秦岭大熊猫栖息地巴山木竹生物量

巴山木竹是秦岭大熊猫冬、春季食物的主要来源,其生长状况、数量和空间分布格局与大熊猫的生存与活动有着密切的关系。为了探讨不同立地因子对巴山木竹生物量的影响,确定巴山木竹生长的主导因子和适宜立地条件,在秦岭大熊猫栖息地内选取54块样地,对不同立地条件下巴山木竹生物量进行了测定。通过统计分析,结果表明:由于不同地区气候和土壤条件的差异,导致了巴山木竹生物量亦存在较大差别;巴山木竹生物量在其分布区内随海拔的升高而呈规律性变化,1500—1700 m为最适分布区域,其生物量最大;坡度越大生物量越小,陡坡不适宜竹林的生长;上坡位不利于竹林生长,而中、下坡位生物量没有显著差异;坡向对生物量的影响不明显,均适宜巴山木竹生长;在落叶阔叶和针阔混交林中,当林冠郁闭度>0.6时,竹林生长减弱。在这些立地因子中,影响巴山木竹生物量积累的主导因子是坡位和林冠郁闭度。     

巴山木竹发笋和大熊猫取食的时空格局及相关性分析

巴山木竹(Bashania fargesii)是秦岭大熊猫冬季和春季主要食物来源。秦岭地区巴山木竹的更新是保护大熊猫和评价其生境质量的一个重要因子, 而发笋是巴山木竹更新的主要方式。揭示巴山木竹发笋和大熊猫取食的时空格局以及二者空间和数量上的相关性对保护和恢复大熊猫栖息地具有重要意义。运用单变量和双变量Ripley K函数点格局方法, 对秦岭南坡佛坪国家级自然保护区40×40 m永久样地竹子发笋和大熊猫取食情况连续6年(2002–2008年, 2007年除外)研究表明, 由于自身克隆生长、资源异质性、大熊猫取食和践踏等因素, 巴山木竹发笋呈现聚集分布格局; 而大熊猫取食的聚集格局可能归因于食物聚集分布、自身取食习惯和取食地段小地形特征。大熊猫取食和巴山木竹发笋空间上呈现正相关, 显示出巴山木竹为秦岭大熊猫食物主要来源。同时, 线性回归结果显示, 大熊猫取食强度与巴山木竹发笋产量之间相关性不显著, 说明该地区还存在其他竹子提供食物来源, 大熊猫对巴山木竹不是完全依赖。     

秦岭大熊猫冬春季节对巴山木竹竹林生长指标的选择

2004~2005年冬季的12月、1月和春季的4月、5月,在秦岭山系南坡佛坪自然保护区内就大熊猫对构成其主要栖息地和食物来源的巴山木竹竹林的选择进行研究后的结果表明:在冬季,大熊猫栖息地多为幼竹与死竹比例基本持平、密度稳定的巴山木竹竹林,主要取食老竹;在春季,大熊猫更偏好选择竹子密度和盖度略低、竹子粗壮高大、幼竹与竹笋比例高的竹林活动,主要取食幼竹。大熊猫春季栖息地幼竹比例通常高过死竹比例,竹林密度处于增长期。竹林进入发笋期后,稀疏、高大的竹林下的粗大竹笋成为大熊猫的主要食物来源。     

秦岭大熊猫冬春季节对巴山木竹竹林生长指标的选择

2004～2005年冬季的12月、1月和春季的4月、5月，在秦岭山系南坡佛坪自然保护区内就大熊猫对构成其主要栖息地和食物来源的巴山木竹竹林的选择进行研究后的结果表明：在冬季，大熊猫栖息地多为幼竹与死竹比例基本持平、密度稳定的巴山木竹竹林，主要取食老竹；在春季，大熊猫更偏好选择竹子密度和盖度略低、竹子粗壮高大、幼竹与竹笋比例高的竹林活动，主要取食幼竹。大熊猫春季栖息地幼竹比例通常高过死竹比例，竹林密度处于增长期。竹林进入发笋期后，稀疏、高大的竹林下的粗大竹笋成为大熊猫的主要食物来源。     

秦岭巴山木竹微量元素及营养成分分析

竹子是大熊猫(Ailuropoda melanoleuca)的主要食物(胡锦矗等,1985;胡锦矗,2001).巴山木竹(Bashania fargesii)分布广,是秦岭大熊猫主食竹种之一(田星群和刘其建,1985).该竹在秦岭的分布具有明显的水平和垂直地带性,分布中心正好和该山系大熊猫分布中心相吻合(田星群和刘其建,1985).秦岭大熊猫有长达8个月的时间在巴山木竹林中觅食(潘文石等,1988).为揭示食物营养成分对大熊猫觅食行为的影响,深入认识该物种适应竹子这种低营养价值食物的觅食对策,本文以采自陕西省佛坪国家级自然保护区的222份巴山木竹样品为研究对象,分析了7种微量元素及2种营养物质在不同季节、年龄及生长部位的含量,以促进对野生大熊猫生态习性的深入了解,亦能为罔养大熊猫的人工饲养繁殖提供参考.     

基于红外相机技术对佛坪国家级自然保护区 大熊猫季节性空间分布与活动模式的研究

2015年1月至2017年12月,在陕西佛坪国家级自然保护区海拔1 200~2 500 m的57条大熊猫(Ailuropodamelanoleuca)活动频繁的巡护样线上,布设130台红外相机。累计红外相机有效工作日100 685 d,共拍摄到大熊猫有效独立照片1 831张。将红外相机拍摄的有效照片和相机工作日依据不同竹种类型及保护站归类,对大熊猫季节性空间分布与活动模式进行研究。结果表明:(1)大熊猫春季活动最为频繁,在巴山木竹(Bashania fargesii)林和秦岭箭竹(Fargesia qinlingensis)林中相对多度分别是2.89和3.72;其次是冬季,在巴山木竹林和秦岭箭竹林中的相对多度分别是2.95和2.74。3月份是其活动高峰,巴山木竹林和秦岭箭竹林中的相对多度指数都是最高;11、12和1月份,大熊猫在巴山木竹林中相对多度指数高于秦岭箭竹林;2至10月份,大熊猫在秦岭箭竹林中的相对多度指数都要高于巴山木竹林。(2)大熊猫在佛坪保护区各个保护站均有分布,且存在季节性空间分布差异。三官庙和西河保护站全年的12个月都能够捕获到大熊猫的身影,是大熊猫分布相对多度最高的两个区域,大古坪、岳坝和龙潭子3个保护站海拔较低,大熊猫主要集中在冬春季节活动;凉风垭保护站海拔较高,主要分布的是秦岭箭竹林,大熊猫主要在夏季活动。(3)干扰活动主要包括采集、放牧、旅游、家犬活动和监测5种类型。干扰活动类型在各个保护站存在差异,且多为零星干扰,对大熊猫的活动和分布存在一定影响。本研究较为全面地调查了佛坪国家级自然保护区大熊猫季节性活动动态和区域性分布状况,调查结果可为后期的保护管理提供有效的参考依据。     

佛坪国家级自然保护区秦岭箭竹克隆结构的SSR分析

利用SSR分子标记技术分析了佛坪国家级自然保护区秦岭箭竹(Fargesia qinlingensis)的克隆多样性和克隆结构,以探讨小尺度范围内秦岭箭竹自然居群遗传变异的分布特征,对该种开花特性、高山地区生态环境维护和大熊猫的保护提供重要依据。结果表明7对SSR引物共扩增出79个位点,其中多态性位点77个,多态位点百分率(PPB)为97.47%。秦岭箭竹的142个分株共形成107个克隆,最大克隆可达5 m。克隆多样性略高于其他克隆植物的平均值(D=0.62,G/N=0.17,E=0.68),基因型比率(G/N)、Simpson指数(D)、平均克隆大小(N/G)和Fager均匀性指数(E)分别为0.7535、0.9680、1.3271和0.5109。克隆空间结构分析表明秦岭箭竹的克隆构型为密集型,各克隆呈镶嵌性分布,同一克隆的分株排列紧密。克隆聚类分析表明各克隆之间聚类不明显,总体上来自同一样地的克隆被聚为一类。空间自相关分析显示在空间距离为36 m范围内,分株比基株有更显著的空间遗传结构,空间自相关系数r的取值范围分别为0.084—0.626和0.024—0.288,说明克隆繁殖在一定程度上限制了空间遗传结构的范围。样地内秦岭箭竹个体在空间距离小于44 m时存在显著的正相关空间结构,特别是在4 m处表现出最大的空间自相关系数(r=0.626),表明空间距离相距4 m内的个体最有可能属于同一克隆,4 m比5 m更能表现出清晰的克隆结构,X-轴截距为52.280,代表了秦岭箭竹不规则克隆的平均最小长度。秦岭箭竹的克隆多样性和克隆结构与初始苗补充、花粉散播方式和微环境差异有关。     

珠芽蓼种群克隆多样性及克隆结构的初步研究

珠芽蓼(Polygonum viviparum)是青藏高原东缘广泛分布的克隆植物,具有有性和无性(根状茎和珠芽)两种生殖方式。该研究采用RAPD技术对分布于不同海拔的珠芽蓼7个自然种群进行了克隆结构和克隆多样性(是单克隆种群还是多克隆种群)以及克隆多样性与海拔因子之间的相关性研究,为了解高山克隆植物对环境的适应性策略及揭示克隆植物的繁殖和分布特点提供科学依据。研究结果表明:1)采用13条RAPD引物对珠芽蓼7个种群共140个样本进行扩增分析,共扩增到117个位点,其中多态性位点84个,多态位点百分率PPL达到71.79%,检测到43个基因型,且全部为局限型基因型;2)与Ellstrand和Roose(1987)总结的克隆植物的克隆多样性平均值相比(PD=0.17,D=0.62),珠芽蓼种群克隆多样性水平稍高,Simpson指数平均为0.639,基因型比率PD平均为0.307;3)克隆结构分析表明,珠芽蓼种群内克隆之间的镶嵌明显,这可能与珠芽蓼过渡型的克隆构型有关。研究中珠芽蓼种群的构型有游击型、密集型以及这两者之间的过渡类型;4)采用SPSS软件对珠芽蓼种群的克隆多样性与海拔高度进行相关性分析,结果显示它们之间并无明显的相关性。     

艾纳香野生种群克隆多样性及克隆结构研究

艾纳香是具有克隆生长习性的多年生宿根性草本植物,其广布于中国南部,为了更有效地保护和合理利用艾纳香资源,本文利用RAPD分子标记技术,对4个野生艾纳香种群进行了克隆结构和克隆多样性(单克隆种群或多克隆种群)进行了初步研究。结果表明:(1)10对10bp随机引物共检测到70条谱带,其中多态带为60条,占85.71%,检测到64个基因型,且全部为局限基因型;(2)与Ellstrand Roose(1987)总结的克隆多样性平均值(PD=0.17,D=0.62)相比艾纳香的种群克隆多样性水平稍高,Simpson指数平均为0.973,基因型比率PD平均为0.800;(3)遗传一致度和遗传距离分析表明,4个艾纳香野生种群被分成两组,一组是海南的所有种群,另外一组是云南类群。     

带状间伐对巴山木竹林复壮更新及大熊猫取食的影响

间伐是竹林复壮更新的有效手段之一.以陕西佛坪国家自然保护区为研究区域,对大熊猫(Ailuropoda melanoleuca)冬季栖息地非主要采食区域竹林老龄化严重且密度过大的巴山木竹(Bashania fargesii)林进行为期3年(2017至2019年)的带状间伐样方监测,研究间伐对竹林复壮更新以及大熊猫觅食选择...     

Clonality in the Endangered <Emphasis Type="Italic">Ambrosia pumila</Emphasis> (Asteraceae) Inferred from RAPD Markers; Implications for Conservation and Management

Clonal plants have the ability to spread and survive over long periods of time by vegetative growth. For endangered species, the occurrence of clonality can have significant impacts on levels of genetic diversity, population structure, recruitment, and the implementation of appropriate conservation strategies. Here we␣examine clone structure in three populations of Ambrosia pumila (Nutt.) Gray (Asteraceae), a federally endangered clonal species from southern California. Ambrosia pumila is a perennial herbaceous species spreading from a rhizome, and is frequently found in dense patches of several hundred stems in a few square meters. The primary habitat for this species is upper terraces of rivers and drainages in areas that have been heavily impacted by anthropogenic disturbances and changing flood regimes. RAPD markers were employed to document the number and distribution of clones within multiple 0.25 m² plots from each of three populations. Thirty-one multi-locus genotypes were identified from the 201 stems sampled. The spatial distribution of clones was limited with no genotypes shared between plots or populations. Mean clone size was estimated at 9.10 ramets per genet. Genets in most plots were intermingled, conforming to a guerrilla growth form. The maximum genet spread was 0.59 m suggesting that genets can be larger than the sampled 0.25 m² plots. Spatial autocorrelation analysis found a lack of spatial genetic structure at short distances and significant structure at large distances within populations. Due to the occurrence of multiple genets within each population, the limited spread of genets, and a localized genetic structure, conservation activities should focus on the maintenance of multiple populations throughout the species range.     

Dynamics of distribution and performance of ramets constructing genets: a demographic�Cgenetic study in a clonal plant, Convallaria keiskei

Background and Aims

In clonal plants producing vegetative offspring, performance at the genet level as well as at the ramet level should be investigated in order to understand the entire picture of the population dynamics and the life history characteristics. In this study, demography, including reproduction and survival, the growth patterns and the spatial distributions of ramets within genets of the clonal herb Convallaria keiskei were explored.

Methods

Vegetative growth, flowering and survival of shoots whose genets were identified using microsatellite markers were monitored in four study plots for 3 years (2003–2005). The size structures of ramets in genets and their temporal shifts were then analysed. Their spatial distributions were also examined.

Key Results

During the census, 274 and 149 ramets were mapped in two 1 × 2 m plots, and 83 and 94 ramets in two 2 × 2 m quadrats. Thirty-eight genotypes were identified from 580 samples. Each plot included 5–18 genets, and most ramets belonged to the predominant genet(s) in each plot. Shoots foliated yearly for several years, but flowering ramets did not have an inflorescence the next year. A considerable number of new clonal offspring persistently appeared, forming a bell-shaped curve of the size structure of ramets in each genet. Comparing the structures modelled by the normal distributions suggested variation among ramets belonging to a single genet and variation among genets. Furthermore, spatial analyses revealed clumped and distant distributions of ramet pairs in a genet, in which the distant patterns corresponded to the linearly elongating clonal growth pattern of this species.

Conclusion

Characteristics of ramet performances such as flowering and recruitment of clonal offspring, in addition to growth, played a large part in the regulation of genet dynamics and distribution, which were different among the studied genets. These might be characteristics particularly relevant to clonal life histories.Key words: Clonal plant, Convallaria keiskei, demography, genet, genetic identification, growth pattern, life history, ramet, spatial distribution     

Clonal and spatial genetic structure within populations of a coastal plant, Carex kobomugi (Cyperaceae)

Clarification of clonal growth pattern is critical for understanding the population dynamics and reproductive system evolution of clonal plant species. The contribution of clonality to the spatial genetic structure (SGS) within populations is also an important issue. I examined the spatial distribution of genetic variability within two populations of the coastal plant Carex kobomugi using seven microsatellite loci. Genotyping of 226 and 140 ramets within 14 × 40 m and 14 × 34 m plots on two populations revealed 36 and 33 multilocus genotypes, respectively. To quantify the extent of intermingling among clones, for each genet, I calculated the dominance of ramets belonging to a particular genet within a spatial range of the genet. Furthermore, I analyzed spatial distribution of genotypes within 2 × 2 m and 1 × 2 m quadrats using second-order spatial statistics. These analyses indicated that clones are highly intermingled, suggesting a low level of spatial interaction among clones. Spatial autocorrelation analysis of kinship coefficient including all pairs of ramets showed significantly stronger SGS than analysis considering only pairs between different genets. I conclude that clonal propagation largely contributes to SGS at a fine scale.     

Genotypic diversity,molecular markers and spatial distribution of genets in clonal plants,a literature survey

We present a literature survey of studies using molecular markers to investigate genet diversity and structure in clonal plants. The data from 40 studies comprised 45 species of which only two were studied by DNA methods, the rest by isozyme markers. Less than one third of the studies provided information about the spatial distribution of individual genets within populations, and only 12.5% of the studies used mapping of all ramets within plots or part of the population in combination with identification of multilocus genotypes. We also present two case studies. InGlechoma hederacea morphological criteria were used to select clones. Multi-samples of ramets within these “clones” turned out to be variable using isozymes indicating that these “clones” in most cases consisted of several genets. One individual multilocus genotype covered tens of square metres. InHylocomium splendens samples from 10×10 cm plots usually consisted of a mixture of multilocus genotypes, but occasionally the whole plot consisted of one genet.     

Floral distribution,clonal structure,and their effects on pollination success in a self-incompatible <Emphasis Type="Italic">Convallaria keiskei</Emphasis> population in northern Japan

In plant species, when clonal growth produces a patchy structure and flowering ramets are clustered, the amount of pollen contributing to reproductive success is often regulated by pollinator efficiency and geitonogamy. The spatial population structure may influence reproductive success. We examined the clonal structure, the spatial ramet distribution, and their combined effects on fruit set in a natural population of the insect-pollinated, self-incompatible clonal herb, Convallaria keiskei, in northern Japan. The number of shoots, flowers, and fruits in 1-m² quadrats were counted at every 5 m grid point in an established 100 × 90-m study plot. From all the quadrats where shoots existed, leaf samples were collected for allozyme analysis. Using the two spatial parameters of flowering ramet densities and genotypes, we then constructed individual-based fruit-set models. A total of 236 quadrats contained shoots, and 135 contained flowering ramets, which indicated expanded distribution of this plant throughout the study plot, while shoots, flowers and fruits all showed clustering distributions. Allozyme analysis of 282 samples revealed 94 multilocus genotypes. The largest clone extended to more than 40 m, whereas 56 genotypes were detected in only one sample. Several large clones and many small clones were distributed close to each other. Fine-scale spatial modelling revealed that the neighbouring flower numbers of different genotypes, compared with local genet or flower diversity, more influenced fruit set, in which the range of the neighbour was 14.5 m. These findings indicate that the compatible pollen dispersed by insect pollinators has a significant effect on sexual reproduction, in this C. keiskei population. Consequently, the spatial structure, which includes both genet distribution and clonal expansion by ramets, had a significant effect on pollination success.     

Out in the cold – how big and how old? Genetic fingerprinting reveals long‐lived individuals withstand climatic oscillations in the arctic‐alpine

In long‐lived, clonally reproducing species, assessing organism size is a nontrivial endeavour because each genetically distinct entity (genet) may comprise multiple modular units (ramets). Attributes of clonally reproducing populations, such as genet size, longevity and clonal diversity (the number of genets in a population), have significant implications for the persistence of populations over time. In the context of climate change, population persistence contributes to community stability and ecosystem resilience. Do clonal individuals persist through periods of climatic oscillations? Are clonal populations composed of a few large and persistent clones, or do they include clones of different sizes and ages? In this issue, de Witte et al. (2012) present an exciting analysis of clonal diversity and genet longevity in populations of four arctic‐alpine plant species with contrasting life histories: Carex curvula, Dryas octopetala, Salix herbacea and Vaccinium uliginosum. Using amplified fragment length polymorphism (AFLP) data, the authors demonstrate that genet size ranged from a few centimetres to 18 metres and age estimates for the largest genets ranged from 500 to 4900 years. These data reveal that clonally reproducing populations include individuals that have outlived significant changes in climate. Despite the longevity of some individuals, clonal diversity within populations was high, with most individuals existing as small, relatively young genets. Long‐lived individuals, together with high numbers of younger plants, ensure repeated recruitment and population persistence over time. This study represents a novel and timely contribution to a growing body of work aimed at understanding population persistence in changing climates.     

Local forest environment largely affects below-ground growth, clonal diversity and fine-scale spatial genetic structure in the temperate deciduous forest herb Paris quadrifolia

Paris quadrifolia (herb Paris) is a long-lived, clonal woodland herb that shows strong differences in local population size and shoot density along an environmental gradient of soil and light conditions. This environmentally based structuring may be mediated by differences in clonal growth and seedling recruitment through sexual reproduction. To study the interrelationship between environmental conditions and spatial patterns of clonal growth, the spatial genetic structure of four P. quadrifolia populations growing in strongly contrasting sites was determined. In the first place, plant excavations were performed in order to (i) determine differences in below-ground growth of genets, (ii) investigate connectedness of ramets and (iii) determine total genet size. Although no differences in internode length were found among sites, clones in moist sites were much smaller (genets usually consisted of 1-3 interconnected shoots, most of them flowering) than genets in dry sites, which consisted of up to 15 interconnected shoots, the majority of which were vegetative. Further, amplified fragment length polymorphism (AFLP) markers were used. Clonal diversity was higher in populations located in moist and productive ash-poplar forests compared to those found in drier and less productive mixed forest sites (G/N: 0.27 and 0.14 and Simpson's D: 0.84 and 0.75, respectively). Patterns of spatial population genetic structure under dry conditions revealed several large clones dominating the entire population, whereas in moist sites many small genets were observed. Nevertheless, strong spatial genetic structure of the genet population was observed. Our results clearly demonstrate that patterns of clonal diversity and growth form of P. quadrifolia differ among environments. Limited seedling recruitment and large clone sizes due to higher connectedness of ramets explain the low clonal diversity in dry sites. In moist sites, higher levels of clonal diversity and small clone sizes indicate repeated seedling recruitment, whereas strong spatial genetic structure suggests limited seed dispersal within populations.     

Three-gene identity coefficients demonstrate that clonal reproduction promotes inbreeding and spatial relatedness in yellow-cedar, Callitropsis nootkatensis

Asexual reproduction has the potential to promote population structuring through matings between clones as well as through limited dispersal of related progeny. Here we present an application of three-gene identity coefficients that tests whether clonal reproduction promotes inbreeding and spatial relatedness within populations. With this method, the first two genes are sampled to estimate pairwise relatedness or inbreeding, whereas the third gene is sampled from either a clone or a sexually derived individual. If three-gene coefficients are significantly greater for clones than nonclones, then clonality contributes excessively to genetic structure. First, we describe an estimator of three-gene identity and briefly evaluate its properties. We then use this estimator to test the effect of clonality on the genetic structure within populations of yellow-cedar (Callitropsis nootkatensis) using a molecular marker survey. Five microsatellite loci were genotyped for 485 trees sampled from nine populations. Our three-gene analyses show that clonal ramets promote inbreeding and spatial structure in most populations. Among-population correlations between clonal extent and genetic structure generally support these trends, yet with less statistical significance. Clones appear to contribute to genetic structure through the limited dispersal of offspring from replicated ramets of the same clonal genet, whereas this structure is likely maintained by mating among these relatives.     

Clonal and fine-scale genetic structure in populations of a restricted Korean endemic, Hosta jonesii (Liliaceae) and the implications for conservation

BACKGROUND AND AIMS: In plant populations the magnitude of spatial genetic structure of apparent individuals (including clonal ramets) can be different from that of sexual individuals (genets). Thus, distinguishing the effects of clonal versus sexual individuals in population genetic analyses could provide important insights for evolutionary biology and conservation. To investigate the effects of clonal spread on the fine-scale spatial genetic structure within plant populations, Hosta jonesii (Liliaceae), an endemic species to Korea, was chosen as a study species. METHODS: Using allozymes as genetic markers, spatial autocorrelation analysis of ramets and of genets was conducted to quantify the spatial scale of clonal spread and genotype distribution in two populations of H. jonesii. KEY RESULTS: Join-count statistics revealed that most clones are significantly aggregated at < 3-m interplant distance. Spatial autocorrelation analysis of all individuals resulted in significantly higher Moran's I values at 0-3-m interplant distance than analyses of population samples in which clones were excluded. However, significant fine-scale genetic structure was still observed when clones were excluded. CONCLUSIONS: These results suggest that clones enhance the magnitude of spatial autocorrelation due to localized clonal spread. The significant fine-scale genetic structure detected in samples excluding clones is consistent with the biological and ecological traits exhibited by H. jonesii including bee pollination and limited seed dispersal. For conservation purposes, genetic diversity would be maximized in local populations of H. jonesii by collecting or preserving individuals that are spaced at least 5 m apart.