珊瑚礁区的生物多样性及其生态功能

珊瑚礁区生物多样性程度可以与陆地热带雨林相提并论,目前关于珊瑚礁物种多样性及其空间分布特征方面研究进展迅速,是生物多样性研究的重要基地。作为一种生态资源,珊瑚礁还具有重要的生态功能,近年来由于全球气候逐渐变暖、人类活动影响不断加剧,导致其生物多样性缩减、生态功能严重退化。珊瑚礁生态系统多样性、遗传多样性已成为珊瑚礁研究热点,珊瑚礁生态环境效应和保护管理方面的研究也越来越受到重视。我国珊瑚礁主要分布在广阔的南海海域和海南岛、台湾岛、香港和广东广西沿岸,礁区生物种类繁多,多样性程度较高,以往研究主要涉及地质、地貌、生物、环境等方面,现今和今后一段时间里迫切需要加强生物多样性和生态功能研究,以确保更有效地保护和管理珊瑚礁。     

典型红树林生态系统藻类多样性及其在生态过程中的作用

藻类是红树林生态系统重要的生物类群, 根据生态习性可分为浮游植物、底栖微藻和大型藻类三个生态类群, 它们在红树林生态系统生物多样性、初级生产、元素循环等方面起着重要作用。但在红树林生态系统中, 关注重点多集中在红树植物和动物, 对其中的藻类重视不够, 且多数研究集中在近20年以及亚洲的红树林区。事实上, 红树林生态系统藻类非常丰富, 其多样性研究有助于深入揭示红树林生态系统的结构与功能。本文介绍了红树林生态系统藻类的组成类群及其重要性, 重点对红树林区浮游植物、底栖硅藻和大型海藻的种类组成、地理分布及其与初级生产力、水质污染、元素循环、碳库形成等生态过程中的作用的研究动态和进展等进行了总结。根据已有研究, 红树林区浮游植物和底栖硅藻的种类数一般为几十到上百种, 其中硅藻在种类和数量上都占绝对优势, 它们是重要的初级生产者、饵料生物和水质污染指示生物; 红树林区底栖大型藻类主要由红藻、绿藻、褐藻、蓝藻组成, 绿藻的种类较多, 红藻在数量上占优势; 藻类是红树林湿地碳库的重要贡献者, 在红树林湿地生态系统碳汇和碳循环中起重要作用。红树林生态系统是个高度动态和异质的系统, 今后应加强红树林藻类多样性的长周期、大尺度变化及不同生境藻类的综合研究, 关注大陆径流和潮汐对藻类多样性和蓝碳的影响, 借助沉积物藻类记录, 探明红树林区藻类的长周期变化, 反演气候变化和人类活动对红树林生态系统的影响过程和机制。     

红树林生态系统服务功能研究综述

红树林湿地是热带亚热带地区陆地生态系统向海洋生态系统过渡的重要生态系统,具有重要的生态环境服务功能。由于其特殊的生态功能和较高的经济、社会价值,近年来成为湿地生态学研究的热点。本文对红树林生态系统在生产有机物、维持热带亚热带河口生态系统、降低风速以及海水流速、防治和减轻灾难、截留碎屑形成陆地、保护海堤、吸附污染物净化水体、提供多种生境、维护生物多样性,以及形成优美的环境开展生态旅游等几个方面的生态服务功能进行了综述,旨在为红树林资源的保护与合理利用提供参考。同时指出,对红树林的上述生态服务功能的内在生态学过程与效应及其价值评估尚需要开展更深入的研究。     

深圳市景观生态安全格局源地综合识别

城市生态安全格局是景观生态学研究的热点和重点之一,识别源地是构建生态安全格局的首要环节.在总结已有研究中重要斑块识别方法的基础上,提出了结合景观连通性分析、生物多样性服务评估和生境质量评估来提取重要斑块的方法.以深圳市为研究区,采用基于图论的景观连通性指数、生物多样性服务当量、InVEST模型生境质量评估模块和GIS技术相结合的方法识别生态用地重要斑块.结果表明:深圳市生态斑块依照连通性、生物多样性和生境质量的综合评估分为五级,其中最重要斑块主要分布在龙岗区、盐田区和罗湖区;现行基本生态控制线政策可以保护大部分重要斑块.     

珊瑚礁生态修复研究进展

珊瑚礁生态系统有着很高的生物多样性和重要的生态功能。20世纪80年代以后全球范围内珊瑚礁的大面积退化引起了人们广泛的关注。简述了世界珊瑚礁资源现状,破坏原因,生态修复方法以及我国的珊瑚礁资源现状和修复策略等。国际上通用的生态修复策略主要是根据珊瑚的两种繁殖方式进行的,此外再配合人为的适度干扰,增加珊瑚的成活率。方法主要有：珊瑚移植、Gardening、人工渔礁、底质稳固、幼体附着等以及对相关利益者的宣传,海岸带的保护等。我国珊瑚礁退化严重,但是由于缺乏相关的科技资料报道和技术支持,缺乏系统的研究,使得珊瑚礁的生态修复成绩甚微,今后应在该领域开展更多的工作。     

亚龙湾珊瑚礁大型礁栖生物的群落结构及生态警示

鱼类和大型底栖生物等礁栖生物是珊瑚礁生态系统的重要组成部分,其群落信息是全面评价珊瑚礁生态系统健康状况的必要基础数据。基于录像样带法,分析了2018年12月底海南省三亚市亚龙湾珊瑚礁区17个站位礁栖鱼类和大型底栖生物的群落结构、数量分布及相似性,揭示了其中的生态警示,并提出相应的监管建议,旨在保护和恢复亚龙湾的珊瑚礁。结果表明:亚龙湾西岸及东排、西排共发现鱼类8科21属35种,以雀鲷科、隆头鱼科为主,平均密度为0.20尾·m^-2,金尾雀鲷、斑棘眶锯雀鲷和细鳞光鳃鱼为优势种;最近15年来,亚龙湾的鱼类资源持续衰退,目前已近于枯竭。另一方面,调查区的大型底栖生物以软珊瑚、大型底栖藻类、海百合和海胆为主,各类群的数量分布有所不同;造礁珊瑚的敌害生物小核果螺和长棘海星密度皆很低,目前尚不会对珊瑚礁构成威胁;整体而言,大型礁栖生物群落在亚龙湾西岸与东排、西排有较大的差异,间接反映出岛礁与岸礁环境存在差别,不过亚龙湾西岸湾口段的环境条件可能更接近岛礁;由于部分海区大型底栖藻类较多及可能存在的富营养化趋势,维持金尾雀鲷或其他植食性鱼类与藻类规模两者间的平衡,对恢复和保持亚龙湾珊瑚礁生态系统的健康尤为重要;同时,管控来自青梅河等的陆源污染,也是控制亚龙湾大型海藻增殖的关键;相比于海参,海百合对大型底栖藻类的依赖程度较低。调查区造礁珊瑚覆盖率与礁栖生物数量之间没有显著相关,可能与亚龙湾珊瑚礁退化严重及现存的种类以团块状造礁珊瑚为主,其构建的珊瑚礁生境空间异质性相对较低有关。为更好地保护亚龙湾的珊瑚礁,建议关注亚龙湾的水质,加强对捕鱼、潜水观光等旅游活动的监督管理,特别是应该立即实施长时间的渔业禁捕来恢复亚龙湾的渔业资源,并定期监控关键种群的数量变动。     

珊瑚礁生态系统中珊瑚藻的生态作用研究进展

珊瑚藻是海洋红藻中的大型钙化藻类,全球分布623种,中国现有记录共77种。随着生态科学研究的广泛展开,人们越来越认识到,珊瑚藻在海洋生态系统中,尤其在维持珊瑚礁生态系统的生物多样性及生态功能中发挥着重要作用。目前,科研人员对有关珊瑚藻的初级生产力、钙化作用以及在诱导底栖无脊椎动物幼虫的附着与变态等方面已有多方面的研究和探索。然而,有关珊瑚藻生态功能的深层次机理问题有待进一步深入研究。文章着重围绕目前珊瑚藻研究中的一些热点问题,从近年来珊瑚藻在珊瑚礁生态系统中的生态功能方面的研究概况进行综述,以期加深人们对珊瑚藻的认识,并促进对珊瑚藻生态功能的进一步深入研究。     

湖滨带退化生态系统的恢复与重建

湖滨带是水陆生态交错带的一种类型,在湖泊流域生态系统中发挥着重要作用,具有较高的生态、社会和经济价值.湖滨带的功能包括:缓冲带功能、保持生物多样性及生境保护功能、护岸功能和经济美学价值.湖滨带退化的原因主要是人为因素引起的生物群落结构的逆向演替及生态功能下降,退化湖滨带生态恢复与重建的理论基础是恢复生态学,其生态恢复技术可划分为三大类:湖滨带生境恢复与重建技术、湖滨带生物恢复与重建技术、湖滨带生态系统结构与功能恢复技术.云南洱海湖滨带近3年的生态恢复与重建试验的生态调查结果表明,试验区水生植被得到恢复,水质净化作用明显,藻类得到抑制,浮游动物的构成和数量发生变化,湖滨带湿地生态系统的生物多样性和稳定性增加.     

珊瑚礁生态系统病毒研究进展

病毒对珊瑚礁生态系统中的生物进化、生物地球化学循环、珊瑚疾病等方面具有重要的生态影响。随着珊瑚礁的全球性退化，病毒在珊瑚礁生态系统中的功能与危害日益显现。综述了珊瑚礁生态系统中病毒的研究现状与进展，包括：（1）珊瑚礁病毒的多样性与分布特征（水体、宿主、核心病毒组）；（2）珊瑚礁病毒的生态功能（感染方式、促进生物进化、生物地球化学循环）；（3）珊瑚礁病毒对全球气候变化的响应（热压力、珊瑚疾病）。总体而言，珊瑚礁生态系统具有极高的病毒多样性，所发现的60个科占已知所有病毒科数量的58%。珊瑚的核心病毒组主要由双链DNA病毒、单链DNA病毒、单链逆转录病毒所组成，珊瑚黏液层对病毒具有富集作用。"Piggyback-the-Winner"（依附-胜利）是病毒在珊瑚礁中主要的生物动力学模式，其可通过水平基因迁移的方式促进礁区生物进化。病毒可通过裂解细菌与浮游藻类的途径参与珊瑚礁的生物地球化学循环，尤其是碳循环与氮循环过程。此外，病毒还具有介导珊瑚热白化与直接引发珊瑚疾病的能力，这会影响珊瑚礁生态系统应对气候变化的适应性与恢复力。基于国际上的研究进展综述，结合南海珊瑚礁生态现状提出以下研究方向，以期促进我国珊瑚礁病毒学的发展：（1）开展南海珊瑚礁中病毒多样性的识别及其时-空分布特征研究；（2）探索病毒对南海珊瑚热白化、珊瑚疾病的介导作用及其与气候变化的关系；（3）揭示病毒对南海珊瑚礁生物地球化学循环的贡献。     

微生物在珊瑚礁生态系统中的作用与功能

珊瑚礁是由珊瑚、鱼类、底栖生物、藻类以及微生物等多种生命形式组成的聚集体,代表着一类典型的海洋生态系统.珊瑚礁存在于热带和亚热带的寡营养环境,拥有极高的初级生产力和生产效率,被誉为“海底热带雨林”.微生物在珊瑚礁生态系统的生物地球化学循环、物质转化以及健康维护上具有重要作用.随着分子生态学的发展,微生物在珊瑚中的作用和功能日益凸显.本文总结了微生物生态学的研究现状,包括珊瑚生态系统中微生物的定植方式,共生微生物的特性(专一性、可塑性、协同进化),共生微生物与珊瑚疾病的关系与信号调节,以及微生物应对全球变化(气温升高、海水酸化、富营养化)的响应.从“珊瑚 微生物”共生体的发生、共生微生物的特性与生态功能,以及全球环境变化下微生物的衍生效应来梳理最新理论与成果,明确珊瑚微生物生态学机制,为更好地保护珊瑚资源、维护海洋生物多样性提供理论借鉴.     

Altered sediment biota and lagoon habitat carbonate dynamics due to sea cucumber bioturbation in a high‐pCO2 environment

The effects of global change on biological systems and functioning are already measurable, but how ecological interactions are being altered is poorly understood. Ecosystem resilience is strengthened by ecological functionality, which depends on trophic interactions between key species and resilience generated through biogenic buffering. Climate‐driven alterations to coral reef metabolism, structural complexity and biodiversity are well documented, but the feedbacks between ocean change and trophic interactions of non‐coral invertebrates are understudied. Sea cucumbers, some of the largest benthic inhabitants of tropical lagoon systems, can influence diel changes in reef carbonate dynamics. Whether they have the potential to exacerbate or buffer ocean acidification over diel cycles depends on their relative production of total alkalinity (A_T) through the dissolution of ingested calcium carbonate (CaCO₃) sediments and release of dissolved inorganic carbon (C_T) through respiration and trophic interactions. In this study, the potential for the sea cucumber, Stichopus herrmanni, a bêche‐de‐mer (fished) species listed as vulnerable to extinction, to buffer the impacts of ocean acidification on reef carbonate chemistry was investigated in lagoon sediment mesocosms across diel cycles. Stichopus herrmanni directly reduced the abundance of meiofauna and benthic primary producers through its deposit‐feeding activity under present‐day and near‐future pCO₂. These changes in benthic community structure, as well as A_T (sediment dissolution) and C_T (respiration) production by S. herrmanni, played a significant role in modifying seawater carbonate dynamics night and day. This previously unappreciated role of tropical sea cucumbers, in support of ecosystem resilience in the face of global change, is an important consideration with respect to the bêche‐de‐mer trade to ensure sea cucumber populations are sustained in a future ocean.     

Reef coral diversity and global change

Regional anthropogenic processes such as pollution, dredging, and overfishing on coral reefs currently threaten the biodiversity of stony corals and other reef-associated organisms. Global climate change may interact with anthropogenic processes to create additional impacts on coral diversity in the near future. In order to predict these changes, it is necessary to understand the magnitude and causes of variation in scleractinian coral diversity throughout their 240 million year history. The fossil record documents long periods of speciation in corals, interrupted repeatedly by events of mass extinction. Some of these events relate clearly to changes in global climate. Diversity in reef corals has increased since their last period of extinction at the end of the Cretaceous (65 My bp ), and is still rising. During the last 8 million years, the fragmentation of the once pantropical Tethys Sea separated corals into two major biogeographical provinces. Periods of glaciation also have caused major changes in sea level and temperature. Accumulated evidence supports the theory that relative habitat area and changing patterns of oceanic circulation are mainly responsible for the two observed centres of recent coral diversity at the western tropical margins of the Atlantic and Pacific oceans. At predicted rates of climate change in the near future, coral reefs are likely to survive as an ecosystem. Increases in sea level may actually benefit corals and lead to regional increases in diversity if new habitat area on back reefs is opened to increased water circulation and thus coral dispersal. Rising temperature may cause higher rates of coral mortality and even local extinction in isolated, small populations such as those on oceanic islands. The effects of increases in ultraviolet radiation (UV) are largely unknown, but likely to be negative. UV may damage planktonic coral propagules in oceanic surface waters and thus decrease rates of gene flow between coral populations. This may result in increased local extinctions, again with the strongest impact on widely separated reefs with small coral populations. The largest threats to coral diversity are regional anthropogenic impacts, which may interact with global climate change to exacerbate rates of local species extinctions. Centres of high reef coral diversity coincide with human population centres in south-east Asia and the Caribbean, and thus the greatest potential for species loss lies in these geographical areas.     

Will increased storm disturbance affect the biodiversity of intertidal,nonscleractinian sessile fauna on coral reefs?

Relatively little is known about how the future effects of climatic change, including increases in sea level, temperature and storm severity and frequency, will impact on patterns of biodiversity on coral reefs, with the notable exception of recent work on corals and fish in tropical reef ecosystems. Sessile invertebrates such as ascidians, sponges and bryozoans occupying intertidal rubble habitats on coral reefs contribute significantly to the overall biodiversity and ecosystem function, but there is little or no information available on the likely impacts on these species from climate change. The existing strong physical gradients in these intertidal habitats will be exacerbated under predicted climatic change. By examining the distribution and abundance of nonscleractinian, sessile invertebrate assemblages exposed to different levels of wave action and at different heights on the shore around a coral reef, we show that coral reef intertidal biodiversity is particularly sensitive to physical disturbance. As physical disturbance regimes increase due to more intense storms and wave action associated with global warming, we can expect to see a corresponding decrease in the diversity of these cryptic sessile assemblages. This could impact negatively on the future health and productivity of coral reef ecosystems, given the ecosystem services these organisms provide.     

Habitat choice and recruitment of tropical fishes on temperate coasts of Japan

Tropical reef corals are expanding on Japanese temperate coasts in response to rising sea surface temperatures, and many tropical fish juveniles have been observed routinely in these coral habitats. The present study explored how offshore tropical fish larvae locate coral habitat on the temperate coasts of Japan. Settlement-stage larvae were sampled between July and October 2009–2011 with light traps anchored on coral-replete and coral-free habitats (rocky habitats) at two-level distance (distance between each habitat type was 6 km and 500 m, respectively). Larval abundance was significantly higher on the coral-dominated habitat than that on the rocky habitat at both short and long distance sites, suggesting that coral habitats attract offshore tropical fish larvae. In underwater visual survey, Chaetodontidae and Pomacentridae juveniles were more abundant in coral habitats than in rocky habitats at both the sites, and a laboratory habitat choice experiment demonstrated that these larvae showed a preference for corals rather than rocks. In contrast, densities of juvenile Mullidae did not differ between the coral and rocky habitats, and the larvae did not show a substrate preference in the habitat choice experiment. These observations suggest that habitat choice at settlement possibly accounts for the differences in settlement patterns of tropical fishes between the two habitats. Taken together, our results showed that most tropical fish larvae colonize their settlement coast at a scale of ~0.5 km, and that they may locate coral habitats after reaching a reef. Moreover, the results suggest that coral habitat expansion on temperate coasts will lead to an increase in coral-associated tropical fishes and will change assemblage structures of fishes on temperate coasts.     

Determining the Extent and Characterizing Coral Reef Habitats of the Northern Latitudes of the Florida Reef Tract (Martin County)

Climate change has recently been implicated in poleward shifts of many tropical species including corals; thus attention focused on higher-latitude coral communities is warranted to investigate possible range expansions and ecosystem shifts due to global warming. As the northern extension of the Florida Reef Tract (FRT), the third-largest barrier reef ecosystem in the world, southeast Florida (25–27° N latitude) is a prime region to study such effects. Most of the shallow-water FRT benthic habitats have been mapped, however minimal data and limited knowledge exist about the coral reef communities of its northernmost reaches off Martin County. First benthic habitat mapping was conducted using newly acquired high resolution LIDAR bathymetry and aerial photography where possible to map the spatial extent of coral reef habitats. Quantitative data were collected to characterize benthic cover and stony coral demographics and a comprehensive accuracy assessment was performed. The data were then analyzed in a habitat biogeography context to determine if a new coral reef ecosystem region designation was warranted. Of the 374 km² seafloor mapped, 95.2% was Sand, 4.1% was Coral Reef and Colonized Pavement, and 0.7% was Other Delineations. Map accuracy assessment yielded an overall accuracy of 94.9% once adjusted for known map marginal proportions. Cluster analysis of cross-shelf habitat type and widths indicated that the benthic habitats were different than those further south and warranted designation of a new coral reef ecosystem region. Unlike the FRT further south, coral communities were dominated by cold-water tolerant species and LIDAR morphology indicated no evidence of historic reef growth during warmer climates. Present-day hydrographic conditions may be inhibiting poleward expansion of coral communities along Florida. This study provides new information on the benthic community composition of the northern FRT, serving as a baseline for future community shift and range expansion investigations.     

Response of Pleistocene Coral Reefs to Environmental Change Over Long Temporal Scales

SYNOPSIS. TWO studies from the Pleistocene coral reef fossilrecord demonstrate the sensitivity of reef communities to bothlocal environmental parameters and habitat reduction. In thefirst study, Pleistocene reef coral assemblages from Papua NewGuinea show pronounced constancy in taxonomic composition andspecies diversity between 125 and 30 ka (thousand years). Spatialdifferences in reef coral community composition during successivehigh stands of sea level were greater among sites of the sameage than among reefs of different ages, even though global changesin sea level, atmospheric CO₂ concentration, tropical benthichabitat area, and temperature varied at each high sea levelstand. Thus, local environmental variation associated with runofffrom the land had greater influence on reef coral communitycomposition than variation in global climate and sea level.Proportional sampling from a regional species pool does notexplain the temporal persistence and local factors likely playeda major role. Examination of coral reef response to global changeshould not only involve regional diversity patterns but alsolocal ecological factors, and the interactive effects of localand global environmental change. In the second study, Pleistocene extinction of two widespread,strictly insular species of Caribbean reef corals, Pocilloporacf. palmata (Geister, 1975) and an organ-pipe growth form ofthe Montastraea "annularis" species complex, was natural anddid not involve gradual decrease in range and abundance, butwas sudden (thousands of years) throughout the entire range.One explanation is that sea level drop at the Last Glacial Maximum(LGM—18 ka) resulted in a threshold of habitat reduction,and caused disruption of coral metapopulation structure. Thresholdeffects predicted by metapopulation dynamics may also explainthe apparent paradox of the large amount of degraded modernreef habitat without any known modern-day reef coral extinctions.The rapid extinction of widespread Pleistocene species emphasizesthe vulnerability of reef corals in the face of present rapidenvironmental and climatic change.     

Spatial dynamics of benthic competition on coral reefs

The community structure of sedentary organisms is largely controlled by the outcome of direct competition for space. Understanding factors defining competitive outcomes among neighbors is thus critical for predicting large-scale changes, such as transitions to alternate states within coral reefs. Using a spatially explicit model, we explored the importance of variation in two spatial properties in benthic dynamics on coral reefs: (1) patterns of herbivory are spatially distinct between fishes and sea urchins and (2) there is wide variation in the areal extent into which different coral species can expand. We reveal that the size-specific, competitive asymmetry of corals versus fleshy algae highlights the significance of spatial patterning of herbivory and of coral growth. Spatial dynamics that alter the demographic importance of coral recruitment and maturation have profound effects on the emergent structure of the reef benthic community. Spatially constrained herbivory (as by sea urchins) is more effective than spatially unconstrained herbivory (as by many fish) at opening space for the time needed for corals to settle and to recruit to the adult population. Further, spatially unconstrained coral growth (as by many branching coral species) reduces the number of recruitment events needed to fill a habitat with coral relative to more spatially constrained growth (as by many massive species). Our model predicts that widespread mortality of branching corals (e.g., Acropora spp) and herbivorous sea urchins (particularly Diadema antillarum) in the Caribbean has greatly reduced the potential for restoration across the region.     

Acanthaster planci outbreak: decline in coral health, coral size structure modification and consequences for obligate decapod assemblages

Although benthic motile invertebrate communities encompass the vast majority of coral reef diversity, their response to habitat modification has been poorly studied. A variety of benthic species, particularly decapods, provide benefits to their coral host enabling them to cope with environmental stressors, and as a result benefit the overall diversity of coral-associated species. However, little is known about how invertebrate assemblages associated with corals will be affected by global perturbations, (either directly or indirectly via their coral host) or their consequences for ecosystem resilience. Analysis of a ten year dataset reveals that the greatest perturbation at Moorea over this time was an outbreak of the corallivorous sea star Acanthaster planci from 2006 to 2009 impacting habitat health, availability and size structure of Pocillopora spp. populations and highlights a positive relationship between coral head size and survival. We then present the results of a mensurative study in 2009 conducted at the end of the perturbation (A. planci outbreak) describing how coral-decapod communities change with percent coral mortality for a selected coral species, Pocillopora eydouxi. The loss of coral tissue as a consequence of A. planci consumption led to an increase in rarefied total species diversity, but caused drastic modifications in community composition driven by a shift from coral obligate to non-obligate decapod species. Our study highlights that larger corals left with live tissue in 2009, formed a restricted habitat where coral obligate decapods, including mutualists, could subsist. We conclude that the size structure of Pocillopora populations at the time of an A. planci outbreak may greatly condition the magnitude of coral mortality as well as the persistence of local populations of obligate decapods.