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1.
Host plant resistance is an important component for minimizing the losses due to the pod borer, Helicoverpa armigera, which is the most devastating pest of pigeonpea. An understanding of different morphological and biochemical components of resistance is essential for developing strategies to breed for resistance to insect pests. Therefore, we studied the morphological and biochemical components associated with expression of resistance to H. armigera in wild relatives of pigeonpea to identify accessions with a diverse combination of characteristics associated with resistance to this pest. Among the wild relatives, oviposition non-preference was an important component of resistance in Cajanus scarabaeoides, while heavy egg-laying was recorded on C. cajanifolius (ICPW 28) and Rhynchosia bracteata (ICPW 214). Accessions belonging to R. aurea, C. scarabaeoides, C. sericeus, C. acutifolius, and Flemingia bracteata showed high levels of resistance to H. armigera, while C. cajanifolius was as susceptible as the susceptible check, ICPL 87. Glandular trichomes (type A) on the calyxes and pods were associated with susceptibility to H. armigera, while the non-glandular trichomes (trichome type C and D) were associated with resistance to this insect. Expression of resistance to H. armigera was also associated with low amounts of sugars and high amounts of tannins and polyphenols. Accessions of wild relatives of pigeonpea with non-glandular trichomes (type C and D) or low densities of glandular trichomes (type A), and high amounts of polyphenols and tannins may be used in wide hybridization to develop pigeonpea cultivars with resistance to H. armigera. Handling editor: Robert Glinwood  相似文献   

2.
Abstract:  The noctuid pod borer, Helicoverpa armigera , is one of the most important pests of pigeonpea, and plant resistance is an important component for minimizing the extent of losses caused by this pest. To develop insect-resistant cultivars, it is important to understand the contributions of different components of resistance, and therefore, we studied the antixenosis mechanism of resistance to H. armigera in a diverse array of pigeonpea genotypes under no-choice, dual-choice, and multi-choice conditions. Antixenosis for oviposition was observed in case of ICPL 187-1, ICP 7203-1, ICPL 88039, T 21, ICPL 84060, and ICPL 332 under no-choice, dual-choice and multi-choice conditions. However, the number of eggs laid on ICPL 88039, T 21 and ICP 7203-1 did not differ significantly from those on ICPL 87 under dual-choice conditions. The susceptible check, ICPL 87 was highly preferred for oviposition. The genotypes ICP 7203-1, ICPL 187-1, T 21, ICPL 332, and ICPL 84060 can be used as sources of non-preference mechanism of resistance in pigeonpea improvement programs to breed for resistance to H. armigera .  相似文献   

3.
Several plant characters are known to affect the searching behaviour and parasitization efficiency of Trichogramma spp. (Hymenoptera: Trichogrammatidae). In this study, plant characters contributing to the low Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) egg parasitism levels on pigeonpea (Cajanus cajan (L.) Millspaugh) were investigated. The efficiency of T. chilonis on pigeonpea was dependent on the plant structure on which the host eggs were found. In a cage experiment, more than 55% of eggs placed on leaves were parasitized, while 1% of eggs on calyxes and no eggs on pods were parasitized. In a filter paper bioassay, parasitoids were deterred by acetone and hexane surface extracts from pigeonpea pods but showed no response to water extract. The searching behaviour of the parasitoids was not affected by different solvent extracts from the surface of pigeonpea leaves. In a four-armed airflow olfactometer, T. chilonis was repelled by volatiles from pigeonpea pods but showed no response to volatiles derived from hexane extract of pod surfaces. Volatile infochemicals and hexane surface extracts from pods of two wild Cajanus species, C. scarabaeoides (L.) Thours and C. platycarpus (Bentham) van der Maesen, were similarly deterrent to T. chilonis. The movement of the parasitoids on pigeonpea pods and calyxes was inhibited by long trichomes and wasps were trapped by sticky trichome exudates. Parasitoids walked significantly faster on leaves than on pods. The walking speed on both pods and leaves increased significantly after washing with hexane. The results presented in this paper show that the plant growth stage and the plant structures preferred by H. armigera for oviposition are the least suitable for T. chilonis, contributing to the low parasitoid efficiency on pigeonpea.  相似文献   

4.
Biological activity of the bacterium Bacillus thuringiensis Berliner (Bt) against insect pests is influenced by the host plants. To understand the underlying mechanism of variation in biological activity of Bt on host plants, we studied the effect of chemicals from the surface of chickpea (Cicer arietinum L., Fabaceae) leaves (ICCC 37 and ICC 506EB), sorghum [Sorghum bicolor (L.) Moench, Poaceae] grain (ICSV 745 and IS 18698), pigeon pea [Cajanus cajan (L.) Millsp., Fabaceae] pods (ICPL 87 and ICPL 332WR), and cotton (Gossypium hirsutum L., Malvaceae) squares (RCH 2 and Bt RCH 2), on which Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) feeds under natural conditions. Surface chemicals extracted in water from host plant leaves were added to the standard artificial diet containing a commercial formulation of Bt or Cry1Ac. Data were recorded on larval and pupal weights, pupation, adult emergence, larval and pupal periods, adult longevity, and fecundity. Weights of H. armigera at 5 days after initiation of the experiment were significantly reduced on artificial diets containing Bt + pod washings of ICPL 87 and ICPL 332WR, grain washings of ICSV 745, or square washings of RCH 2, and Cry1Ac + leaf‐surface washings of ICC 506EB. Pupal weights were lower on diets containing leaf‐surface washings of ICCC 37 + Bt than on standard artificial diet. Larval periods were prolonged on diets containing Bt + leaf‐surface washings of ICCC 37, pod washings of ICPL 87, and square washings of RCH 2, and on standard artificial diet + Cry1Ac. Pupation was significantly higher on standard artificial diet + Cry1Ac than on diets with Bt + grain washings of ICSV 745 and Cry1Ac + square washings of RCH 2 and Bt RCH 2. Adult emergence was lowest on diets with square washings of RCH 2 + Bt and grain washings of ICSV 745 + Cry1Ac. The results suggested that leaf‐surface washings play an important role in biological activity of Bt/Cry1Ac against H. armigera.  相似文献   

5.
The seeds of 36 pigeonpea [Cajanus cajan (L) Millsp.] cultivars, resistant and susceptible to pests and pathogens and 17 of its wild relatives were analysed for inhibitors of trypsin, chymotrypsin, and insect gut proteinases to identify potential inhibitors of insect (Helicoverpa armigera) gut enzymes. Proteinase inhibitors (PIs) of pigeonpea cultivars showed total inhibition of trypsin and chymotrypsin, and moderate inhibition potential towards H. armigera proteinases (HGP). PIs of wild relatives exhibited stronger inhibition of HGP, which was up to 87% by Rhynchosia PIs. Electrophoretic detection of HGPI proteins and inhibition of HGP isoforms by few pigeonpea wild relative PIs supported our enzyme inhibitor assay results. Present results indicate that PIs exhibit wide range of genetic diversity in the wild relatives of pigeonpea whereas pigeonpea cultivars (resistant as well as susceptible to pests and pathogens) are homogeneous. The potent HGPIs identified in this study need further exploration for their use in strengthening pigeonpea defence against H. armigera.  相似文献   

6.
Sterility mosaic disease (SMD), an important biotic constraint on pigeonpea (Cajanus cajan) in the Indian subcontinent, is caused by Pigeonpea sterility mosaic virus (PPSMV) transmitted by the eriophyid mite, Aceria cajani. Distinct PPSMV isolates occur in different geographical regions and broad‐based resistance to all these isolates is scarce in cultivated pigeonpea germplasm. Wild relatives of pigeonpea, which are known to possess resistance to several pests and diseases, were evaluated for broad‐based SMD resistance. One hundred and fifteen wild Cajanus accessions from six species (C. albicans, C. platycarpus, C. cajanifolius, C. lineatus, C. scarabaeoides and C. sericeus) were evaluated against three PPSMV isolates prevailing in peninsular India. Evaluations were done under greenhouse conditions in endemic locations of each isolate through mite‐mediated virus inoculation. Fifteen accessions showed resistance to all three isolates: ICP 15614, 15615, 15626, 15684, 15688, 15700, 15701, 15725, 15734, 15736, 15737, 15740, 15924, 15925 and 15926. Most of the wild accessions did not support mite multiplication. The majority of the accessions resistant to PPSMV following inoculations with viruliferous mites were susceptible by graft inoculation, suggesting that vector resistance is conferring resistance to infection with PPSMV. The 15 accessions identified as being resistant to infection to all three virus isolates tested are cross compatible with pigeonpea by traditional breeding. They are therefore useful for exploitation in breeding programmes to increase both the level of SMD resistance and to diversify its genetic base in the cultivated pigeonpea gene pool.  相似文献   

7.
Variations in the trypsin inhibitors and lectin content in the developing pods of thirty accessions of Cajanus scarabaeoides , a wild relative of pigeonpea, from wide geographical locations and six cultivated genotypes were estimated at juvenile, immature and mature stages of pod development. Genotypes differed at all three stages for these two biochemical components. Total protein and trypsin inhibitor contents were higher in the wild accessions than in the cultivated genotypes. Although lectin content in the juvenile stage of pod development in the wild accessions ICPW 138 and ICPW 98 was highest, it was absent in the mature pods in both the cultivated and the wild genotypes. Very high broad-sense heritability estimates indicated the possibility of involvement of few genes in the inheritance of these biochemical components, which could be easily introgressed into the elite agronomic background.  相似文献   

8.
Heterodera cajani is an important nematode pest of pigeonpea in India. Evaluation of 58 pigeonpea cultivars and 61 accessions of Cajanus acutifolius, C. cajanifolius, C. grandifolius, C. lanceolatus, C. lineatus, C. mollis, C. pla-tycarpus, C. reticulatus, C. scarabaeoides, C. sericeus, C. volubilis, Flemingia macrophylla, F. stricta, F. strobilifera, Rhynchosia aurea, R. bracteata, R. cana, R. densiflora, R. minima, R. rothii, R. suaveolens and R. sublobata revealed that the tested pigeonpea cultivars lacked resistance to H. cajani. Eight accessions of wild relatives were resistant and 20 accessions were moderately resistant. Based on the white cyst number on roots and low plant-to-plant variation, two accessions of C. scarabaeoides (ICPWs 111 and 128), three accessions of Flemingia spp. (ICPWs 194, 202 and 203), and one accession each of R. rothii (ICPW 257), R. densiflora (ICPW 224), and R. aurea (ICPW 210) were identified as resistant and promising for use in intergeneric hybridisation programmes.  相似文献   

9.
Rapid generation of superoxide radicals and accumulation of H2O2 is a characteristic early response of plants following perception of insect herbivory signals. Induction of oxidative burst on account of herbivory triggers various defense mechanisms in plants. Response of superoxide and H2O2-metabolizing enzymes and secondary metabolites in nine pigeonpea genotypes to Helicoverpa armigera feeding was investigated. Out of nine, four genotypes were found to be moderately resistant, three were intermediate and two were moderately susceptible. In general, H. armigera infestation resulted in increase in superoxide dismutase activity, H2O2 and phenolics content and decrease in catalase (CAT) activity in leaves, developing seeds and pod wall of pigeonpea genotypes. Peroxidase activity was found only in leaves. Among genotypes, the increase in phenolic constituents was found greater in moderately resistant genotypes than in moderately susceptible genotypes; this might determine their contribution in providing resistance to genotypes against H. armigera infestation. The capability of moderately resistant genotypes to maintain relatively lower H2O2 content and higher CAT activity in pod wall and developing seeds also appeared to determine resistance of genotypes towards H. armigera. Expression of resistance to H. armigera was found to be associated with a negative correlation of H2O2-metabolizing enzymes and phenolics with pod damage as well as with negative association between CAT activity and H2O2 content. A positive correlation found between H2O2 content and pod damage suggested the accumulation of H2O2 in response to pod borer attack. In addition, correlation analysis also revealed a positive association between CAT, phenolic compounds and DPPH radical scavenging activity following pod borer attack; this indicated their contribution in resistance mechanisms against H. armigera herbivory.  相似文献   

10.
A field assessment of 26 accessions of Vicia narbonensis and three of V. johannis confirmed previous laboratory studies demonstrating higher levels of resistance to Aphis fabae in these two wild species compared to the closely related crop, Vicia faba. Accessions of V. johannis were significantly more resistant than most accessions of V. narbonensis for all resistance indices measured except survival of aphid nymphs. Plant growth stage significantly affected levels of resistance in both Vicia species, resistance being moderate at pre-bud stage, decreasing on flowering and rising again at pod fill and onset of leaf senescence. Significant intraspecific variability in aphid resistance was found only within the 26 accessions of V. narbonensis, var. serratifolia being more resistant than var. narbonensis. Possible resistance factors and the agronomic potential of these two wild relatives of Faba bean are considered.  相似文献   

11.
Single feature polymorphisms (SFPs) are microarray-based molecular markers that are detected by hybridization of DNA or cRNA to oligonucleotide probes. With an objective to identify the potential polymorphic markers for drought tolerance in pigeonpea [Cajanus cajan (L.) Millspaugh], an important legume crop for the semi-arid tropics but deficient in genomic resources, Affymetrix Genome Arrays of soybean (Glycine max), a closely related species of pigeonpea were used on cRNA of six parental genotypes of three mapping populations of pigeonpea segregating for agronomic traits like drought tolerance and pod borer (Helicoverpa armigiera) resistance. By using robustified projection pursuit method on 15 pair-wise comparisons for the six parental genotypes, 5,692 SFPs were identified. Number of SFPs varied from 780 (ICPL 8755 × ICPL 227) to 854 (ICPL 151 × ICPL 87) per parental combination of the mapping populations. Randomly selected 179 SFPs were used for validation by Sanger sequencing and good quality sequence data were obtained for 99 genes of which 75 genes showed sequence polymorphisms. While associating the sequence polymorphisms with SFPs detected, true positives were observed for 52.6% SFPs detected. In terms of parental combinations of the mapping populations, occurrence of true positives was 34.48% for ICPL 151 × ICPL 87, 41.86% for ICPL 8755 × ICPL 227, and 81.58% for ICP 28 × ICPW 94. In addition, a set of 139 candidate genes that may be associated with drought tolerance has been identified based on gene ontology analysis of the homologous pigeonpea genes to the soybean genes that detected SFPs between the parents of the mapping populations segregating for drought tolerance.  相似文献   

12.
A study of the fruits of modern members of the Vicieae (vetch tribe) has been undertaken to seek morphological, micromorphological and anatomical criteria which may assist in the identification of the archaeological remains of pods and in particular ones that may be useful for the diagnosis of their wild or domesticated status. The study included wild and domesticated Pisum (peas), Lens (lentils) and Vicia (common vetch) and some of their wild relatives found in the Old World. The results show that the micromorphological features of the pod surface tend to be highly variable, and do not distinguish the taxa. Most importantly, the pods of less-developed domesticated taxa show no reduction in the number of fibrous layers in the pod wall compared with those of their closest wild relatives, and no morphological or anatomical evidence has been found to indicate the dehiscent or indehiscent status of a pod. This appears to challenge some of our accepted wisdom on the mechanics of legume dehiscence. Received August 8, 2001 / Accepted January 15, 2002  相似文献   

13.
Cajanus platycarpus, a wild relative of Cajanus cajan, is an important source for various agronomically desirable traits, including resistance towards pod borer, Helicoverpa armigera. In the present study, the inhibitory activity of proteinase inhibitors (PIs) present in crude protein extracted from different accessions of C. platycarpus and cultivars of C. cajan was evaluated against H. armigera under in vitro and in vivo conditions. The PIs active against H. armigera gut trypsin-like proteinases (HGPs), referred to as ‘HGPIs’, were more pronounced in mature dry seeds of C. platycarpus accessions when compared with cultivars, which is also evident through gelatin activity staining studies. Therefore, the inhibitory activity of HGPIs was further evaluated in various plant organs of C. platycarpus accessions, such as leaves, flowers, pods, developing seeds at 8–10 days (DAP-I), 18–20 days (DAP-II), and 28–32 days after pollination (DAP-III). However, the HGPI activity was more pronounced in mature dry seeds > DAP-III > DAP-II > DAP-I > flowers > pods > leaves. The observed quantitative allocation of HGPIs closely resembled “Optimal Defense Theory”. Further, bioassays demonstrated that there was a significant reduction in the body weight of the larvae fed upon crude PI extracts of C. platycarpus accessions with concomitant increase in mortality rate and the formation of larval–pupal intermediates. Nevertheless, such changes were not observed when the larvae were fed on crude PI extracts of C. cajan cultivars. These results suggest that the PI gene(s) from C. platycarpus accessions could be exploited in the management of H. armigera by introgression into C. cajan cultivars.  相似文献   

14.
Abstract

Helicoverpa armigera, a serious global destructive pest of agricultural crops, is on continuous rise despite several control measures undertaken. The detrimental effects of these measures have created a dire need to explore alternate eco-safe strategies. The present study investigates the growth-regulatory and growth-arrest potential of hexane and methanol extracts of Thevetia neriifolia stems against H. armigera. Investigations revealed that larval feeding and rearing on the extract-containing diet did not result in appreciable larval mortality but delayed the larval growth and development. Both the extracts demonstrated dose-dependent effects exhibiting negative correlation between the weights gained by developmental stages and the extract concentrations. Feeding with extracts also resulted in formation of few larval–pupal and pupal–adult intermediates and significantly reduced percent adult emergence of H. armigera. Current study, however, revealed higher growth inhibitory potential of methanol extracts as compared with hexane extracts. The study attempts to provide an eco-friendly approach for H. armigera management.  相似文献   

15.
Heterodera cajani is an important nematode pest of pigeonpea in India and a simple and reliable greenhouse procedure has been developed to screen pigeonpea genotypes for resistance to it. In pot experiments, white cysts of H. cajani were counted on the roots of the susceptible genotype ICPL 87 at 15, 30 and 45 days after seedling emergence in soils infested with different levels of H. cajani. The seedlings were rated for the number of white cysts per root system on a one (highly resistant, no cysts) to nine (highly susceptible, more than 30 cysts) scale. White cysts were not easy to see on wet roots but were clearly visible on slightly dried roots. Cyst counts and ratings were more uniform when roots of 30 day old seedlings were evaluated than when 15 or 45 day old seedlings were examined. Effects of different H. cajani infestation levels on the ratings were not significant although the use of higher inoculum densities (16 to 27 eggs and juveniles/cm3 soil) was effective in reducing variability. This procedure was used to screen 60 pigeonpea genotypes and all of them were rated seven or nine. Ten accessions of Atylosia spp. and Rhynchosia spp. were rated three.  相似文献   

16.
Experiments were conducted to observe the feeding and food selection-behaviour of different instars of the pod-borer Helicoverpa armigera (Hübner) in response to choices between the cultivated and a wild species of Cajanus. First and second instars fed upon a cultivated variety of Cajanus cajan in preference to a wild species, C. scarabaeoides and on flowers of C. cajan, rather than pods or leaves of C. cajan. First and second instars preferred pods of C. scarabaeoides with trichomes removed to pods with trichomes present. All instars fed upon pods of C. cajan rather than those of C. scarabaeoides. Solvent extraction of the pod surfaces affected the feeding of larvae, in some instances. They preferred the unextracted pods of C. cajan; the extracted pod of C. scarabaeoides (first and second instars) or the unextracted pod of C. scarabaeoides (fourth and fifth instars). Glass-fibre disc bioassays showed that the methanol, hexane and water extracts from the pod-surface of C. cajan stimulated the feeding of fifth instars. The experiments have shown that characteristics of C. cajan, such as either the compounds present or the type and distribution of trichomes on the plant surfaces, can determine the susceptibility of C. cajan to pod-borer larvae.  相似文献   

17.
The gram pod borer, Helicoverpa armigera, is one of the most important constraints to chickpea production. High acidity of chickpea exudates is associated with resistance to pod borer, H. armigera; however, acidic exudates in chickpea might influence the biological activity of the bacterium, Bacillus thuringiensis (Bt), applied as a foliar spray or deployed in transgenic plants for controlling H. armigera. Therefore, studies were undertaken to evaluate the biological activity of Bt towards H. armigera on chickpea genotypes with different amounts of organic acids. Significantly lower leaf feeding, larval survival and larval weights were observed on ICC 506EB, followed by C 235, and ICCV 10 across Bt concentrations. Leaf feeding by the larvae and larval survival and weights decreased with an increase in Bt concentration. However, rate of decrease in leaf feeding and larval survival and weights with an increase in Bt concentration was greater on L 550 and ICCV 10 than on the resistant check, ICC 506EB, suggesting that factors in the resistant genotypes, particularly the acid exudates, resulted in lower levels of biological activity of Bt possibly because of antifeedant effects of the acid exudates. Antifeedant effects of acid exudates reduced food consumption and hence might reduce the efficacy of Bt sprays on insect‐resistant chickpea genotypes or Bt‐transgenic chickpeas, although the combined effect of plant resistance based on organic acids, and Bt had a greater effect on survival and development of H. armigera than Bt alone.  相似文献   

18.
Understanding the distribution of genetic diversity among individuals, populations and gene pools is crucial for the efficient management of germplasm collections and breeding programs. Diversity analysis is routinely carried out using sequencing of selected gene(s) or molecular marker technologies. Here we report on the development of Diversity Arrays Technology (DArT) for pigeonpea (Cajanus cajan) and its wild relatives. DArT tests thousands of genomic loci for polymorphism and provides the binary scores for hundreds of markers in a single hybridization-based assay. We tested eight complexity reduction methods using various combinations of restriction enzymes and selected PstI/HaeIII genomic representation with the largest frequency of polymorphic clones (19.8%) to produce genotyping arrays. The performance of the PstI/HaeIII array was evaluated by typing 96 accessions representing nearly 20 species of Cajanus. A total of nearly 700 markers were identified with the average call rate of 96.0% and the scoring reproducibility of 99.7%. DArT markers revealed genetic relationships among the accessions consistent with the available information and systematic classification. Most of the diversity was among the wild relatives of pigeonpea or between the wild species and the cultivated C. cajan. Only 64 markers were polymorphic among the cultivated accessions. Such narrow genetic base is likely to represent a serious impediment to breeding progress in pigeonpea. Our study shows that DArT can be effectively applied in molecular systematics and biodiversity studies.Electronic Supplementary Material Supplementary material is available to authorised users in the online version of this article at .  相似文献   

19.
Trichogramma spp. (Hymenoptera: Trichogrammatidae) only rarely parasitize eggs of Helicoverpa armigera (Hübner) (Lepidoptera: Noctuidae) on pigeonpea (Cajanus cajan (L.) Millspaugh), while on other plants including sorghum (Sorghum bicolor (L.)) high parasitism levels of this host are found. In this study two strategies designed to increase the parasitoid activity on pigeonpea were tested in the field: intercropping pigeonpea with sorghum and mass-releasing T. chilonis Ishii. Neither strategy led to an increase in parasitism. On pigeonpea, H. armigera oviposited >74.8% of its eggs on calyxes and pods. Parasitism levels in host eggs collected from different plant structures varied significantly with 3.6, 0.3, and 40.7% of eggs on calyxes, pods, and leaves parasitized. Earlier studies have shown that calyxes and pods possess long glandular and non-glandular trichomes, and are covered by sticky trichome exudates which inhibit parasitoid searching behaviour. Parasitism levels between 27.9 and 100% were recorded from host eggs on the intercropped sorghum. Trichogramma chilonis was the dominant parasitoid species. The mean clutch size was 2.03, but up to six parasitoids emerged per egg. Progeny sex ratio (% females) decreased with clutch size, from 63.1% at a clutch size of one to 46.0% at a clutch size of five. Sticky trap catches showed that while the parasitoid population in sorghum increased when H. armigera started ovipositing, the population within pigeonpea did not benefit from either a high parasitoid population in sorghum or a high host egg density on pigeonpea. During one of five seasons studied, however, high parasitism levels (up to 73%) were recorded on pigeonpea. During this season, H. armigera oviposited on pigeonpea plants in the vegetative growth stage and a high proportion of eggs were collected from leaves. Parasitism levels were positively correlated with the percentage of eggs collected from leaves. This study shows that the parasitization efficiency of Trichogramma spp. on pigeonpea depends mainly on the location of the host eggs. This explains why parasitism levels of H. armigera eggs on pigeonpea did not increase when intercropped with sorghum or after mass-releasing T. chilonis.  相似文献   

20.
To map resistance genes for Fusarium wilt (FW) and sterility mosaic disease (SMD) in pigeonpea, sequencing‐based bulked segregant analysis (Seq‐BSA) was used. Resistant (R) and susceptible (S) bulks from the extreme recombinant inbred lines of ICPL 20096 × ICPL 332 were sequenced. Subsequently, SNP index was calculated between R‐ and S‐bulks with the help of draft genome sequence and reference‐guided assembly of ICPL 20096 (resistant parent). Seq‐BSA has provided seven candidate SNPs for FW and SMD resistance in pigeonpea. In parallel, four additional genotypes were re‐sequenced and their combined analysis with R‐ and S‐bulks has provided a total of 8362 nonsynonymous (ns) SNPs. Of 8362 nsSNPs, 60 were found within the 2‐Mb flanking regions of seven candidate SNPs identified through Seq‐BSA. Haplotype analysis narrowed down to eight nsSNPs in seven genes. These eight nsSNPs were further validated by re‐sequencing 11 genotypes that are resistant and susceptible to FW and SMD. This analysis revealed association of four candidate nsSNPs in four genes with FW resistance and four candidate nsSNPs in three genes with SMD resistance. Further, In silico protein analysis and expression profiling identified two most promising candidate genes namely C.cajan_01839 for SMD resistance and C.cajan_03203 for FW resistance. Identified candidate genomic regions/SNPs will be useful for genomics‐assisted breeding in pigeonpea.  相似文献   

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