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1.
In this paper, we report our study on the minimised atomistic model (MAM) and the determination of an evolution path for dominant B m I n clusters during boron diffusion in kinetic Monte Carlo (KMC). It has been known that clusters generated after ion implantation play a decisive role in the enhanced boron diffusion at the tail region while being immobile at the peak region. Our MAM, based on the simple continuum model and the simple atomistic model, takes the smallest number of intermediate clusters into account as well as dominant clusters for the evolution path of interstitial clusters during boron diffusion. We find that intermediate clusters such as B2I3 and B3I3 play a significant role during the evolution of clusters despite the fact that the lifetimes of the corresponding intermediate clusters are relatively short due to low binding energies. Also, through our simulation results, we find the main evolution path of dominant clusters from B2I to B3I during thermal annealing in the MAM. Furthermore, our investigation reveals that the density of BI2 clusters increases at the beginning of the annealing process while the density of B3I increases at a later stage. KMC simulation results are compared with experimental SIMS data, which support our theoretical model.  相似文献   

2.
Calculations performed at the ab initio level using the recently reported planar concentric π-aromatic B18H6 2+(1) [Chen Q et al. (2011) Phys Chem Chem Phys 13:20620] as a building block suggest the possible existence of a new class of B3n H m polycyclic aromatic hydroboron (PAHB) clusters—B30H8(2), B39H9 2?(3), B42H10(4/5), B48H10(6), and B72H12(7)—which appear to be the inorganic analogs of the corresponding C n H m polycyclic aromatic hydrocarbon (PAHC) molecules naphthalene C10H8, phenalenyl anion C13H9 ?, phenanthrene/anthracene C14H10, pyrene C16H10, and coronene C24H12, respectively, in a universal atomic ratio of B:C?=?3:1. Detailed canonical molecular orbital (CMO), adaptive natural density partitioning (AdNDP), and electron localization function (ELF) analyses indicate that, as they are hydrogenated fragments of a boron snub sheet [Zope RR, Baruah T (2010) Chem Phys Lett 501:193], these PAHB clusters are aromatic in nature, and exhibit the formation of islands of both σ- and π-aromaticity. The predicted ionization potentials of PAHB neutrals and electron detachment energies of small PAHB monoanions should permit them to be characterized experimentally in the future. The results obtained in this work expand the domain of planar boron-based clusters to a region well beyond B20, and experimental syntheses of these snub B3n H m clusters through partial hydrogenation of the corresponding bare B3n may open up a new area of boron chemistry parallel to that of PAHCs in carbon chemistry.
Figure
Ab initio calculations predict the existence of polycyclic aromatic hydroboron clusters as fragments of a boron snub sheet; these clusters are analogs of polycyclic aromatic hydrocarbons  相似文献   

3.
We perform a systematical investigation on the geometry, thermodynamic/kinetic stability, and bonding nature of low-lying isomers of BnPt (n=1-6) at the CCSD(T)/[6-311+G(d)/LanL2DZ]//B3LYP/[6-311+G(d)/LanL2DZ] level. The most stable isomers of BnPt (n=1-6) adopt planar or quasi-planar structure. BnPt (n=2-5) clusters can be generated by capping a Pt atom on the B-B edge of pure boron clusters. However, For B6Pt with non-planar structure, a single doped Pt atom significantly affects the shape of the host boron cluster. The dopant of the Pt atom can improve the stability of pure boron clusters. The valence molecular orbital (VMO), electron localization function (ELF), and Mayer bond order (MBO) are applied to gain insight into the bonding nature of BnPt (n=2-6) isomers. The aromaticity for some isomers of BnPt (n=2-6) is analyzed and discussed in terms of VMO, ELF, adaptive natural density partitioning (AdNDP), and nucleus-independent chemical shift (NICS) analyses. Results obtained from the energy and cluster decomposition analyses demonstrate that B2Pt and B4Pt exhibits as highly stable. Importantly, some isomers of BnPt (n=2-5) are stable both thermodynamically and kinetically, which are observable in future experiment.  相似文献   

4.
The structures and stabilities of square–hexagon alternant boron nitrides (B x N x , x=12–36) vs their tube isomers containing octagons, decagons and dodecagons have been computed at the B3LYP density functional level of theory with the correlation-consistent cc-pVDZ basis set of Dunning. It is found that octagonal B20N20 and B24N24 tube structures are more stable than their square–hexagon alternants by 18.6 and 2.4 kcal mol−1, respectively, while the square–hexagon alternants of other cages are more stable. Trends in stability as a function of cluster size are discussed.Figure The octagonal B20N20 and B24N24 tube structures are more stable than their square-hexagon alternant cagesDedicated to Professor Dr. Paul von Ragué Schleyer on the occasion of his 75th birthday  相似文献   

5.
The ratio of the proteinase B inhibitors I1B and I2B from baker'sd yeast was shown to depend on the yeast strain by specific immunoprecipitation from boiled yeast extract and subsequent electrophoresis of the heat-dissociated precipitates on polyacrylamide gels. Both I1B and I2B were found, I2B being by far predominant. Saccharomyces carlsbergensis NCYC 74 contained I1B, whereas in Saccharomyces cerevisiae X 2180 only I2B was present. When cells of the latter strain were labelled with [14C] leucine from the beginning of growth and pulsed with [3H] leucine during the stationary phase, no short-lived I1B could be detected. However, the peak of I2B resolved on the gel showed an increased [3H/14C ration in comparison to the majority of the other cellular proteins. The increased 3H/14C ratio was found to be the result of catabolite repression of inhibitor synthesis during exponential growth: cells growing on glucose as carbon source contain high inhibitor levels only during the stationary phase of growth, whereas during growth on acetate high amounts of inhibitor are present even in exponentially growing cells. During the stationary phase of growth the inhibitor is degraded with the same half-life as the total cellular proteins (about 50 h).  相似文献   

6.
The structural properties, NMR and NQR parameters in the pristine and silicon carbide (SiC) doped boron phosphide nanotubes (BPNTs) were calculated using DFT methods (BLYP, B3LYP/6-31G*) in order to evaluate the influence of SiC-doped on the (4,4) armchair BPNTs. Nuclear magnetic resonance (NMR) parameters including isotropic (CSI) and anisotropic (CSA) chemical shielding parameters for the sites of various 13C, 29Si, 11B, and 31P atoms and quadrupole coupling constant (C Q ), and asymmetry parameter (η Q ) at the sites of various 11B nuclei were calculated in pristine and SiC- doped (4,4) armchair boron phosphide nanotubes models. The calculations indicated that doping of 11B and 31P atoms by C and Si atoms had a more significant influence on the calculated NMR and NQR parameters than did doping of the B and P atoms by Si and C atoms. In comparison with the pristine model, the SiC- doping in SiPCB model of the (4,4) armchair BPNTs reduces the energy gaps of the nanotubes and increases their electrical conductance. The NMR results showed that the B and P atoms which are directly bonded to the C atoms in the SiC-doped BPNTs have significant changes in the NMR parameters with respect to the B and P atoms which are directly bonded to the Si atoms in the SiC-doped BPNTs. The NQR results showed that in BPNTs, the B atoms at the edges of nanotubes play dominant roles in determining the electronic behaviors of BPNTs. Also, the NMR and NQR results detect that the Fig. 1b (SiPCB) model is a more reactive material than the pristine and the Fig. 1a (SiBCp) models of the (4,4) armchair BPNTs.  相似文献   

7.
We have studied the influence of hydrogenation on the relative stability of the low-lying isomers of the anionic B7 cluster, computationally. It is known that the pure-boron B7 cluster has a doubly (σ- and π-) aromatic C6v (3A1) quasi-planar wheel-type triplet global minimum (structure 1), a low-lying σ-aromatic and π-antiaromatic quasi-planar singlet C2v (1A1) isomer 2 (0.7 kcal mol−1 above the global minimum), and a planar doubly (σ- and π-) antiaromatic C2v (1A1) isomer 3 (7.8 kcal mol−1 above the global minimum). However, upon hydrogenation, an inversion in the stability of the species occurs. The planar B7H2 (C2v, 1A1) isomer 4, originated from the addition of two hydrogen atoms to the doubly antiaromatic B7 isomer 3, becomes the global minimum structure. The second most stable B7H2 isomer 5, originated from the quasi-planar triplet wheel isomer 1 of B7, was found to be 27 kcal mol−1 higher in energy. The inversion in stability occurs due to the loss of the doubly aromatic character in the wheel-type global minimum isomer (C6v, 3A1) of B7 upon H2−addition. In contrast, the planar isomer of B7 (C2v, 1A1) gains aromatic character upon addition of two hydrogen atoms, which makes it more stable. Figure The B7H2-global minimum structure and its σ-aromatic and π-antiaromatic MOs Dedicated to Professor Dr. Paul von Ragué Schleyer on the occasion of his 75th birthday.  相似文献   

8.
Crops specific proper concentration of micronutrient application is necessary to improve the yield and quality of crops. Therefore, an experiment was conducted to identify the optimum dose of boron for groundnut plant. Six level of boron (B) application, B0 (0?ppm), B1 (0.5?ppm), B2 (1?ppm), B3 (2?ppm), B4 (4?ppm) and B5 (8?ppm) were evaluated. Photosynthetic rate, transpiration and stomatal conductance were increased for boron application but leaf vapor pressure deficit decreased. Physiological growth parameters, yield and yield contributing character, and shelling percentage was highest for B3. The values of biochemical traits including protein, oil and vitamin E content were higher for B4. Thus, leaf gas exchange showed that boron can be used to culture groundnut as it provides high yield and biochemical properties.  相似文献   

9.
Boron clusters with silicon self-interstitials have been implicated in the phenomenon of transient enhanced diffusion (TED) following ion implantation of boron and subsequent annealing steps. This paper explores possible dissolution mechanisms for boron-interstitial clusters during the simulation of a typical annealing process. Using tight-binding molecular dynamics (TBMD) and employing a Goodwin-Skinner-Pettifor sp-based TB model, we have been able to observe the complete dissolution of a B 4 I 4 cluster into the surrounding crystalline silicon matrix. Many unsuccessful attempts to observe dissolution are also presented, highlighting the effect of cluster stability, temperature and the role of vacancies in cluster dissolution. Though we can make no unambiguous statements on the definitive dissolution mechanism of boron-defect clusters based on one successful dissolution event, we can hint at key events that appear to be important, such as the diffusion of self-interstitials (presciently predicted by Pelaz et al. ), the "stranding" of boron atoms in their wake, and the importance of mobile boron-self-interstitial (B-I) pairs. The intrinsic diffusivity of boron in a c-Si lattice and its retardation of the diffusivity of Si self-interstitials is also discussed.  相似文献   

10.
Boron application at proper concentration is necessary to enhance the leaf gas exchange, physiological growth, reproductive development and nutritional improvement of crops. Therefore, an experiment was conducted to study the effects of boron to evaluate the effect on the leaf gas exchange, reproductive development, physiological and nutritional changes of peanut. Treatments comprised six levels of boron (B), viz., B1 (0?ppm), B2 (0.5?ppm), B3 (1?ppm), B4 (2?ppm), B5 (4?ppm) and B6 (8?ppm). Results revealed that the vegetative growth, physiological growth parameters, leaf gas exchange, reproductive characters, peg strength, shelling (%) and nutritional elements were increased for boron application. Some vegetative, physiological and reproductive traits are positively correlated with each other. Thus, this finding showed that boron can be used to culture peanut as it provides high yield and nutritional properties.  相似文献   

11.
Abstract

The boron heterocyclic compound dipotassium-trioxohydroxytetrafluorotriborate (K2[B3O3F4OH]) was investigated as inhibitor of the zinc enzyme, carbonic anhydrase (CA, EC 4.2.1.1). Eleven human (h) CA isoforms, hCA I–IV, VA, VI, VII, IX and XII–XIV, were included in the investigations. The anion, similar to tetraborate or phenylboronic acid, inhibited most of them. hCA III was not inhibited by K2[B3O3F4OH], whereas hCA VA, hCA VI, hCA IX and hCA XIII were inhibited in the submillimolar range, with KIs of 0.31–0.63?mM. hCA I and II (cytosolic, widespread isoforms), hCA IV (membrane-bound isoform), hCA XII (tumor-associated, transmembrane) and hCA XIV (transmembrane) were much more effectively inhibited by this anion, with inhibition constants ranging from 25 to 93?µM. hCA VII, a cytosolic enzyme present in the brain and associated to oxidative stress, was very effectively inhibited by K2[B3O3F4OH], with a KI of 8.0?µM. We propose that K2[B3O3F4OH] binds to the metal ion from the enzyme active site, coordinating to the Zn(II) ion monodentately through its B-OH functionality. We hypothesize that some of the beneficial antitumor effects reported for K2[B3O3F4OH] may be due to the inhibition of CAs present in skin tumors.  相似文献   

12.
Maintenance of paroxysmal atrial fibrillation (AF) by fast rotors in the left atrium (LA) or at the pulmonary veins (PVs) is not fully understood. To gain insight into this dynamic and complex process, we studied the role of the heterogeneous distribution of transmembrane currents in the PVs and LA junction (PV-LAJ) in the localization of rotors in the PVs. We also investigated whether simple pacing protocols could be used to predict rotor drift in the PV-LAJ. Experimentally observed heterogeneities in IK1, IKs, IKr, Ito, and ICaL in the PV-LAJ were incorporated into two- and pseudo three-dimensional models of Courtemanche-Ramirez-Nattel-Kneller human atrial kinetics to simulate various conditions and investigate rotor drifting mechanisms. Spatial gradients in the currents resulted in shorter action potential duration, minimum diastolic potential that was less negative, and slower upstroke and conduction velocity for rotors in the PV region than in the LA. Rotors under such conditions drifted toward the PV and stabilized at the shortest action potential duration and less-excitable region, consistent with drift direction under intercellular coupling heterogeneities and regardless of the geometrical constraint in the PVs. Simulations with various IK1 gradient conditions and current-voltage relationships substantiated its major role in the rotor drift. In our 1:1 pacing protocol, we found that among various action potential properties, only the minimum diastolic potential gradient was a rate-independent predictor of rotor drift direction. Consistent with experimental and clinical AF studies, simulations in an electrophysiologically heterogeneous model of the PV-LAJ showed rotor attraction toward the PV. Our simulations suggest that IK1 heterogeneity is dominant compared to other currents in determining the drift direction through its impact on the excitability gradient. These results provide a believed novel framework for understanding the complex dynamics of rotors in AF.  相似文献   

13.
Reaction of [CpFe(CO)2I], 1 (Cp = η5-C5H5) and di(organyl)dichalcogenides, E2R2 (E = S, Se; R = Ph, CH2Ph, 2,6-(tBu)2-C6H2OH) with [LiBH4·thf] at −70 °C in toluene, followed by stirring at room temperature for 18 h yielded heteroferraboranes, [CpFe(CO)B2H4(μ-L)], 2-4 (2: L = SePh; 3: SeCH2Ph and 4: S(2,6-(tBu)2-C6H2OH). Compounds 2-4 are highly unstable and concurrent lose of boron atoms yielded organochalcogenolato-bridged complexes, [CpFe(CO)(μ-L)]2, 5-7, respectively (5: L = SePh; 6: SeCH2Ph and 7: S(2,6-(tBu)2-C6H2OH). In contrast, the reaction of 1 with di(2-furyl)ditelluride, (C4H3O)2Te2, yielded organotellurato-bridged complex, [CpFe(CO)(μ-TeC4H3O)]2, 8 and all of our attempts to isolate the boron precursor [CpFe(CO)B2H4(μ-TeC4H3O)] in pure form failed. The accuracy of these predictions in each case is established by IR, 1H, 11B, 13C, 77Se, 125Te NMR and mass spectrometry and complex 8 is further structurally confirmed by X-ray crystallography.  相似文献   

14.
We have extended an earlier study, in which we characterized in detail the electrostatic potentials on the inner and outer surfaces of a group of carbon and BxNx model nanotubes, to include several additional ones with smaller diameters plus a new category, C2xBxNx. The statistical features of the surface potentials are presented and analyzed for a total of 19 tubes as well as fullerene and a small model graphene. The potentials on the surfaces of the carbon systems are relatively weak and rather bland; they are much stronger and more variable for the BxNx and C2xBxNx. A qualitative correlation with free energies of solvation indicates that the latter two categories should have considerably greater water solubilities. The inner surfaces are generally more positive than the corresponding outer ones, while both positive and negative potentials are strengthened by increasing curvature. The outsides of BxNx tubes have characteristic patterns of alternating positive and negative regions, while the insides are strongly positive. In the closed C2xBxNx systems, half of the C–C bonds are double-bond-like and have negative potentials above them; the adjacent rows of boron and nitrogens show the usual BxNx pattern. When the C2xBxNx tubes are open, with hydrogens at the ends, the surface potentials are dominated by the B+–H and N–H+ linkages.Figure Calculated electrostatic potential on the molecular surface of closed (6,0) B48N48; a is an outside view, while b shows the interior. Color ranges, in kcal mol–1: red, greater than 20; yellow, between 20 and 0; green, between 0 and –10; blue, between –10 and –20; purple, more negative than –20  相似文献   

15.
Abstract  Sodium borocaptate (BSH) is widely used for boron neutron capture therapy (BNCT) of brain tumors. One drawback is the large uptake by the liver causing a decrease of its availability at the tumor region as well as bringing about toxicity problems. A novel carborane-based compound containing a boron payload very similar to that of BSH has been synthesized and tested on rat glioma (C6) cells, hepatoma tissue culture (HTC) cells, and hepatocytes. The newly synthesized system consists of an o-carborane unit (C2B10H11, o-CB) conjugated to a glutamine residue through a proper spacer, namely, o-CB-Gln. As compared with BSH, it showed the same uptake by C6 cells, but a 50% decrease in uptake by HTC cells and an 80% decrease in uptake by healthy hepatocytes. On this basis o-CB-Gln appears an interesting candidate for BNCT of brain tumors as it is expected to have a therapeutic index analogous to that of BSH accompanied by a much lower liver toxicity. Graphical Abstract  A novel carborane based compound, consisting in an o-carborane unit (C2B10H11, o-CB) conjugated to a glutamine residue through a proper spacer (namely o-CB-Gln) has been synthesized, characterized and tested on rat glioma (C6), hepatoma (HTC) and hepatocytes. As compared to sodium borocaptate (BSH), widely used for boron neutron capture therapy (BNCT) of brain tumors, the newly synthesized system showed the same uptake by C6 cells, but a 50% decrease by HTC and 80% decrease by healthy hepatocytes. On this basis o-CB-Gln appears an interesting candidate for BNCT of brain tumors as it is expected to have a therapeutic index analogous to BSH accompanied by a much lower liver toxicity.   相似文献   

16.
The fate of tumors induced by Rous sarcoma virus (RSV) was determined in anF 2 population segregating at three alloantigen loci. TheF 1 resulted from crossing tumor-resistant RPRL line 61 (B 2 B 2 D 3 D 3 I 2 I 2) with tumor-susceptible RPRL line 151 (B 5 B 5 D 4 D 4 I 8 I 8). Among theF 2 segregantsB 2 B 2,B 2 B 5, andB 5 B 5, the percentage of chicks dying of terminal tumors (by 70 days post-inoculation) was 5, 26, and 93, respectively (P0.01). NeitherD orI genotypes nor sex significantly affected tumor growth. In chickens with terminal tumors, the incidence of metastatic lesions was also significantly associated withB genotypes. Thus, the MHC chromosomal region in the chicken appears to exert a crucial role in determining the outcome of RSV-induced tumors.  相似文献   

17.
Cytochrome c oxidases (Ccoxs) are the terminal enzymes of the respiratory chain in mitochondria and most bacteria. These enzymes couple dioxygen (O2) reduction to the generation of a transmembrane electrochemical proton gradient. Despite decades of research and the availability of a large amount of structural and biochemical data available for the A-type Ccox family, little is known about the channel(s) used by O2 to travel from the solvent/membrane to the heme a3-CuB binuclear center (BNC). Moreover, the identification of all possible O2 channels as well as the atomic details of O2 diffusion is essential for the understanding of the working mechanisms of the A-type Ccox. In this work, we determined the O2 distribution within Ccox from Rhodobacter sphaeroides, in the fully reduced state, in order to identify and characterize all the putative O2 channels leading towards the BNC. For that, we use an integrated strategy combining atomistic molecular dynamics (MD) simulations (with and without explicit O2 molecules) and implicit ligand sampling (ILS) calculations. Based on the 3D free energy map for O2 inside Ccox, three channels were identified, all starting in the membrane hydrophobic region and connecting the surface of the protein to the BNC. One of these channels corresponds to the pathway inferred from the X-ray data available, whereas the other two are alternative routes for O2 to reach the BNC. Both alternative O2 channels start in the membrane spanning region and terminate close to Y288I. These channels are a combination of multiple transiently interconnected hydrophobic cavities, whose opening and closure is regulated by the thermal fluctuations of the lining residues. Furthermore, our results show that, in this Ccox, the most likely (energetically preferred) routes for O2 to reach the BNC are the alternative channels, rather than the X-ray inferred pathway.  相似文献   

18.
An externally-applied electric field can polarize a neuron, especially a neuron with elongated dendrites, and thus modify its excitability. Here we use a computational model to examine, predict, and explain these effects. We use a two-compartment Pinsky-Rinzel model neuron polarized by an electric potential difference imposed between its compartments, and we apply an injected ramp current. We vary three model parameters: the magnitude of the applied potential difference, the extracellular potassium concentration, and the rate of current injection. A study of the Time-To-First-Spike (TTFS) as a function of polarization leads to the identification of three regions of polarization strength that have different effects. In the weak region, the TTFS increases linearly with polarization. In the intermediate region, the TTFS increases either sub- or super-linearly, depending on the current injection rate and the extracellular potassium concentration. In the strong region, the TTFS decreases. Our results in the weak and strong region are consistent with experimental observations, and in the intermediate region, we predict novel effects that depend on experimentally-accessible parameters. We find that active channels in the dendrite play a key role in these effects. Our qualitative results were found to be robust over a wide range of inter-compartment conductances and the ratio of somatic to dendritic membrane areas. In addition, we discuss preliminary results where synaptic inputs replace the ramp injection protocol. The insights and conclusions were found to extend from our polarized PR model to a polarized PR model with I h dendritic currents. Finally, we discuss the degree to which our results may be generalized.  相似文献   

19.
A simple mathematical model has been derived, describing the irreversible inactivation of immature B cells by high doses of antigen during induction of tolerance, and the antigen-independent replacement of B cells by differentiation of their precursors. The latter leads to recovery from tolerance, the rate of which can be used to assess the rate of B cell replacement in experiments. The model has been compared with experimental tolerance to human albumin in newly hatched chickens.(1) It has been shown that this tolerance cannot be explained only by elimination of B cells but (2) the computed rate of B cell replacement agreed with the experimental rate assessed by immunization of tolerant chickens with a cross-reacting antigen. (3) In order to further verify the model, additional experiments to test the rate of B cell replacement were suggested by the model.  相似文献   

20.
N,N′-Dilithiated 1,1′-bis(trimethylsilylamino)ferrocene (2) reacts with boron halide adducts (HBBr2-SMe2; BF3-OEt2 and BBr3-SMe2), boron halides (BCl3, BBr3, BCl2(OPh) and BCl2(Ph)) and 1,1-bis(dimethylamino)dichlorodiborane(4) to give the corresponding 1,3-bis(trimethylsilyl)-1,3,2-diazabora-[3]ferrocenophanes (3)-(8) and the 2,3-bis(dimethylamino)-1,4-bis(trimethylsilyl)-1,4,2,3-diazadibora-[4]ferrocenophane (9). All new complexes were characterised by multinuclear magnetic resonance spectroscopy in solution, and the solid-state molecular structures of the hydride (3), fluoride, chloride (4, 5), and of the phenoxy and phenyl derivatives (7, 8) were determined by X-ray analysis.  相似文献   

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