Structure and injuries of octocoral communities (Octocorallia: Alcyonacea) of Ecological Reserve Siboney-Juticí, Santiago de Cuba, Cuba

In the spur-and-groove reefs of the Ecological Reserve Siboney-Juticí (Southeast Cuba) octocorals are one of the predominant components of the sessile fauna. Main objectives of the present paper are characterizing the composition, structure and conservation status of the octocoral communities and assessing on the prevailing environmental conditions in the study area. For data collection, six sampling sites were located every 2-3 km ranging from 12 m to 17 m depth along the spur-and-groove reefs. In each site, 22-26 lm2 quadrants were zigzag arranged every 2 m. The density of colonies was determined per site. The severity degree and predictability of environmental conditions were inferred by using the Heterogeneity and Equitability indexes, respectively. Hydrodynamic stress and the Comparative Pollution Index were also assessed. Current affectations of the octocoral communities were also determined and classified into four main categories: mechanical damage, diseases, predation and invertebrate and macroalgae overgrowth. As a result, 25 species represented by 752 colonies were recorded and Eunicea flexuosa and Gorgonia ventalina were the most abundant. The occurrence of Eunicea succinea forma succinea constituted the first report for Eastern Cuba. Site densities ranged from 3.58 +/- 1.84 to 7.58 +/- 2.16 colonies/m2 and considered from moderate to low. The biggest densities were reported at both sides of the San Juan River mouth. Despite of the composition and structure of the octocoral communities, low to high hydrodynamic stress and low and moderate levels of contamination were inferred, it is likely that these indexes could have been overestimated due to the sensitivity of the indicator species to other factors such as sedimentation. The environmental conditions were mostly favorable and stable. In general, the number of dead colonies was low and mostly caused by the detachment of the substrate and overgrowth of Millepora alcicornis. Injuries were mainly brought about by mechanical damage, followed by coenenchyme loss, predation by Cyphoma gibbosum and macroalgae overgrowth. On the other hand, negative effects by Hermodice carunculata predation, bleaching, Red Band and Black Band Disease were not observed. Among sampled species, G. ventalina colonies were the most severely damaged within the community. As a whole, octocoral communities of spur-and-groove reefs in the Ecological Reserve Siboney-Juticí showed a good conservation status.     

The genetic identity of dinoflagellate symbionts in Caribbean octocorals

Many cnidarians (e.g., corals, octocorals, sea anemones) maintain a symbiosis with dinoflagellates (zooxanthellae). Zooxanthellae are grouped into clades, with studies focusing on scleractinian corals. We characterized zooxanthellae in 35 species of Caribbean octocorals. Most Caribbean octocoral species (88.6%) hosted clade B zooxanthellae, 8.6% hosted clade C, and one species (2.9%) hosted clades B and C. Erythropodium caribaeorum harbored clade C and a unique RFLP pattern, which, when sequenced, fell within clade C. Five octocoral species displayed no zooxanthella cladal variation with depth. Nine of the ten octocoral species sampled throughout the Caribbean exhibited no regional zooxanthella cladal differences. The exception, Briareum asbestinum, had some colonies from the Dry Tortugas exhibiting the E. caribaeorum RFLP pattern while elsewhere hosting clade B. In the Caribbean, octocorals show more symbiont specificity at the cladal level than scleractinian corals. Both octocorals and scleractinian corals, however, exhibited taxonomic affinity between zooxanthella clade and host suborder.Communicated by R.C. Carpenter     

黑河下游额济纳绿洲植物群落物种多样性的空间异质性

采用地统计学方法研究了黑河下游额济纳绿洲物种多样性的空间异质性.结果表明:Margalef丰富度指数(Ma)、Shannon多样性指数(H')、Simpson多样性指数(Ds)和Pielou均匀度指数(J')均服从正态分布,变异系数(CV)为55.8%～67.8%,均属中等变异;Ma和H'符合指数模型,Ds和J'符合球体模型;H'的空间变异程度最高,其次是Ma和J',Ds最小;在变程范围内,各物种多样性指数空间变异的结构性因子占主导地位,所占比例为81.1%～93.0%.各多样性指数沿河流方向的格局变化明显,绿洲核心区达来呼布镇(42°N,101°E)附近为显著高值区,在100°—101°E和102°—102°30'E的带状范围内呈明显的低值区,主要包括东、西戈壁及巴丹吉林沙漠腹地.     

The dual role of sclerites in a gorgonian coral: Conflicting functions of support and defence

Sclerites in the gorgonian coral Briareum asbestinum perform the dual role of skeletal support against wave action and structural defence against predators. Local populations of B. asbestinum vary along gradients of decreasing water movement and decreasing predator abundance with increasing depth, such that sclerite length increases and sclerite density decreases with depth. Based on this pattern, I explored a possible trade-off between the sclerite composition that is most resistant to tearing versus most deterrent to predatory gastropods. Feeding assays revealed that artificial foods containing longer sclerites and those containing higher volume fractions of sclerites are less palatable to the gastropod Cyphoma gibbosum. However, real colonies appear constrained, in that they do not contain both long sclerites and high volume fractions at the same time. Given a choice among real colonies, snails prefer shallow-water colonies with shorter sclerites e ven though the sclerite volume fractions are high. Although least deterrent to snails, shallow-water colonies are 56% more resistant to tearing than their deep-water counterparts. Hence, variation in sclerite composition among local populations of B. asbestinum may be maintained by opposing selection for support versus defense.     

Phenotypic plasticity or speciation? A case from a clonal marine organism

Background  

Clonal marine organisms exhibit high levels of morphological variation. Morphological differences may be a response to environmental factors but also they can be attributed to accumulated genetic differences due to disruption of gene flow among populations. In this study, we examined the extensive morphological variation (of 14 characters) in natural populations observed in the gorgonian Eunicea flexuosa, a widely distributed Caribbean octocoral. Eco-phenotypic and genetic effects were evaluated by reciprocal transplants of colonies inhabiting opposite ends of the depth gradient and analysis of population genetics of mitochondrial and nuclear genes, respectively.     

Meiofauna of the profundal zone of the northern part of Lake Ladoga as an indicator of pollution

Benthic meiofauna was sampled at 19 stations, mainly in the northern part of Lake Ladoga, from depths between 13 and 199 m and from types of environment ranging from sheltered areas near pollution sources to less polluted open areas. About 80 taxa were identified, of these 70 to the species level. The greatest numbers of species were oligochaetes (24 species) and harpacticoids (8 species). Certain quantitative ratios of meiofauna were shown to be correlated with environmental data. The species of the oligochaete families Lumbriculidae and Aeolosomatidae and the harpacticoids as a collective group, excluding Canthocamptus staphylinus, were most clearly confined to the less eutrophied environments. The oligochaete species Amphichaeta leydigii, Dero digitata and Tubifex tubifex, the resting stages of Cyclopinae, and Eucyclops serrulatus among the Eucyclopinae were most clearly concentrated in the eutrophicated or polluted environments. The groups of Naididae, Cladocera and Eucyclopinae did not have much value as indicators. Shannon diversity index correlated positively with the total phosphorus content of the water, and number of species decreased with increasing depth. In general, it seems that the pollution tolerance of the meiofauna in a very large lake such as Lake Ladoga is high, presumably due to the effective mixing of water masses.     

Long-term in situ dynamics of the fungal communities in a multi-contaminated soil are mainly driven by plants

The fungal communities of a multi-contaminated soil polluted by polycyclic aromatic hydrocarbons and heavy metals (NM) were studied within a long-term in situ experiment of natural attenuation assisted by plants. Three treatments were monitored: bare soil (NM-BS), soil planted with alfalfa and inoculated with mycorrhizal fungi (NM-Msm), and soil with spontaneous vegetation (NM-SV). The same soil after thermal desorption (TD) was planted with alfalfa and inoculated with mycorrhizal fungi (TD-Msm). Twice a year for 5?years, the fungal abundance and the community structure were evaluated by real-time PCR and temporal temperature gradient gel electrophoresis targeting 18S rRNA genes. The fungal abundance increased over time and was higher in planted than in bare NM soil and in TD than in NM soil. The Shannon diversity index (H') increased during the first 2?years with the emergence of more than 30 ribotypes, but decreased after 3?years with the selection of a few competitive species, mostly Ascomycetes. H' was higher under complex plant assemblage (NM-SV) than in the NM-BS plots but did not differ between NM and TD soils planted with alfalfa. These results indicated that even in a highly polluted soil, the plant cover was the main driver of the fungal community structure.     

Factorial correspondence analysis of oligochaeta communities according to eutrophication level

In 1976, 31 sediment cores were taken between the 50 and 310 m isobaths in Lake Geneva (Switzerland). Communities of Tubificidae and Lumbriculidae were used to characterize sampling stations. These results were analysed with factorial correspondence analysis. Differences in worm communities, due to microdistribution and seasonal variation inside location, were small compared with differences between sampling stations. Locations from a previous study classified as polluted and not polluted by chemical and biological criteria were entered into the analysis as reference stations. Distance on the factorial plots between studied and reference stations indicated their pollution level. Positions of worm species around sampling locations allowed these to be classified as indicators of pollution level. Since 1962 pollution has modified worm communities between the 150 and 310 m isobaths. Deep water stations, where oxygen is low, have a fauna similar to shallow water stations near the sewage outfall of Vidy. Tubifex tubifex is present in the most polluted conditions. Stylodrilus heringianus is an indicator of unpolluted conditions. Potamothrix vejdovskyi, P. heuscheri and P. hammoniensis can be used to indicate a gradient of increasing pollution.     

北京小型湖泊底栖无脊椎动物群落结构特征与营养状况的研究

1987年间逐月调查分析了北京6个小型湖泊底栖无脊椎动物群落结构特征。通过指示种、优势种、种类、数量、生物量、Shannon多样性指数及其与水质的关系分析,前3个湖相当于中营养湖泊,后3个湖相当于中-富营养湖泊。梨形环稜螺(Bellamya purificata)和粗腹摇蚊幼虫(Pelopia sp.)可作为北京6个小湖环境质量的指标生物,前者指示水质较好,后者指示水质较差。Shannon多样性指数值(H′)与湖水BOD、COD、TP、TN含量之间关系比较密切,用该指数并参考指示生物特征评价此类型浅水小湖营养状况是可行的。     

茅尾海营养状况及其来源研究

根据2008年茅尾海海域水质调查结果,采用营养指数法、营养状态质量指数法、有机污染指数法对海湾营养状况进行了评价,并结合2007年入海污染源调查结果,探讨了茅尾海的营养盐来源。结果表明:茅尾海受无机氮污染较重,海域处于呈富营养状态,有机污染程度属2级,表明开始受到有机污染。营养盐高值区集中在北部海域和东部海域。钦江、茅岭江等入海河流携带入海的营养盐是海域营养的主要来源,占入海污染物总量的79%以上,其次来自钦州湾外海的混合排污口。2001~2007年茅尾海DIN、DIP年均浓度分别与入海河流氮、磷营养盐入海负荷呈显著正相关,两者的相关系数分别为0.873和0.824。     

工业有机污染对小型水体沉积物真菌群落的影响分析

【背景】有机污染对水体沉积物中的微生物多样性影响极大,而目前有关污染水体沉积物中真菌多样性的研究较少。【目的】研究不同程度有机污染下水体沉积物中真菌种群的多样性特征,探究工业有机污染对真菌群落的影响。【方法】应用化学分析方法和高通量测序技术进行研究,并分析水质、沉积物成分等环境因子与沉积物真菌多样性的相关性。【结果】随着污染程度的降低,水体沉积物中真菌序列数、OTU数和Shannon多样性指数均呈上升趋势。未分类真菌、子囊菌门和担子菌门是沉积物真菌群落中的主要优势种类,主要优势属为Zopfiella、Westerdykella、Clypeosphaeria、Ilyonectria、Paracremonium、Aspergillus。真菌Shannon指数与水体溶解氧(dissolvedoxygen,DO)极显著正相关,与沉积物有机质和总磷含量显著负相关,Simpson指数与水体总氮(total nitrogen,TN)、氨氮(NH3-N)、总磷(total phosphorus,TP)显著相关。【结论】有机污染导致水体溶解氧下降和沉积物有机质增加,从而导致污染区真菌多样性显著下降。Zopfiella、Penicillium、Emericellopsis、Westerdykella、Jugulospora、Chromelosporium可能参与曝气处理区域沉积物兼氧条件下污染物的去除,Ilyonectria、Mortierella、Epicoccum可能主要参与水生生物残体分解、污染物的吸附沉降等过程。     

浙江分水江水库大型底栖动物群落结构及水质评价

2008年11月-2009年10月,在浙江桐庐分水江水库设置7个站点对大型底栖动物进行逐月调查.结果表明:调查共采集到37种底栖动物,主要由寡毛纲和摇蚊科物种组成.春、夏、秋季优势种均为霍甫水丝蚓,冬季优势种为羽摇蚊.直接收集者在物种数量、密度和生物量上均占绝对优势.群落年均密度和年均生物量分别为(488.0±48.8) ind·m-2和(1.86±0.49) g·m-2.底栖动物密度在站点间无明显差异但存在显著的季节变化,呈现春季＞夏季＞冬季＞秋季的趋势,生物量在站点、季节间均无显著差异.水温和水深是影响底栖动物时空分布的主要因子.Shannon多样性指数和Goodnight-Whitley指数不适合用于该水库的水质评价,其他指数综合显示分水江水库属于轻度污染.     

Environmental filtering and neutral processes shape octocoral community assembly in the deep sea

The ecological and evolutionary processes that interact to shape community structure are poorly studied in the largest environment on earth, the deep sea. Phylogenetic data and morphological traits of octocorals were coupled with environmental factors to test hypotheses of community assembly in the deep (250–2500 m) Gulf of Mexico. We found lineage turnover at a depth of 800–1200 m, with isidids and chrysogorgiids at deeper depths and a diversity of species from across the phylogeny occupying shallower depths. Traits, including axis type, polyp shape, and polyp retraction, differed among species occupying the shallowest (250–800 m) and deepest (1200–2500 m) depths. Results also indicated that octocoral species sort along an environmental gradient of depth. Closely related octocoral species sorted into different depth strata on the upper to middle slope, likely due to barriers imposed by water masses followed by adaptive divergence. Within any given depth zone down to 2000 m, the phylogenetic relatedness of co-existing octocorals was random, indicating that stochastic processes, such as recruitment, also shape community structure. At depths >2000 m, octocorals were more closely related than expected by chance due to the diversification of chrysogorgiids and isidids, which retain conserved traits that impart survival at deeper and/or colder depths. Polyp density, size, and inter-polyp distance were significantly correlated with depth, particularly in plexaurids and isidids, highlighting trait lability across depth and supporting that environmental gradients influence octocoral morphology. Our community phylogenetics approach indicates that both environmental filtering and neutral processes shape community assembly in the deep sea.     

Spatial variation in ciliate communities with respect to water quality in the Delhi NCR stretch of River Yamuna,India

The River Yamuna emerges from Saptarishi Kund, Yamunotri and merge with River Ganges at Allahabad, India. Anthropogenic stress has affected the water quality of the river Yamuna drastically in the stretch traversing Delhi and its satellite towns (National Capital Region, NCR). In the present study, effect of water quality on the microbial life in the River Yamuna was analyzed using ciliate communities (Protista, Ciliophora) as bio-indicators. Water samples were collected from six sampling sites chosen according to the levels of pollution along the river and water quality was analysed using standard physicochemical factors. As the river traverses Delhi NCR, water quality deteriorates considerably as indicated by the Water Quality Index at the selected sampling sites. Seventy-four ciliate species representing nine classes were recorded. Based on the Shannon diversity index, maximum species diversity was found at the point where the river enters Delhi. The saprobity index showed the river water was beta-mesosaprobic when the river enters Delhi and alpha-mesosaprobic at downstream sites after the first major drain outfall. Significant relationship between the spatial variation in ciliate communities and abiotic parameters indicate that ciliates can be used as effective bioindicators of pollution in the River Yamuna.     

Enumeration and speciation of group D streptococci from above and below a sewer outfall,their susceptibilities to six antibiotics and a comparison with clinical isolates

Isolates of group D streptococci from above and below a sewer outfall and a series of clinical isolates have been speciated to sub-species level. From below the sewer outfall, Streptococcus faecalis var. faecalis predominates whereas above the outfall, S. faecium var. casseliflavus predominates. S. faecalis var. faecalis, S. faecalis var. liquefaciens and S. faecalis var. zymogenes were the predominant sub-species in the clinical isolates where S. faecium var. casseliflavus was virtually absent. S. faecalis var. liquefaciens and S. faecalis var. zymogenes were uncommon in the environmental isolates. S. faecium and S. durans were more abundant in the environmental than in the clinical isolates. The use of group D streptococci as indicators of faecal pollution would seem more suited to higher, rather than lower, levels of pollution. A statistically significant increase in resistance to antibiotics (ampicillin, penicillin, streptomycin, gentamicin, erythromycin and tetracycline) was seen in isolates from below the outfall compared with those from above and a further significant increase was seen in the clinical isolates compared with the former. Resistance to tetracycline was most common and ampicillin was the only antibiotic tested to which no resistance was detected. Multiple antibiotic resistance was rare in the environmental isolates. Even in moderately polluted water, there is not a large pool of antibiotic resistance.     

四川兴文石海小岩湾园区植物群落物种组成与多样性初探

通过野外调查,对世界地质公园四川兴文石海的小岩湾代表性园区植物群落物种组成进行统计分析,结果表明,该园区共有植物48科82属90种,其中天坑物种最丰富(75种),3个溶蚀洼地52种,猴子潭种类最少(12种)。采用香农指数对几个植物群落物种的多样性进行比较,香农指数H'由高到低依次为:天坑(4.056) >溶蚀洼地Ⅰ(2.882) >溶蚀洼地Ⅱ(2.878) >猴子潭(2.821) >溶蚀洼地Ⅲ(2.258),表明天坑物种多样性指数最高,溶蚀洼地Ⅰ和Ⅱ其次,猴子潭地区物种多样性较低,溶蚀洼地Ⅲ最低。建议对石漠化地区植被和植物群落进行深入研究,同时加强对该区植被的保护力度。     

Coliforms as a measure of sewage contamination of the River Zambezi

The effect of releasing untreated sewage from Victoria Falls Town into the Zambezi river was determined by bacteriological examination of water samples collected upstream of Victoria Falls and for 22 km downstream. Most probable numbers of faecal coliforms and Escherichia coli were estimated. Water upstream of the falls, on the Zimbabwe side of the river, contained between seven and 130 E. coli per 100 ml. This section of the river was free from major sources of faecal pollution. Below the falls, but before the Victoria Falls Town sewage outfall, numbers of E. coli were between 1.8 X 10(2) and 1.4 X 10(4)/100 ml, indicating the existence of a sewage discharge other than that from Victoria Falls Town. The river was also highly polluted from the Victoria Falls Town sewage outfall to a point 18.6 km downstream. The highest E. coli count was 3.3 X 10(4)/100 ml and declined slowly to 1.4 X 10(3)/100 ml 18.6 km downstream of the outfall.     

再生水补水对河道底泥细菌群落结构的影响

以北京市永定河麻峪湿地再生水补水口附近河道底泥为研究对象,应用末端限制性片段长度多态性(Terminal Restriction Fragment Length Polymorphism,T-RFLP)技术探究再生水补水口附近底泥细菌群落结构的空间差异特征以及环境因子所产生的影响,并借助典范对应分析(Canonical Correspondence Analysis,CCA)方法分析麻峪湿地底泥细菌群落结构空间差异特征的形成原因。分析结果表明:河道底泥微生物群落对再生水的净化主要发生在距补水口1200m的范围内,随着再生水与上游来水径向混合净化渐变过程,在补水口2000m处河道底泥微生物群落结构与河道再生水补水口上游趋于相似。基于样点聚类结果的群落结构多样性分析表明随着再生水净化过程的实现微生物综合多样性指数呈现下降的趋势,从均匀度指数的变化趋势看,再生水补水口具有最高均匀度指数,补水口下游1200米处由于非优势菌群所占相对丰度最低以及偶见菌群缺失,导致群落结构比较单一、群落多样性和均匀度指数都最低。CCA方面分析结果表明再生水补水口上游细菌群落与因累积效应形成的重金属有密切关系,补水口出口底泥细菌群落则主要受到总磷和总有机碳的影响较大,而再生水补水与上游来水汇水径向渐变过程可能与氨氮净化具密切关系。研究区的主要优势菌种为假单胞菌属、贪食菌属和芽孢杆菌属,是与再生水中有机碳、氮降解具有密切关系的菌属。     

Coliforms as a measure of sewage contamination of the River Zambezi

The effect of releasing untreated sewage from Victoria Falls Town into the Zambezi river was determined by bacteriological examination of water samples collected upstream of Victoria Falls and for 22 km downstream. Most probable numbers of faecal coliforms and Escherichia coli were estimated. Water upstream of the falls, on the Zimbabwe side of the river, contained between seven and 130 E. coli per 100 ml. This section of the river was free from major sources of faecal pollution. Below the falls, but before the Victoria Falls Town sewage outfall, numbers of E. coli were between 1.8 × 10² and 1.4 × 10⁴/100 ml, indicating the existence of a sewage discharge other than that from Victoria Falls Town. The river was also highly polluted from the Victoria Falls Town sewage outfall to a point 18.6 km downstream. The highest E. coli count was 3.3 × 10⁴/100 ml and declined slowly to 1.4 × 10³/100 ml 18.6 km downstream of the outfall.