and mixing solutions.     

Mathematical description of a bursting pacemaker neuron by a modification of the Hodgkin-Huxley equations.

Modifications based on experimental results reported in the literature are made to the Hodgkin-Huxley equations to describe the electrophysiological behavior of the Aplysia abdominal ganglion R15 cell. The system is then further modified to describe the effects with the application of the drug tetrodotoxin (TTX) to the cells' bathing medium. Methods of the qualitative theory of differential equations are used to determine the conditions necessary for such a system of equations to have an oscillatory solution. A model satisfying these conditions is shown to preduct many experimental observations of R15 cell behavior. Numerical solutions are obtained for differential equations satisfying the conditions of the model. These solutions are shown to have a form similar to that of the bursting which is characteristic of this cell, and to preduct many results of experiments conducted on this cell. The physiological implications of the model are discussed.     

具有无限时滞和扩散项的非自治竞争系统的正周期解(英文)

研究了一类具有无限时滞和扩散项的非自治竞争系统,利用重合度的廷拓定理,得到了该系统正周期解存在的充分性条件.     

Rotating wave solutions of the FitzHugh–Nagumo equations

This paper will treat the bifurcation and numerical simulation of rotating wave (RW) solutions of the FitzHugh-Nagumo (FHN) equations. These equations are often used as a simple mathematical model of excitable media. The dependence of the solutions on a uniformly applied current, and also on the diffusion coefficients or domain size will be studied. Ranges of applied current and/or diffusion coefficients in which RW solutions are observed will be described using bifurcation theory and continuation methods. The bifurcation of time-periodic solutions of these FHN equations without diffusion is described first. Similar methods are then used to find RW solutions on a circular ring and numerical simulations are described. These results are then extended to investigate RW solutions on annular rings of finite cross-section. Scaling arguments are used to show how the existence of solutions depends on either the diffusion coefficient or on the size of the region.     

Pursuit-evasion wave trains in prey-predator systems with diffusionally coupled delays

The Lotka-Volterra system of prey-predator equations is considered with a special type of continuous time delay. In the case of equal diffusion coefficients Hopf’s bifurcation technique is used to show the existence of travelling wave train solutions for the prey-predator system.     

Asymptotic behaviour of solutions of the diffusive Lotka-Volterra equations

A spatially discrete version of the diffusive Lotka-Volterra equations is considered. Asymptotical spatial homogeneity of solutions of the equations with equilibrium, periodic or zero flux boundary conditions is proved without regard to crowding effects. The proof does not require the assumption of equal diffusion coefficients and the restrictions on the dimension of space and on the initial data, which are necessary in the spatially continuous model.     

The geometrical analysis of a predator-prey model with two state impulses

Using successor functions and Poincaré-Bendixson theorem of impulsive differential equations, the existence of periodical solutions to a predator-prey model with two state impulses is investigated. By stability theorem of periodic solution to impulsive differential equations, the stability conditions of periodic solutions to the system are given. Some simulations are exerted to prove the results.     

The role of seasonality in the dynamics of deer tick populations

In this paper, we formulate a nonlinear system of difference equations that models the three-stage life cycle of the deer tick over four seasons. We study the effect of seasonality on the stability and oscillatory behavior of the tick population by comparing analytically the seasonal model with a non-seasonal one. The analysis of the models reveals the existence of two equilibrium points. We discuss the necessary and sufficient conditions for local asymptotic stability of the equilibria and analyze the boundedness and oscillatory behavior of the solutions. A main result of the mathematical analysis is that seasonality in the life cycle of the deer tick can have a positive effect, in the sense that it increases the stability of the system. It is also shown that for some combination of parameters within the stability region, perturbations will result in a return to the equilibrium through transient oscillations. The models are used to explore the biological consequences of parameter variations reflecting expected environmental changes.     

Chemical Reaction Systems with Toric Steady States

Mass-action chemical reaction systems are frequently used in computational biology. The corresponding polynomial dynamical systems are often large (consisting of tens or even hundreds of ordinary differential equations) and poorly parameterized (due to noisy measurement data and a small number of data points and repetitions). Therefore, it is often difficult to establish the existence of (positive) steady states or to determine whether more complicated phenomena such as multistationarity exist. If, however, the steady state ideal of the system is a binomial ideal, then we show that these questions can be answered easily. The focus of this work is on systems with this property, and we say that such systems have toric steady states. Our main result gives sufficient conditions for a chemical reaction system to have toric steady states. Furthermore, we analyze the capacity of such a system to exhibit positive steady states and multistationarity. Examples of systems with toric steady states include weakly-reversible zero-deficiency chemical reaction systems. An important application of our work concerns the networks that describe the multisite phosphorylation of a protein by a kinase/phosphatase pair in a sequential and distributive mechanism.