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1.
Y Tsunashima  K Moro  B Chu  T Y Liu 《Biopolymers》1978,17(2):251-265
Group-specific polysaccharides isolated by means of a cetavlon procedure are immunogenic in man and induce protective immunity against meningococcal meningitis. Minute quantities of the polymers in solution can act as vaccines. We now report the first characterization of a fractionated (C-1) group C polysaccharide in 0.4KM KCl and 0.05M sodium acetate by means of light-scattering spectroscopy. Independent measurements of refractive index increments, absolute scattered intensities, angular scattering intensities and line widths as a function of scattering angles and delay times at different concentrations using incident wavelengths of 632.8 nm from a He–Ne laser and of 488 nm from an argon–ion laser yield information on aggregation properties, molecular weight (Mr), radius of gyration 〈r0g1/2z, translational diffusion coefficient 〈D〉0z, and second virial coefficients A2 and B2 of C-1 polysaccharide. At relatively high ionic strength (0.04M KCl + 0.05M sodium acetate), we obtain for the C-1 polysaccharide in solution Mr = 5.15 × 105, 〈r2g1/2z = 345 Å, A2 = 1.25 × 10?4 ml/g, 〈D〉 = 1.16 × 10?7 cm2/sec with a corresponding Stokes radius of 240 Å and B2 = 4.4 ml/g. A2 and B2 are the second virial coefficients from intensity- and diffusion-coefficient measurements. The C-1 polysaccharide aggregates in solution and behaves hydrodynamically like random coils. Viscosity and sedimentation studies further confirm our conclusions that the fractioned C-1 polysaccharide aggregates in solution and EDTA can partially break up those aggregates. However, the system remains polydisperse even after adding an excess amount of EDTA. The weight-average molecular weight of the C-1 polysaccharide in solution depends upon ionic strength and exhibits a minimum at ~0.2M KCl. Finally, viscosity, light-scattering, and sedimentation results all show that the aggregated macromolecular system behaves like random-coiled polymers with no measurable shape factors.  相似文献   

2.
Abstract

This is a comprehensive statistical mechanical treatment of the Z form formation in purine- pyrimidine stretches of different length inserted into superhelical DNA. The B-Z transition for short inserts is shown to follow the “all-or-none” principle. Over some critical value of the insert length n, the B-Z transition in the insert proceeds in two stages. The flipping of m base pairs into the Z form is followed by a gradual growth of the Z-form stretch until it occupies the whole insert. By fitting the theoretical transition curves to experimental ones the fundamental thermodynamic parameters of the B-Z transition have been determined: the B-Z junction energy Fj = 4–5kcal?mol?1 and the free energy change ΔFB-Z = 0.5–0.7 kcal?mol?1 under standard salt conditions. Calculations show that the B-Z transition in short purine-pyrimidine inserts may be seriously affected by cruciform formation in the carrier DNA.  相似文献   

3.
ETA subtype selective antagonists constitute a novel and potentially important class of agents for the treatment of pulmonary hypertension, heart failure, and other pathological conditions. In this paper, 60 benzodiazepine derivatives displaying potent activities against ETA and ETB subtypes of endothelin receptor were selected to establish the 3D-QSAR models using CoMFA and CoMSIA approaches. These models show excellent internal predictability and consistency, external validation using test-set 19 compounds yields a good predictive power for antagonistic potency. Statistical parameters of models were obtained with CoMFA-ETA (q 2 = 0.787, r 2 = 0.935, r 2 pred  = 0.901), CoMFA-ETB (q 2 = 0.842, r 2 = 0.984, r 2 pred  = 0.941), CoMSIA-ETA (q 2 = 0.762, r 2 = 0.971, r 2 pred  = 0.958) and CoMSIA-ETB (q 2 = 0.771, r 2 = 0.974, r 2 pred  = 0.953) respectively. Field contour maps (CoMFA and CoMSIA) corresponding to the ETA and ETB subtypes reflects the characteristic similarities and differences between these types. The results of this paper provide valuable information to facilitate structural modifications of the title compounds to increase the inhibitory potency and subtype selectivity of endothelin receptor.  相似文献   

4.
A multiple regression analysis was performed upon selected environmental variables for a series of islands in the British Isles, to establish their effects upon the size of the butterfly fauna, measured as he number of species regularly breeding, SB. So that the data be normally distributed, the regression analyses were performed upon log10 transformed data only, with the data for outliers, mainland Britain and Ireland, the two largest islands, excluded. Most highly correlated with the number of butterfly species breeding upon an island is the number breeding within a 25 km radius of the nearest point of the mainland, r2=0.5941, followed by the correlations with the latitude of the mid-point of the island, r2=0.5541, the number of plant species comprising the island Hora, r2=0.5225, and the distance separating the island from the mainland, r2=0.4514. A partial correlation analysis confirms the importance of the parameters distance separating the island from the mainland, D1, and the size of the faunal source SF, and rejects the importance of the size of the flora and the latitude of the island. This is further confirmed by the results of a step-wise regression analysis, the two variables D1 and SF accounting for 66% of the variation of the butterfly fauna. If an alternative measure of isolation, D2, which allows for the geographical clumping of islands, is combined with the variable SF, then 69% of the variation of the butterfly fauna is accounted for.  相似文献   

5.
SIMtoEXP is a software package designed to facilitate the comparison of biomembrane simulations with experimental X-ray and neutron scattering data. It has the following features: (1) Accepts number density profiles from simulations in a standard but flexible format. (2) Calculates the electron density ε(z) and neutron scattering length density ν(z) profiles along the z direction (i.e., normal to the membrane) and their respective Fourier transforms (i.e., F ε [q z ] and F ν [q z ]). The resultant four functions are then displayed graphically. (3) Accepts experimental F ε (q z ) and F ν (q z ) data for graphical comparison with simulations. (4) Allows for lipids and other large molecules to be parsed into component groups by the user and calculates the component volumes following Petrache et al. (Biophys J 72:2237–2242, 1997). The software then calculates and displays the contributions of each component group as volume probability profiles, ρ(z), as well as the contributions of each component to ε(z) and ν(z).  相似文献   

6.
The aim of this study was to investigate the ability of a novel activity monitor designed to be minimally obtrusive in predicting free‐living energy expenditure. Subjects were 18 men and 12 women (age: 41 ± 11 years, BMI: 24.4 ± 3 kg/m2). The habitual physical activity was monitored for 14 days using a DirectLife triaxial accelerometer for movement registration (TracmorD) (Philips New Wellness Solutions, Lifestyle Incubator, the Netherlands). TracmorD output was expressed as activity counts per day (Cnts/d). Simultaneously, total energy expenditure (TEE) was measured in free living conditions using doubly labeled water (DLW). Activity energy expenditure (AEE) and the physical activity level (PAL) were determined from TEE and sleeping metabolic rate (SMR). A multiple‐linear regression model predicted 76% of the variance in TEE, using as independent variables SMR (partial‐r2 = 0.55, P < 0.001), and Cnts/d (partial r2 = 0.21, P < 0.001). The s.e. of TEE estimates was 0.9 MJ/day or 7.4% of the average TEE. A model based on body mass (partial‐r2 = 0.31, P < 0.001) and Cnts/d (partial‐r2 = 0.23, P < 0.001) predicted 54% of the variance in TEE. Cnts/d were significantly and positively associated with AEE (r = 0.54, P < 0.01), PAL (r = 0.68, P < 0.001), and AEE corrected by body mass (r = 0.71, P < 0.001). This study showed that the TracmorD is a highly accurate instrument for predicting free‐living energy expenditure. The miniaturized design did not harm the ability of the instrument in measuring physical activity and in determining outcome parameters of physical activity such as TEE, AEE, and PAL.  相似文献   

7.
Abstract

The aim of this study was to quantify algal colonisation on anthropogenic surfaces (viz. building facades and roof tiles) using chlorophyll a (chl a) as a specific biomarker. Chl a was estimated as the initial fluorescence F0 of ‘dark adapted’ algae using a pulse-modulated fluorometer (PAM-2000). Four isolates of aeroterrestrial green algae and one aquatic isolate were included in this study. The chl a concentration and F0 showed an exponential relationship in the tested range between 0 and 400 mg chl a m?2. The relationship was linear at chl a concentrations <20 mg m?2. Exponential and linear models are presented for the single isolates with large coefficients of determination (exponential: r2 > 0.94, linear: r2 > 0.92). The specific power of this fluorometric method is the detection of initial algal colonisation on surfaces in thin or young biofilms down to 3.5 mg chl a m?2, which corresponds to an abundances of the investigated isolates between 0.2 and 1.5 million cells cm?2.  相似文献   

8.
9.
Proceeding from three previously derived expressions for the intensity of nitrification in soil as a function of time (logΣN=K.logt+q), as a function of incubation moisture (logΣN=A.pF i+B), as a function of initial moisture (logΣN=C.pF v+D), it was shown that the nitrification intensity as a function of time and of moisture can be expressed by the bilinear function log ΣN=a.pF i.logT+b.pF i+c.logt+d; as a function of time and of initial moisture by the bilinear function logΣ=N=a.pF v.logt+b.pF v+c.logt+d; as a function of initial and incubation moisture by the bilinear function log ΣN=a.pF ipF v+b.pF i+c.pF v+d. The intensity of nitrification as a function of time, incubation moisture and initial moisture may be expressed by the multilinear function log ΣN=a.pF i.pF v.logt+b.pF i.pF v+c.pF i.logt+d.pF v.logt+e .pF i+f.pF v=g.logt+h. This function is valid for all the incubation moistures lying between pF i 3.0 and 4.0 and for all initial moistures between 3.5 and 5.9 provided that the incubation temperature remains constant.  相似文献   

10.
Highly purified tRNAs from Drosophila melanogaster were iodinated with 125I and hybridized to squashes of polytene chromosomes of Drosophila salivary glands followed by autoradiography to localize binding sites. Most tRNAs hybridize strongly to more than one site and weakly to one or more additional sites. The major sites for various tRNAs are the following: tRNA 2 Arg , 42A, 84F1,2; tRNA 2 Asp , 29DE; tRNA 3 Gly , 22BC, 35BC, 57BC; tRNA 2 Lys , 42A, 42E; tRNA 5 Lys , 84AB, 87B; tRNA 2 Met , 48B5–7, 72F1–2, 83F-84A; tRNA 3 Met , 46A1–2, 61D1–2, 70F1–2; tRNA 4 Ser , 12DE, 23E; tRNA 7 Ser , 12DE, 23E; tRNA 3a Val , 64D; tRNA 3b Val , 84D3–4, 92B1–9; tRNA 4 Val , 56D3–7, 70BC.  相似文献   

11.
The interspecific scaling exponents of body mass M and diameter D with respect to length L were determined to evaluate the predictions of three scaling hypotheses (geometric, stress, and elastic similitude). The relation between M and L was determined for data from a total of 133 aquatic and terrestrial species (66 plant and 67 animal species); the relation between D and L was determined independently for a total of 753 aquatic and terrestrial species (667 plant and 86 animal species). Organisms were crudely classified as to their geometry (spheres, spheroids, cylinders) and shape (defined as the body slenderness factor, L/D) to examine whether geometry and shape evinced size-dependent variations. Regression indicated M = 1.29L2.95 (r2 = 0.91, N = 133; αRMA = 3.09 ± 0.088). The stress and elastic similitude (which respectively predict αRMA = 5 and αRMA = 4) were rejected; geometric similitude was not (αRMA = 3). For animals and plants, αRMA = 2.81 ± 0.061 (r2 = 0.98), and αRMA = 2.95 ± 0.093 (r2 = 0.94), respectively. For aquatics and terrestrial organisms, αRMA = 2.82 ±0.134 (r2 = 0.97, N = 36), and αRMA = 3.08 ±0.111 (r2 = 0.89, N = 97), respectively. These results were interpreted to support the hypothesis of geometric similitude. For the pooled plant and animals data, D = 0.05L1.00 (r2 = 0.95; αRMA = 1.03 ± 0.009), which was compatible with the hypothesis of geometric similitude. For plants, D = 0.05L1.06 (r2 = 0.95; αRMA = 1.09). For animals, D = 0.29L0.98 (r2 = 0.95; αRMA = 1.01 ± 0.025). Also, for aquatics, αRMA = 0.951 ± 0.151, whereas for terrestrial plants and animals, αRMA = 1.03 ± 0.089. Although the scaling exponent for D differed among individual groupings of animals and plants, the results of regression analyses were interpreted to indicate that, on the average, body diameter scaled isometrically with respect to length as predicted by geometric similitude. For the pooled data set, organic shape varied over 3 orders of magnitude; L varied over 9 orders of magnitude reflecting 22 orders of magnitude of M. In terms of body geometry and the absolute numbers of species in the total data set: spherical shaped species (L = D) < unassigned species < prolate spheroidal species < cylindrical (squat < slender) species. The largest organisms in the data set were slender (L/D > 20) cylindrical plants; the smallest organisms were spherical plants and animals. Although not subject to statistical inference, these data were interpreted to indicate that organic shape and geometry evince size-dependent variations. These variations as well as size-dependent changes in bulk density are hypothesized to account for the scaling exponents of M and D determined for individual plant and animal clades and grades.  相似文献   

12.
1. Carbon isotope ratios (δ13CD) of a herbivorous zooplankter, Daphnia middendorfiana and several environmental variables were investigated during four annual production cycles (1988–92) in Smith Lake, Alaska to determine factors that affect the seasonal and interannual variability of δ13CD. 2. δ13CD varied from ?44.7 to ?31.5 ppt and was significantly correlated with Chl a (r = 0.66, P = 0.0001), weakly correlated with CO2(aq) (r = 0.31, P = 0.07) and uncorrelated with δ13CDIC (r = 0.10, P = 0.70). Carbon isotope fractionation was minimal when Chl a appeared to be optimal. The largest 13C fractionation was associated with the lowest Chl a during early and mid winter periods. 3. δ13CD was also significantly correlated with water temperature (r = 0.480, P = 0.0001) and photoperiod (r = 0.62, P = 0.0001), probably suggesting a critical role of physical forcing, particularly solar energy input, in affecting algal photosynthesis and δ13CD in this subarctic lake. 4. There was a large interannual variability of δ13CD among ice-cover periods which was partly explained by interwinter differences in the amount of snowfall that affected the flux of solar irradiance to the ice-covered lake. 5. Other explanations for δ13CD variability such as species succession, changes in algal cell size and differential use of CO2(aq) and HCO3 were also considered, but cannot account for the observations reported here.  相似文献   

13.
A survey of the genetic variability in deer mouse populations was performed using specimens collected from six different islands on a lake covering approximately 50 km2. Random amplified polymorphic DNA (RAPD) was used to measure the extent of the genetic differences in this insular system. An analysis of molecular variance (AMOVA) revealed that populations are clearly separated at this microgeographic scale (F st = 0.13863; P < 0.001). The homogeneity of molecular variance test (HOMOVA) indicated that within-population levels vary greatly (B p = 0.76831; P < 0.001). The within-population molecular variance was found to be mainly correlated with the accessibility of the islands, computed as the inverse of the geographic distance separating an island from the lakeshore (r = 0.916; P < 0.003). Received: March 5, 1999 / Accepted: July 16, 1999  相似文献   

14.
The fate of tumors induced by Rous sarcoma virus (RSV) was determined in anF 2 population segregating at three alloantigen loci. TheF 1 resulted from crossing tumor-resistant RPRL line 61 (B 2 B 2 D 3 D 3 I 2 I 2) with tumor-susceptible RPRL line 151 (B 5 B 5 D 4 D 4 I 8 I 8). Among theF 2 segregantsB 2 B 2,B 2 B 5, andB 5 B 5, the percentage of chicks dying of terminal tumors (by 70 days post-inoculation) was 5, 26, and 93, respectively (P0.01). NeitherD orI genotypes nor sex significantly affected tumor growth. In chickens with terminal tumors, the incidence of metastatic lesions was also significantly associated withB genotypes. Thus, the MHC chromosomal region in the chicken appears to exert a crucial role in determining the outcome of RSV-induced tumors.  相似文献   

15.
Despite the recognition of the beneficial role of cardiorespiratory power (CRP) for health and sport performance, the development of this physical fitness parameter in adolescent soccer players was not well studied. Aim of this cross-sectional study was to investigate the effect of age on CRP of adolescent soccer players, the influence of anthropometric characteristics and body composition on it, and to establish normative data. Male adolescent (N = 274; aged 12.07–20.98 y), classified in nine one-year age-groups, child (N = 12, aged 7.71–11.8 y) and adult players (N = 22; aged 21.12–31.59 y), all members of competitive soccer clubs, were examined for anthropometric characteristics and body composition and they performed Physical Working Capacity in heart rate 170 test (PWC170) on cycle ergometer. Analysis of variance revealed significant difference between age groups with respect to PWC170 in absolute (F 10,.297 = 29.58, P < 0.001, η2 = 0.5), relative to body mass (F 10,.297 = 5.28, P < 0.001, η2 = 0.15) and relative to fat free mass values (F 10.297 = 4.98, P < 0.001, η2= 0.14). In addition, age was in positive association with these parameters (r = 0.6, P < 0.001, r = 0.24, P < 0.001 and r = 0.23, P < 0.001, correspondingly). The main finding of this study was that CRP increased during developmental period in soccer players, even when it was adjusted to body mass or FFM, which increased during development. This documentation of the development of CRP provided useful tool for coaches and fitness trainers in order to apply optimal exercise interventions for health and performance.  相似文献   

16.
In order to identify a high carbon-sequestering microalgal strain, the physiological effect of different concentrations of carbon sources on microalgae growth was investigated. Five indigenous strains (I-1, I-2, I-3, I-4 and I-5) and a reference strain (I-0: Coccolithus pelagicus 913/3) were subjected to CO2 concentrations of 0.03–15% and NaHCO3 of 0.05–2 g CO2 l–1. The logistic model was applied for data fitting, as well as for estimation of the maximum growth rate (μmax) and the biomass carrying capacity (Bmax). Amongst the five indigenous strains, I-3 was similar to the reference strain with regards to biomass production values. The Bmax of I-3 significantly increased from 214 to 828 mg l–1 when CO2 concentration was increased from 0.03 to 15% (r = 0.955, P = 0.012). Additionally, the Bmax of I-3 increased with increasing NaHCO3 (r = 0.885, P = 0.046) and was recorded at 153 mg l–1 (at 0.05 g CO2 l–1) and 774 mg l–1 at (2 g CO2 l–1). Relative electron transport rate (rETR) and maximum quantum yield (Fv/Fm) were also applied to assess the impact of elevated carbon sources on the microalgal cells at the physiological level. Isolate I-3 displayed the highest rETR confirming its tolerance to higher quantities of carbon. Additionally, the decline in Fv/Fm with increasing carbon was similar for strains I-3 and the reference strain. Based on partial 28s ribosomal RNA gene sequencing, strain I-3 was homologous to the ribosomal genes of Chlorella sp.  相似文献   

17.
The effects of alien invasive water plants (Eichhornia crassipes, Salvinia molesta, Imperata cylindrical and Mikania micrantha) on the pheasant-tailed jacana (Hydrophasianus chirugus) was studied in three reservoirs from June 2004 to May 2005 at the Annaiwilundawa Ramsar site of northwestern Sri Lanka. Jacanas were observed in significantly fewer numbers among invasive plants and open water and in significantly higher numbers among grass and floating leaved plants than predicted from the proportions of the reservoirs covered by these habitat types (Annaiwilundawa χ2 = 64.35, P < 0.0001; Suruwila χ2 = 45.66, P < 0.0001; Maiyawa χ2 = 33.35, P < 0.0001). Feeding was the major activity of the pheasant-tailed jacana during the study period [analysis of variance (ANOVA) F = 79.58, P < 0.0001 in the morning and F = 85.53, P < 0.0001 in the evening]. Jacanas preferred to forage in grass and floating leaved vegetation compared to invasive plants and open water (ANOVA F = 168.63, P < 0.001). The jacana population was significantly positively correlated with water level in all three reservoirs. (Spearman’s rank correlation, Annaiwilundawa z = 2.035, P < 0.05; Suruwila z = 2.19, P < 0.05; Maiyawa z = 2.563, P < 0.05). The findings of this study revealed that the most critical factor for the occupation of the reservoirs by jacanas was the water level and that the spread of the invasive plants in these reservoirs were detrimental to jacanas, since these plants deprived jacanas of useful foraging habitats.  相似文献   

18.
We have used the polyelectrolyte theory to study the ionic strength dependence of the B-Z equilibrium in DNA. A DNA molecule is molded as an infinitely long continuously charged cylinder of radius a with reduced linear charge density q. The parameters a and q for the B and Z forms were taken from X-ray data: aB = 1nm, qB = 4.2, aZ = 0.9 nm and qZ = 3.9. A simple theory shows that at low ionic strengths (when Debye screening length rD much greater than a) the electrostatic free energy difference FelBZ = FelZ - FelB increases with increasing ionic strength since qB greater than qZ. At high ionic strengths (when rD much less than a) the FelBZ would go on growing with increasing ionic strength if the inequality qB/aB greater than qZ/aZ were valid. In the converse case when qZ/qB greater than aZ/aB the FelBZ value decreases with increasing salt concentration at high ionic strength. Since X-ray data correspond to the latter case, theory predicts that the FelBZ value reaches a maximum at an intermediate ionic strength of about 0.1 M (where rD approximately a). We also performed rigorous calculations based on the Poisson-Boltzmann equation. These calculations have confirmed the above criterion of nonmonotonous behaviour of the FelBZ value as a function of ionic strength. Different theoretical predictions for the B-Z transition in linear and superhelical molecules are discussed. Theory predicts specifically that at a very low ionic strength the Z form may prove to be more stable than the B form.(ABSTRACT TRUNCATED AT 250 WORDS)  相似文献   

19.
Objective: Patients with moderate and severe obesity, because of their physical size, often cannot be evaluated with conventional body composition measurement systems. The BOD POD air displacement plethysmography (ADP) system can accommodate a large body volume and may provide an opportunity for measuring body density (Db) in obese subjects. Db can be used in two‐ or three‐compartment body composition models for estimating total body fat in patients with severe obesity. The purpose of this study was to compare Db measured by ADP to Db measured by underwater weighing (UWW) in subjects ranging from normal weight to severely obese. Research Methods and Procedures: Db was measured with UWW and BOD POD in 123 subjects (89 men and 34 women; age, 46.5 ± 16.9 years; BMI, 31.5 ± 7.3 kg/m2); 15, 70, and 10 subjects were overweight (25 ≤ BMI < 30 kg/m2), obese (30 ≤ BMI < 40 kg/m2), and severely obese (BMI ≥ 40 kg/m2), respectively. Results: There was a strong correlation between Db(kilograms per liter) measured by UWW and ADP (r = 0.94, standard error of the estimate = 0.0073 kg/L, p < 0.001). Similarly, percent fat estimates from UWW and ADP using the two‐compartment Siri equation were highly correlated (r = 0.94, standard error of the estimate = 3.58%, p < 0.001). Bland‐Altman analysis showed no significant bias between Db measured by UWW and ADP. After controlling for Db measured by ADP, no additional between‐subject variation in Db by UWW was accounted for by subject age, sex, or BMI. Discussion: Body density, an important physical property used in human body composition models, can be accurately measured by ADP in overweight and obese subjects.  相似文献   

20.
One-year old sweet almond (Prunus dulcis) seedlings were submitted to four levels of salt stress induced by NaCl, namely 0.3, 0.5, 0.7, and 1.0 S m−1. Effects of salt stress on a range of chlorophyll (Chl) fluorescence parameters (Chl FPs) and Chl contents were investigated in order to establish an eco-physiological characterization of P. dulcis to salinity. Salt stress promoted an increase in F0, Fs, and F0/Fm and a decrease in Fm, F′m, Fv/Fm, qP, ΔF/F′m, Fv/F0, and UQF(rel), in almost all Chl fluorescence yields (FY) and FPs due to its adverse effect on activity of photosystem 2. No significant changes were observed for quenchings qN, NPQ, and qN(rel). The contents of Chl a and b and their ratio were also significantly reduced at increased salt stress. In general, adverse salinity effects became significant when the electric conductivity of the nutrient solution (ECn) exceeded 0.3 S m−1. The most sensitive salt stress indicators were Fv/F0 and Chl a content, and they are thus best used for early salt detection in P. dulcis. Monitoring of a simple Chl FY, such as F0, also gave a good indication of induced salt stress due to the significant correlations observed between the different Chl FYs and FPs. Even essential Chl FYs, like F0, Fm, F′m, and Fs, and mutually independent Chl FPs, like Fv/F0 and qP, were strongly correlated with each other.  相似文献   

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