Epiphytic Rotifer Abundance and Diversity in Moss Patches in Bogs and Fens in the Polesie National Park (Eastern Poland)

Moss‐inhabiting rotifers were studied in 2 raised bogs, 2 poor fens (i.e. intermediate between raised bogs and typical fens), 1 typical fen, and 1 base‐rich fen, located in the Polesie National Park (eastern Poland). Moss samples were collected from April till November 2007 in monthly intervals. In total, 42 taxa of Monogononta and 26 of Bdelloidea were found. Analysis of variance (ANOVA) detected highly significant differences between the habitats in conductivity (F = 37.19, P < 0.001), total organic content (F = 9.34, P < 0.001), total P (F = 51.71, P < 0.001), and nitrate N (F = 48.98, P < 0.001). The mean density of rotifers was the highest in a bog dominated by Sphagnum angustifolium Jensen (Durne Bagno), and the lowest in the base‐rich fen (Bubnów). In all the studied habitats, the Bdelloidea were the most abundant, accounting for 56 to 85% of the total rotifer density. Canonical correspondence analysis (CCA), made for selected physicochemical parameters and taxa, confirms strong relationships between abiotic conditions and selected rotifer taxa: Habrotrocha angusticolis, Dicranophorus capucinus, Keratella serrulata, and Lepadella elliptica. (© 2011 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

EST based phylogenomics of Syndermata questions monophyly of Eurotatoria

Background  

The metazoan taxon Syndermata comprising Rotifera (in the classical sense of Monogononta+Bdelloidea+Seisonidea) and Acanthocephala has raised several hypotheses connected to the phylogeny of these animal groups and the included subtaxa. While the monophyletic origin of Syndermata and Acanthocephala is well established based on morphological and molecular data, the phylogenetic position of Syndermata within Spiralia, the monophyletic origin of Monogononta, Bdelloidea, and Seisonidea and the acanthocephalan sister group are still a matter of debate. The comparison of the alternative hypotheses suggests that testing the phylogenetic validity of Eurotatoria (Monogononta+Bdelloidea) is the key to unravel the phylogenetic relations within Syndermata. The syndermatan phylogeny in turn is a prerequisite for reconstructing the evolution of the acanthocephalan endoparasitism.     

Rotifers from the Canadian high arctic (Devon Island,Northwest territories)

Samples from eight water bodies in the region of Truelove and Sparbo Hardy Lowland, Devon Island (75 ° 30 N, 86 ° 00 W) yielded 70 taxa (4 Bdelloidea, 66 Monogononta) of rotifers, nineteen of which are new records for the Canadian High Arctic.     

Contribution to the rotifer fauna of subarctic Greenland (Kangerlussuaq and Ammassalik area)

Six water bodies in the region of Kangerlussuaq, West Greenland (67° 30 N, 50° 46 W), and four near Ammassalik, East Greenland (65° 36 N, 37° 38 W) were sampled. Sixty-nine taxa (2 Bdelloidea, 67 Monogononta) are reported, forty-six of which represent new records for Greenland. Proales pejleri n. sp. is described.     

A Mitogenomic Re-Evaluation of the Bdelloid Phylogeny and Relationships among the Syndermata

Molecular and morphological data regarding the relationships among the three classes of Rotifera (Bdelloidea, Seisonidea, and Monogononta) and the phylum Acanthocephala are inconclusive. In particular, Bdelloidea lacks molecular-based phylogenetic appraisal. I obtained coding sequences from the mitochondrial genomes of twelve bdelloids and two monogononts to explore the molecular phylogeny of Bdelloidea and provide insight into the relationships among lineages of Syndermata (Rotifera + Acanthocephala). With additional sequences taken from previously published mitochondrial genomes, the total dataset included nine species of bdelloids, three species of monogononts, and two species of acanthocephalans. A supermatrix of these 10-12 mitochondrial proteins consistently recovered a bdelloid phylogeny that questions the validity of a generally accepted classification scheme despite different methods of inference and various parameter adjustments. Specifically, results showed that neither the family Philodinidae nor the order Philodinida are monophyletic as currently defined. The application of a similar analytical strategy to assess syndermate relationships recovered either a tree with Bdelloidea and Monogononta as sister taxa (Eurotatoria) or Bdelloidea and Acanthocephala as sister taxa (Lemniscea). Both outgroup choice and method of inference affected the topological outcome emphasizing the need for sequences from more closely related outgroups and more sophisticated methods of analysis that can account for the complexity of the data.     

Zoogeography of the Southeast Asian Rotifera

The distribution and taxonomic composition of Rotifera in Southeast Asia is reviewed. For some countries, records are poor: Brunei, Cambodia and Laos are almost terra incognitafor rotifers (<10 taxa recorded), while the Thai rotifer fauna is the best documented (ca. 310 taxa on record). However, analysis of the available data is impeded by fuzzy taxonomy and the questionable reliability of many records. Most studies focus on the pelagic or littoral of freshwater habitats. Other habitats are largely ignored. Similarly, few studies deal comprehensively with illoricate Monogononta, sessile Flosculariacea and Collothecacea and, especially, Bdelloidea. The genera Lecane, Brachionus and Trichocerca are the best represented, with littoral taxa predominant. Fisheries-related studies dealing with highly productive pelagic environments tend to over report the contribution of Brachionus. Most taxa are thermophilic character, exemplified by the dominance of tropic-centred Lecaneand Brachionus. Some cold-water taxa have been recorded, but the relative climatological homogeneity of the region and low number of studies on high-altitude environments prevent the discrimination of clear latitudinal or altitudinal variation in the distribution of rotifers within Southeast Asia. The majority of Southeast Asian rotifers are widely distributed, including true cosmopolites and thermophilic taxa. There are several local or Oriental endemic Rotifera, mostly Lecane. The American Brachionus havanaensis and Keratella americana appear to have been introduced to the region. The taxonomy of some Rotifera described from the region is commented upon; Brachionus murphyiSudzuki is recognised as senior synonym of B. niwati Sanoamuang et al. (syn. nov.). Some cases of geographical and/or ecological vicariant species-pairs are suggested. The Southeast Asian rotifer fauna contains a sizeable fraction of taxa occurring in the tropical regions of the Old World, most of which also occur in tropical Australia or the Austro-Malayan region. A tropical Australasian faunal component is present, but consists of few taxa only. Hence, affinities between the rotifer fauna of the Ethiopian, Oriental and tropical Australian and Austro-Malayan regions are supported, rather than an affinity between the Indo-Asian or Indo-Malaysian and tropical Australian fauna.     

On the evolution and morphology of the rotiferan trophi, with a cladistic analysis of Rotifera

The phylogeny of Rotifera was examined in different computer‐generated cladistic analyses, including Seisonidea, Bdelloidea, Flosculariacea, Collothecacea and all ploimids treated on family level. The analyses were based on a character matrix solely dealing with morphological characters, primarily based on the trophi morphology. Limnognathia maerski (Micrognathozoa), Rastrognathia macrostoma and Gnathostomula paradoxa (Gnathostomulida) were used as outgroups. The cladistic analysis performed by paup produced 288 most parsimonious trees. peewee analyses produced between 140 and 432 trees, depending on the concavity value. The monophyly of Eurotatoria, Monogononta and Ploima was confirmed in all obtained trees. All analyses suggested a division of Ploima into major clades. One clade corresponded to Transversiramida while the other contained all other ploimid taxa and recognized Antrorsiramida as a monophylum. Based on the obtained results a scenario for the trophi evolution is proposed. The analyses suggested that the presence of an incus is synapomorphic for Gnathifera while mallei are synapomorphic for Micrognathozoa and Rotifera. The ancestral rotifer trophi probably resembled those in Harringia (Asplanchnidae).     

Old and new data on Seisonidea (Rotifera)

Class Seisonidea consists of one marine genus, Seison, with two species (S. nebaliae and S. annulatus) which are epizoic on the crustacean Nebalia. Seisonidea are the only rotifers whose reproduction is strictly bisexual. They also possess the unusual feature of having well-developed males. In this paper we review the literature concerning biogeographical distribution, relationships with their host, and morphology, and present new information obtained with SEM and optical microscopy of both living animals and serial sections.Some seisonid characters, such as the paired retrocerebral organ, nervous system, and trophi, suggest that they hold a primitive position within phylum Rotifera. However, they do share features with other rotifers: paired gonads and an unusual locomotory behavior with Bdelloidea; lateral antennae, cellular stomach wall, arrangement of intracytoplasmic lamina, and other characters with Monogononta. Some features are peculiar to Seison: obligatory amphimixis, endolecythal eggs, encysted spermatozoa, unique mastax, and absence of copulatory organ in males and of vitellaria in females. Reduction of the corona and absence of resistant stages in Seisonidea may be related to their habitat and to their life style. We propose a closer relationship of Seisonidea to Monogononta than previously asserted.     

Diversity of Bacterial Communities in Container Habitats of Mosquitoes

We investigated the bacterial diversity of microbial communities in water-filled, human-made and natural container habitats of the mosquitoes Aedes aegypti and Aedes albopictus in suburban landscapes of New Orleans, Louisiana in 2003. We collected water samples from three classes of containers, including tires (n = 12), cemetery urns (n = 23), and miscellaneous containers that included two tree holes (n = 19). Total genomic DNA was extracted from water samples, and 16S ribosomal DNA fragments (operational taxonomic units, OTUs) were amplified by PCR and separated by denaturing gradient gel electrophoresis (DGGE). The bacterial communities in containers represented diverse DGGE-DNA banding patterns that were not related to the class of container or to the local spatial distribution of containers. Mean richness and evenness of OTUs were highest in water samples from tires. Bacterial phylotypes were identified by comparative sequence analysis of 90 16S rDNA DGGE band amplicons. The majority of sequences were placed in five major taxa: Alpha-, Beta- and Gammaproteobacteria, Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, and an unclassified group; Proteobacteria and Bacteroidetes were the predominant heterotrophic bacteria in containers. The bacterial communities in human-made containers consisted mainly of undescribed species, and a phylogenetic analysis based on 16S rRNA sequences suggested that species composition was independent of both container type and the spatial distribution of containers. Comparative PCR-based, cultivation-independent rRNA surveys of microbial communities associated with mosquito habitats can provide significant insight into community organization and dynamics of bacterial species. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Global diversity of Isopod crustaceans (Crustacea; Isopoda) in freshwater

The isopod crustaceans are diverse both morphologically and in described species numbers. Nearly 950 described species (∼9% of all isopods) live in continental waters, and possibly 1,400 species remain undescribed. The high frequency of cryptic species suggests that these figures are underestimates. Several major freshwater taxa have ancient biogeographic patterns dating from the division of the continents into Laurasia (Asellidae, Stenasellidae) and Gondwana (Phreatoicidea, Protojaniridae and Heterias). The suborder Asellota has the most described freshwater species, mostly in the families Asellidae and Stenasellidae. The suborder Phreatoicidea has the largest number of endemic genera. Other primary freshwater taxa have small numbers of described species, although more species are being discovered, especially in the southern hemisphere. The Oniscidea, although primarily terrestrial, has a small number of freshwater species. A diverse group of more derived isopods, the ‘Flabellifera’ sensu lato has regionally important species richness, such as in the Amazon River. These taxa are transitional between marine and freshwater realms and represent multiple colonisations of continental habitats. Most species of freshwater isopods species and many genera are narrow range endemics. This endemism ensures that human demand for fresh water will place these isopods at an increasing risk of extinction, as has already happened in a few documented cases. Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. Guest editors: E. V. Balian, C. Lévêque, H. Segers & K. Martens Freshwater Animal Diversity Assessment     

The phylogeny of rotifers: molecular,ultrastructural and behavioural data

This work discusses the nature and significance of molecular, ultrastructural, and behavioural characters that can be used in phylogenetic analyses of rotifers.Recent molecular research has demonstrated the presence of very small amounts of 4-hydroxyproline in rotifers, probably arising from acetyl-cholinesterase or glycoproteins. Thus, rotifers appear to be the first known Metazoa without collagen.Ultrastructural work also has made some interesting discoveries. (1) The myelinic cuticle of the integument and pharynx of gastrotrichs is present in the pharynx of at least two rotifers (Philodina and Brachionus) and some Annelida. (2) The intracytoplasmic lamina (IL) of the syncytial ingestive integument of Acanthocephala is similar to the IL of the syncytial stomach of Bdelloidea. (3) The fibrous terminal web of primitive epidermal ciliated cells may have evolved in the skeletal IL of the syncytial, aciliated integument of rotifers. (4) Using the ultrastructural features of the skeletal, IL of the integument, I derived two possible dendograms of rotifer evolution. (5) These models and other ultrastructural data predict that Bdelloidea should be separated from Monogononta, while Seison has several characters which suggest that it should be more closely aligned to the Monogononta than previously proposed.Molecular and ultrastructural data suggest that rotifers are primitive Metazoa, probably derived by neoteny from ancestral, ciliated larvae. Finally, I argue that information on sensory organs and the behaviour of rotifers may offer unique insights into the evolution of the phylum.     

Phylogenetic analyses of endoparasitic Acanthocephala based on mitochondrial genomes suggest secondary loss of sensory organs

The metazoan taxon Syndermata (Monogononta, Bdelloidea, Seisonidea, Acanthocephala) comprises species with vastly different lifestyles. The focus of this study is on the phylogeny within the syndermatan subtaxon Acanthocephala (thorny-headed worms, obligate endoparasites). In order to investigate the controversially discussed phylogenetic relationships of acanthocephalan subtaxa we have sequenced the mitochondrial (mt) genomes of Echinorhynchus truttae (Palaeacanthocephala), Paratenuisentis ambiguus (Eoacanthocephala), Macracanthorhynchus hirudinaceus (Archiacanthocephala), and Philodina citrina (Bdelloidea). In doing so, we present the largest molecular phylogenetic dataset so far for this question comprising all major subgroups of Acanthocephala. Alongside with publicly available mt genome data of four additional syndermatans as well as 18 other lophotrochozoan (spiralian) taxa and one outgroup representative, the derived protein-coding sequences were used for Maximum Likelihood as well as Bayesian phylogenetic analyses. We achieved entirely congruent results, whereupon monophyletic Archiacanthocephala represent the sister taxon of a clade comprising Eoacanthocephala and monophyletic Palaeacanthocephala (Echinorhynchida). This topology suggests the secondary loss of lateral sensory organs (sensory pores) within Palaeacanthocephala and is further in line with the emergence of apical sensory organs in the stem lineage of Archiacanthocephala.     

Evidence from a protein-coding gene that acanthocephalans are rotifers

Abstract. Rotifera and Acanthocephala are generally regarded as separate phyla sharing a basal position among triploblast protostomes. This paper presents the first molecular phylogenetic examination of the relationship of Acanthocephala to all three rotifer classes, Seisonidea, Monogononta, and Bdelloidea. Inclusion of Acanthocephala within Rotifera, probably as a sister-taxon to a clade composed of Bdelloidea and Monogononta (the Eurotatoria), is strongly supported by both parsimony and distance methods, using a region of the nuclear coding gene hsp82. Previous molecular evidence for the inclusion of Acanthocephala in the Rotifera suggested that Acanthocephala is a sister-taxon of Bdelloidea, forming the clade Lemniscea. No support is found for this clade, and evidence is presented that the monogonont rotifer used in those analyses, Brachionus plicatilis , may be evolving in an anomalous manner.     

Broad taxonomic sampling of mitochondrial cytochrome c oxidase subunit I does not solve the relationships between Rotifera and Acanthocephala

The phylogenetic relationships within Syndermata (Acanthocephala + Rotifera) are still unresolved. Cladistic morphological analyses support monophyly of Rotifera and Eurotatoria (Bdelloidea + Monogononta), while molecular phylogenies of 18S, 28S, COI, hsp82 and EST propose different topologies, with at least six contrasting scenarios. All these phylogenies are characterized by poor taxon sampling; thus, our aim is to solve the relationships within Syndermata sampling as many sequences as possible from one single locus. We reconstructed phylogenetic relationship using more than 1000 sequences of COI. We performed Maximum Likelihood and Bayesian phylogenetic reconstructions on amino acid alignments, using either Gnathostomulida or Platyhelminthes as an outgroup, and then we performed SH tests to provide confidence on the best phylogenetic hypotheses. All four major clades (Acanthocephala, Bdelloidea, Monogononta and Seisonidea) are always highly supported. The basal relationship among the four clades is not consistently resolved by any of the phylogenetic reconstructions; nevertheless, there is a strong support for a clade of Acanthocephala + Bdelloidea from the SH tests, in agreement with other phylogenies from ribosomal genes and EST analyses.     

Zooplankton assemblages in two reservoirs: one subjected to accentuated water level fluctuations,the other with more stable water levels

The abundance, composition and dynamics of zooplankton were followed in two reservoirs of the River Douro catchment. The Serra Serrada Reservoir is subject to marked fluctuations in water levels. The highest values of total phosphorus, soluble reactive phosphorus, nitrate, water colour and chlorophyll a were found during the minimum level phase. Rotifera was dominant except in late summer and autumn when the cladoceran Ceriodaphnia quadrangula or the copepod Tropocyclops prasinus replaced them as the dominant zooplankton. Among the rotifers the most common taxa were Keratella cochlearis, Conochilus sp. and Asplanchna priodonta. Maximum rotifer density was about 80,000 ind m⁻³ in 2000, 200,000 ind m⁻³ in 2001 and 100,000 ind m⁻³ in 2002. Among the crustacean zooplankton C. quadrangula achieved densities of up to 45,000 ind m⁻³ and T. prasinus, up to 80,000 ind m⁻³. Canonical correspondence analysis revealed a strong contribution of the variation in the stored water volume, temperature, total phosphorus, chlorophyll, nitrates, and water transparency to the observed, significant association between zooplankton assemblage and environmental variables. In the Azibo Reservoir, fluctuations in water level are smaller. Only total phosphorus, cholorophyll and conductivity varied seasonally. Cladocera and Copepoda were dominant during the whole study period. The most abundant taxa were Ceriodaphnia pulchella, Daphnia longispina, Diaphanosoma brachyurum, Bosmina longirostris and Copidodiaptomus numidicus. Cladocera achieved densities of up to 25,000 ind m⁻³ and Copepoda up to 15,000 ind m⁻³. Rotifera in general reached densities of up to 6,000 ind m⁻³. On the basis of canonical correspondence analysis only temperature and conductivity were significantly associated with zooplankton assemblage.     

Taxonomic composition of rotifers in Lake Peipsi

161 rotifer taxa 46 of which are new records for Estonia were identified in the north-western part of Lake Peipsi. The greatest number of taxa occurred in August (93), followed by September (79). In all, 19 families (Monogononta) are represented with 41 genera. The dominant families are Brachionidae (32 taxa) and Synchaetidae (16). The species of Anuraeopsis, Conochilus, Kellicottia, Keratella, Notholca, Polyarthra and Synchaeta are dominating. The taxonomic composition is analysed in the ecological aspect. Some species of zoogeographic interest, including a supposedly endemic Ploesoma peipsiense, are reported.     

Animal species diversity at a land–water ecotone in Mongolia

The biodiversity of wetland ecosystems has received scant attention in Mongolia. We measured amphibian and macroinvertebrate species diversity at a complicated land–water ecotone of a pond within a wetland complex in Shaamar during July 2005. From our study area (0.5-ha grassland and an adjacent pond), we sampled 4,926 animals including 1 mammal, 4 amphibian, and 26 aquatic macroinvertebrate (>2 mm) species with a biomass of 4,444 g. Among these, a backswimmer (Notonectidae sp. 1) was a dominant species, representing 65% of the total number of animals collected (3,209) and 22% of the mass (999 g). Our study area was small but contained 4 amphibian species (Hyla japonica, Rana amurensis, Bufo raddei, and Salamandrella keyserlingii) in a mixed community with Shannon Diversity Index (H′) of 1.678 and Pielou’s Evenness Index (J′) of 1.211. No larvae or tadpoles of any amphibian species were found in the pond, indicating their early metamorphosis. H′ and J′ with 26 macroinvertebrate species were estimated to be 1.828 and 0.561, respectively. This suggests that low macroinvertebrate species diversity relative to high species richness is due to low evenness resulting from considerable numbers of a backswimmer. In 6 sites sampled in the pond, mean water pH revealed high alkalinity (range 9.01–10.45). The presence of our taxa in a highly alkaline environment indicates that they may be alkaliphilic.     

Comparative study of periphyton community structure in long and short-hydroperiod Everglades marshes

The Florida Everglades is a mosaic of short and long-hydroperiod marshes that differ in the depth, duration, and timing of inundation. Algae are important primary producers in widespread Everglades’ periphyton mats, but relationships of algal production and community structure to hydrologic variability are poorly understood. We quantified differences in algal biomass and community structure between periphyton mats in 5 short and 6 long-hydroperiod marshes in Everglades National Park (ENP) in October 2000. We related differences to water depth and total phosphorus (TP) concentration in the water, periphyton and soils. Long and short-hydroperiod marshes differed in water depth (73 cm vs. 13 cm), periphyton TP concentrations (172μg g⁻¹ vs. 107 μg g⁻¹, respectively) and soil TP (284 μg g⁻¹ vs. 145 μg g⁻¹). Periphyton was abundant in both marshes, with short-hydroperiod sites having greater biomass than long-hydroperiod sites (2936 vs. 575 grams ash-free dry mass m⁻²). A total of 156 algal taxa were identified and separated into diatom (68 species from 21 genera) and “soft algae” (88 non-diatom species from 47 genera) categories for further analyses. Although diatom total abundance was greater in long-hydroperiod mats, diatom species richness was significantly greater in short- hydroperiod periphyton mats (62 vs. 47 diatom taxa). Soft algal species richness was greater in long-hydroperiod sites (81 vs. 67 soft algae taxa). Relative abundances of individual taxa were significantly different among the two site types, with soft algal distributions being driven by water depth, and diatom distributions by water depth and TP concentration in the water and periphyton. Periphyton communities differ between short and long-hydroperiod marshes, but because they share many taxa, alterations in hydroperiod could rapidly promote the alternate community. Electronic supplementary material Electronic supplementary material is available for this article at and accessible for authorised users.     

Composition,size, and biomass of zooplankton in large productive Florida lakes

Crustacean zooplankton data were compiled from long-term observational studies at seven large shallow Florida lakes, to determine whether there are general characteristics in regard to species composition, body size, and biomass. In particular, we examined whether patterns in body size and species richness fit empirical models developed by Stanley Dodson. The lakes included range in size from 125 to 1730 km² and encompass mesotrophic to hyper-eutrophic conditions. We found that zooplankton biomass was strongly dominated by one species of calanoid copepod—Arctodiaptomus dorsalis. Large daphnids were absent, and Cladocera assemblages were dominated by small taxa such as Ceriodaphnia, Chydorus, and Eubosmina. The total number of species of pelagic cladocerans (8–12) was consistent with Dodson’s predictions based on lake area. The average size of crustacean zooplankton in Florida lakes is small in comparison with temperate communities. A. dorsalis is the smallest calanoid copepod in North America, and the mean length of Cladocera (0.6 mm) is consistent with Dodson’s results that size decreases from temperate to tropical zones. Total biomass of crustacean zooplankton was very low, ratios of zooplankton to phytoplankton biomass (0.01–0.1) are among the lowest reported in the literature, and the zooplankton displayed short-lasting early spring peaks in biomass. Cladocera were almost entirely absent in spring and summer. Factors known to occur in Florida lakes, which appear to explain these characteristics of biomass, include intense fish predation and high summer water temperature.