Metacommunity patterns in larval odonates

The growth of metacommunity ecology as a subdiscipline has increased interest in how processes at different spatial scales structure communities. However, there is still a significant knowledge gap with respect to relating the action of niche- and dispersal-assembly mechanisms to observed species distributions across gradients. Surveys of the larval dragonfly community (Odonata: Anisoptera) in 57 lakes and ponds in southeast Michigan were used to evaluate hypotheses about the processes regulating community structure in this system. We considered the roles of both niche- and dispersal-assembly processes in determining patterns of species richness and composition across a habitat gradient involving changes in the extent of habitat permanence, canopy cover, area, and top predator type. We compared observed richness patterns and species distributions in this system to patterns predicted by four general community models: species sorting related to adaptive trade-offs, a developmental constraints hypothesis, dispersal assembly, and a neutral community assemblage. Our results supported neither the developmental constraints nor the neutral-assemblage models. Observed patterns of richness and species distributions were consistent with patterns expected when adaptive tradeoffs and dispersal-assembly mechanisms affect community structure. Adaptive trade-offs appeared to be important in limiting the distributions of species which segregate across the habitat gradient. However, dispersal was important in shaping the distributions of species that utilize habitats with a broad range of hydroperiods and alternative top predator types. Our results also suggest that the relative importance of these mechanisms may change across this habitat gradient and that a metacommunity perspective which incorporates both niche- and dispersal-assembly processes is necessary to understand how communities are organized. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Dynamics of a intraguild predation model with generalist or specialist predator

Intraguild predation (IGP) is a combination of competition and predation which is the most basic system in food webs that contains three species where two species that are involved in a predator/prey relationship are also competing for a shared resource or prey. We formulate two intraguild predation (IGP: resource, IG prey and IG predator) models: one has generalist predator while the other one has specialist predator. Both models have Holling-Type I functional response between resource-IG prey and resource-IG predator; Holling-Type III functional response between IG prey and IG predator. We provide sufficient conditions of the persistence and extinction of all possible scenarios for these two models, which give us a complete picture on their global dynamics. In addition, we show that both IGP models can have multiple interior equilibria under certain parameters range. These analytical results indicate that IGP model with generalist predator has “top down” regulation by comparing to IGP model with specialist predator. Our analysis and numerical simulations suggest that: (1) Both IGP models can have multiple attractors with complicated dynamical patterns; (2) Only IGP model with specialist predator can have both boundary attractor and interior attractor, i.e., whether the system has the extinction of one species or the coexistence of three species depending on initial conditions; (3) IGP model with generalist predator is prone to have coexistence of three species.     

THE ORIGIN OF POLYMORPHIC CRYPSIS IN A HETEROGENEOUS ENVIRONMENT

Polymorphic crypsis has been observed in several taxa, but has, until now, lacked a firm theoretical understanding. How does a single morph, well camouflaged in one type of habitat, evolve crypsis in another, not isolated, habitat? We here analyze a model of one prey species living in two different habitats connected by passive dispersal. We find that the rate of dispersal, the trade‐off between crypticity in the habitats, and the amount of predation determines whether the prey species can become cryptic in two different habitats through evolutionary branching. Intermediate values of all parameters seem to promote evolutionary branching leading to polymorphism, and a more extreme value of one parameter can be balanced by another. Other parameter combinations lead to either a single habitat specialist or an intermediate generalist type, partly cryptic in both habitats. When the predator follows a type III functional response, the parameter space for when the prey will undergo evolutionary branching is remarkably larger than the corresponding parameter space for a type II functional response. Evolutionary branching can occur both at the intermediate generalist strategy, or close to a specialist strategy.     

Spatial dynamics of keystone predation

1. I investigated the effects of dispersal on communities of keystone predators and prey. I obtained two key results. 2. First, a strong trade-off between competitive ability and predator susceptibility allows consumer coexistence over a large resource productivity range, but it also lowers the predator-susceptible superior competitor's abundance and increases its risk of extinction. Thus, unexpectedly, dispersal plays a more important role in coexistence when predator-mediated coexistence is strong rather than weak. The interplay between the trade-off, small population sizes resulting from transient oscillations, and dispersal leads to qualitatively different species distributions depending on the relative mobilities of the consumers and predator. These differences yield comparative predictions that can be tested with data on trade-off strength, dispersal rates, and species distributions across productivity gradients. 3. Second, there is an asymmetry between species in their dispersal effects: the predator-resistant inferior competitor's dispersal has a large effect, but the predator-susceptible superior competitor's dispersal has no effect, on coexistence and species' distributions. The inferior competitor's dispersal also mediates the predator's dispersal effects: the predator's dispersal has no effect when the inferior competitor is immobile, and a large effect when it is mobile. The net outcome of the direct and indirect effects of the inferior competitor's dispersal is a qualitative change in the species' distributions from interspecific segregation to interspecific aggregation. 4. The important point is that differences between species in how they balance resource acquisition and predator avoidance can lead to unexpected differences in their dispersal effects. While consumer coexistence in the absence of dispersal is driven largely by the top predator, consumer coexistence in the presence of dispersal is driven largely by the predator-resistant inferior competitor.     

Context-dependent effects of predator removal from experimental microcosm communities

The loss of a predator from an ecological community can cause large changes in community structure and ecosystem processes, or have very little consequence for the remaining species and ecosystem. Understanding when and why the loss of a predator causes large changes in community structure and ecosystem processes is critical for understanding the functional consequences of biodiversity loss. We used experimental microbial communities to investigate how the removal of a large generalist predator affected the extinction frequency, population abundance and total biomass of its prey. We removed this predator in the presence or absence of an alternative, more specialist, predator in order to determine whether the specialist predator affected the outcome of the initial species removal. Removal of the large generalist predator altered some species' populations but many were unaffected and no secondary extinctions were observed. The specialist predator, though rare, altered the response of the prey community to the removal of the large generalist predator. In the absence of the specialist predator, the effects of the removal were only measurable at the level of individual species. However, when the specialist predator was present, the removal of the large generalist predator affected the total biomass of prey species. The results demonstrate that the effect of species loss from high trophic levels may be very context-dependent, as rare species can have disproportionately large effects in food webs.     

Environmental gradients and the structure of freshwater snail communities

A fundamental goal of ecology is to understand the factors that influence community structure and, consequently, generate heterogeneity in species richness across habitats. While niche‐assembly (e.g. species‐sorting) and dispersal‐assembly mechanisms are widely recognized as factors structuring communities, there remains substantial debate concerning the relative importance of each of these mechanisms. Using freshwater snails as a model system, we explore how abiotic and biotic factors interact with dispersal to structure local communities and generate regional patterns in species richness. Our data set consisted of 24 snail species from 43 ponds and lakes surveyed for seven years on the Univ. of Michigan's E. S. George Reserve and Pinckney State Recreation Area near Ann Arbor, Michigan. We found that heterogeneity in habitat conditions mediated species‐sorting mechanism to drive patterns in snail species richness across sites. In particular, physical environmental variables (i.e. habitat area, hydroperiod, and canopy cover), pH, and fish presence accounted for the majority of variation in the species richness across sites. We also found evidence of Gleasonian structure (i.e. significant species turnover with stochastic species loss) in the metacommunity. Turnover in snail species distributions was driven by the replacement of several pulmonate species with prosobranch species at the pond permanence transition. Turnover appeared to be driven by physiological constraints associated with differences in respiration mode between the snail orders and shell characteristics that deter molluscivorous fish. In contrast to these niche‐assembly mechanisms, there was no evidence that dispersal‐assembly mechanisms were structuring the communities. This suggests that niche‐assembly mechanisms are more important than dispersal‐assembly mechanisms for structuring local snail communities.     

Productivity, dispersal and the coexistence of intraguild predators and prey

A great deal is known about the influence of dispersal on species that interact via competition or predation, but very little is known about the influence of dispersal on species that interact via both competition and predation. Here, I investigate the influence of dispersal on the coexistence and abundance-productivity relationships of species that engage in intraguild predation (IGP: competing species that prey on each other). I report two key findings. First, dispersal enhances coexistence when a trade-off between resource competition and IGP is strong and/or when the Intraguild Prey has an overall advantage, and impedes coexistence when the trade-off is weak and/or when the Intraguild Predator has an overall advantage. Second, the Intraguild Prey's abundance-productivity relationship depends crucially on the dispersal rate of the Intraguild Predator, but the Intraguild Predator's abundance-productivity relationship is unaffected by its own dispersal rate or that of the Intraguild Prey. This difference arises because the two species engage in both a competitive interaction as well as an antagonistic (predator-prey) interaction. The Intraguild Prey, being the intermediate consumer, has to balance the conflicting demands of resource acquisition and predator avoidance, while the Intraguild Predator has to contend only with resource acquisition. Thus, the Intraguild Predator's abundance increases monotonically with resource productivity regardless of either species' dispersal rate, while the Intraguild Prey's abundance-productivity relationship can increase, decrease, or become hump-shaped with increasing productivity depending on the Intraguild Predator's dispersal rate. The important implication is that a species' trophic position determines the effectiveness of dispersal in sampling spatial environmental heterogeneity. The dispersal behavior of a top predator is likely to have a stronger effect on coexistence and spatial patterns of abundance than the dispersal behavior of an intermediate consumer.     

Predators alter the scaling of diversity in prey metacommunities

Although predator effects on the number of locally coexisting species are well understood, there are few formal predictions of how these local predator effects influence patterns of prey diversity at larger spatial scales. Building on the theory of island biogeography, we develop a simple model that describes how predators can alter the scaling of diversity in prey metacommunities and compares the effects of generalist and specialist predators on regional prey diversity. Generalist predators, which consume prey randomly with respect to species identity, are predicted to reduce α‐diversity and increase β‐diversity thereby maintaining regional diversity (γ‐diversity). Alternatively, specialist predators, which filter out prey species intolerant of predators, are predicted to reduce bothα‐diversity andβ‐diversity by causing the same prey species to be extirpated in each locality, resulting in regional prey species extinctions and lower γ‐diversity. These distinct effects of generalist and specialist predators on prey diversity at different spatial scales are uniquely shaped by the extent of predation within those metacommunities. Overall, our model results make general predictions for how different types of predators can differentially affect prey diversity across spatial scales, allowing a more complete understanding of the possible implications of predator eradications or introductions for biodiversity.     

Dynamic trait-niche relationships shape niche partitioning across habitat transformation gradients

Multidimensional approaches examining complex trait-niche relationships are crucial to understand community assembly. This is particularly important across habitat transformation gradients because specialists are progressively substituted by generalists and, despite increasing functional homogenization, in both specialist and generalist communities niche partitioning is apparent. Here, in line with the continuum hypothesis, we expected that divergent trait-niche relationships would arise in passerine assemblages across the natural-to-urban transformation gradient. More specifically, we expected that traits linking form to function would be more important in less transformed habitats, while population density and traits linked to dispersal and dominance would predominate in more transformed habitats. Accordingly, we found that beak length and its interaction with tarsus length correlated significantly with isotopic niches in natural and rural habitats, where specialists predominate. Conversely, body size and aggressiveness only showed significant relationships with isotopic niches with increasing habitat transformation, where generalists prevail. Interestingly, we recorded a mix of these processes in rural habitats, which acted as a frontier between these two domains. Our study is thus important in showing that a complex combination of morphological and behavioral traits determine niche characteristics, and that these relationships are dynamic across habitat transformation gradients.     

Predator dispersal determines the effect of connectivity on prey diversity

Linking local communities to a metacommunity can positively affect diversity by enabling immigration of dispersal-limited species and maintenance of sink populations. However, connectivity can also negatively affect diversity by allowing the spread of strong competitors or predators. In a microcosm experiment with five ciliate species as prey and a copepod as an efficient generalist predator, we analysed the effect of connectivity on prey species richness in metacommunities that were either unconnected, connected for the prey, or connected for both prey and predator. Presence and absence of predator dispersal was cross-classified with low and high connectivity. The effect of connectivity on local and regional richness strongly depended on whether corridors were open for the predator. Local richness was initially positively affected by connectivity through rescue of species from stochastic extinctions. With predator dispersal, however, this positive effect soon turned negative as the predator spread over the metacommunity. Regional richness was unaffected by connectivity when local communities were connected only for the prey, while predator dispersal resulted in a pronounced decrease of regional richness. The level of connectivity influenced the speed of richness decline, with regional species extinctions being delayed for one week in weakly connected metacommunities. While connectivity enabled rescue of prey species from stochastic extinctions, deterministic extinctions due to predation were not overcome through reimmigration from predator-free refuges. Prey reimmigrating into these sink habitats appeared to be directly converted into increased predator abundance. Connectivity thus had a positive effect on the predator, even when the predator was not dispersing itself. Our study illustrates that dispersal of a species with strong negative effects on other community members shapes the dispersal-diversity relationship. When connections enable the spread of a generalist predator, positive effects of connectivity on prey species richness are outweighed by regional extinctions through predation.     

Variation in the degree of specialization can maintain local diversity in model communities

We hypothesize that the continuum between generalist and specialist adaptations is an important general trade-off axis in the maintenance of local diversity, and we explore this idea with a simple model in which there are patch types to which species arrive as propagules and compete. Each patch type is defined by a competitive ranking of all species. A highly specialist species is the top competitor in one patch type but has a relatively low average ranking across different patch types, while a generalist species has a high average rank across patch types but is not the top competitor in any patch type. We use random dispersal and vary the fecundity of all species together to vary total propagule density and therefore recruitment limitation and density-dependent mortality. When fecundity is very high, each patch becomes occupied by its specialist species and generalists go extinct, so the number of species at equilibrium is equal to the number of patch types. If fecundity is very low, generalists dominate and specialists go extinct. There is a range of fecundity levels in which specialists, generalists, and intermediates coexist, and the number of species is substantially greater than the number of patch types. While coexistence of specialists and generalists has been considered a problem in evolutionary ecology, our results suggest to the contrary that this trade-off contributes to the maintenance of local diversity.     

Hydroperiod,predators and the distribution of physid snails across the freshwater habitat gradient

1. Studies of species distributions across environmental gradients further our understanding of mechanisms regulating species diversity at the landscape scale. For some freshwater taxa the habitat gradient from small, shallow and temporary ponds to large, deep and permanent lakes has been shown to be an important environmental axis. Freshwater snails are key players in freshwater ecosystems, but there are no comprehensive studies of their distributions across the entire freshwater habitat gradient. Here we test the hypothesis that snail species in the family Physidae are distributed in a non‐random manner across the habitat gradient. We sampled the snails, their predators and the abiotic environment of 61 ponds and lakes, spanning a wide range in depth and hydroperiod. 2. Temporary habitats had the lowest biomass of predators. Shallow permanent ponds had the highest biomass of invertebrate predators but an intermediate fish biomass. Deep ponds and lakes had the highest fish biomass and intermediate invertebrate biomass. Five species of physids occurred in the regional species pool and 60 of the 61 ponds and lakes surveyed contained physid snails. Each pond and lake contained an average of just 1.2 physid species, illustrating limited membership in local communities and substantial among‐site heterogeneity in species composition. 3. Physids showed strong sorting along the habitat gradient, with Physa vernalis found in the shortest hydroperiod ponds and Aplexa elongata, P. gyrina, P. acuta and P. ancillaria found in habitats of successively greater permanence. When organised into a site‐by‐species incidence matrix with sites ordered according to their hydroperiods, we found the pattern of incidence to be highly coherent, showing that much of the heterogeneity in species composition from one pond to another is explained by hydroperiod. We also found that the number of species replacements along this gradient was higher than random, showing that replacement is more important than nesting in describing species composition in ponds of different hydroperiod. 4. Discriminant analysis showed that pond depth, invertebrate biomass and fish biomass were the best predictors of species composition. Analysis of these niche dimensions showed that P. vernalis and A. elongata were most successful in shallow, temporary ponds with few predators. P. gyrina and P. acuta were typically found in ponds of intermediate depth and high predator abundance. P. ancillaria was found in the deepest lakes, which had abundant fish predators but few invertebrate predators. Of the five species considered, P. ancillaria, P. vernalis and A. elongata were relatively specialised with regard to key habitat characteristics, P. gyrina was moderately generalised and P. acuta was remarkably generalised, since it alone occurred across the entire freshwater habitat gradient. The exceptional habitat breadth of P. acuta stands in contrast to distributional studies of other freshwater taxa and deserves further attention.     

Dispersal: risk spreading versus local adaptation

I investigate how risk spreading in stochastic environments and adaptation to permanent properties of local habitats interplay in the simultaneous evolution of dispersal and habitat specialization. In a simple two-patch model, I find many types of locally evolutionarily stable attractors of dispersal and of a trait involved in habitat specialization, including a single habitat specialist and a coalition of two specialists with low dispersal, a generalist with high dispersal, and several types of dispersal polymorphisms. In general, only one attractor is a global evolutionarily stable strategy (ESS). In addition to the ESS analysis, I also present some examples of the dynamics of evolution that exhibit adaptive diversification by evolutionary branching.     

Scale-dependence and mechanisms of dispersal in freshwater zooplankton

Communities of organisms form as a result of both interspecific and abiotic interactions within local habitat patches and dispersal among patches in a region. Local processes are expected to play a dominant role when dispersal occurs much more often than extinction. We performed two field experiments to examine rates and mechanisms of dispersal in freshwater pond zooplankton communities. First, we tested the effect of distance from a source on the rate of colonization of artificial habitat by placing wading pools at 5, 10, 30 and 60 m from two natural fishless ponds and observing the succession of zooplankton. Seventy-eight percent of the species in the source ponds that were capable of living in the pools colonized at least once during the experiment. A new species was found in the pools on average once every four days, suggesting that colonization events occur on the order of days to weeks for many species. Colonization rates declined further from the source at one pond but not the other, and the effect of distance was relatively weak at both ponds. This suggests that many species disperse broadly over short distances. The second experiment tested the role of animal vectors for zooplankton dispersal by restricting access to the pools. Eight treatments were imposed that excluded potential animal vectors along a body size gradient from large mammals to small insects. While the treatments affected zooplankton colonization, many species invaded even when all animals larger than 1 mm were excluded. Animal vectors may therefore be less important for dispersal than wind. Our results suggest that zooplankton are highly effective dispersers over short distances, and can disperse via several mechanisms. Local interactions should therefore play a dominant role in structuring these communities at small regional scales.     

The role of dispersal mode and habitat specialisation in metacommunity structuring of aquatic macroinvertebrates in isolated spring fens

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Scale‐dependent frequency distributions of plant species in dune slacks: Dispersal and niche limitation

Question: How do distribution patterns change with increasing scale level, and can this shift be attributed to dispersal and/or niche limitation? Location: Dune slacks at the Belgian and North French coast. Method: Frequency distribution patterns of species were tested over different scale levels (ranging from 0.008 to 45 km²). Analyses were executed for the total species pool and for subsets of species with high and low dispersal rates and habitat generalist and specialist species. Results: Species distributions for the total species pool on scale levels larger than 1.5 km² were unimodal, with an overrepresentation of rare species. With decreasing scale level, the proportion of common species increased, leading to weak bimodality. Distributions of subsets of slowly dispersing and habitat specialist species are on all scale levels characterised by a strongly unimodal pattern. The subset of species with high dispersal rates and habitat generalist species has a higher proportion of common species, leading to a significant core peak. Conclusions: On all scale levels both dispersal and niche limitation are hampering the wider distribution of rare species. However, since isolation and habitat heterogeneity are limited on the smaller scale levels, a larger proportion of well dispersing and habitat generalist species is able to occupy a high number of patches, resulting in a significant core peak for the total species pool.     

Trait flexibility of generalist invertebrates exposed to contrasting predation and drying stressors

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Salmonella strains isolated from Galápagos iguanas show spatial structuring of serovar and genomic diversity

It is thought that dispersal limitation primarily structures host-associated bacterial populations because host distributions inherently limit transmission opportunities. However, enteric bacteria may disperse great distances during food-borne outbreaks. It is unclear if such rapid long-distance dispersal events happen regularly in natural systems or if these events represent an anthropogenic exception. We characterized Salmonella enterica isolates from the feces of free-living Galápagos land and marine iguanas from five sites on four islands using serotyping and genomic fingerprinting. Each site hosted unique and nearly exclusive serovar assemblages. Genomic fingerprint analysis offered a more complex model of S. enterica biogeography, with evidence of both unique strain pools and of spatial population structuring along a geographic gradient. These findings suggest that even relatively generalist enteric bacteria may be strongly dispersal limited in a natural system with strong barriers, such as oceanic divides. Yet, these differing results seen on two typing methods also suggests that genomic variation is less dispersal limited, allowing for different ecological processes to shape biogeographical patterns of the core and flexible portions of this bacterial species' genome.     

Habitat subdivision causes changes in food web structure

Theory suggests that the response of communities to habitat subdivision depends on both species' characteristics and the extent to which species interact. For species with dynamics that are independent of other species, subdivision is expected to promote regional extinction as populations become small and isolated. By contrast, intermediate levels of subdivision can facilitate persistence of strongly interacting species. Consistent with this prediction, experimental subdivision lengthened persistence of some species, altering the extent of food web collapse through extinction. Extended persistence was associated with immigration rescuing a basal prey species from local extinction. As predicted by food web theory, habitat subdivision reduced population density of a top predator. Removal of this top predator from undivided microcosms increased the abundance of two other predator species, and these changes paralleled those produced by habitat subdivision. These results show that species interactions structured this community, and illustrate the need for investigations of other communities.     

Differences in predator composition alter the direction of structure‐mediated predation risk in macrophyte communities

Structural complexity strongly influences the outcome of predator–prey interactions in benthic marine communities affecting both prey concealment and predator hunting efficacy. How habitat structure interacts with species‐specific differences in predatory style and antipredatory strategies may therefore be critical in determining higher trophic functions. We examined the role of structural complexity in mediating predator–prey interactions across several macrophyte habitats along a gradient of structural complexity in three different bioregions: western Mediterranean Sea (WMS), eastern Indian Ocean (EIO) and northern Gulf of Mexico (NGM). Using sea urchins as model prey, we measured survival rates of small (juveniles) and medium (young adults) size classes in different habitat zones: within the macrophyte habitat, along the edge and in bare sandy spaces. At each site we also measured structural variables and predator abundance. Generalised linear models identified biomass and predatory fish abundance as the main determinants of predation intensity but the efficiency of predation was also influenced by urchin size class. Interestingly though, the direction of structure‐mediated effects on predation risk was markedly different between habitats and bioregions. In WMS and NGM, where predation by roving fish was relatively high, structure served as a critical prey refuge, particularly for juvenile urchins. In contrast, in EIO, where roving fish predation was low, predation was generally higher inside structurally complex environments where sea stars were responsible for much of the predation. Larger prey were generally less affected by predation in all habitats, probably due to the absence of large predators. Overall, our results indicate that, while the structural complexity of habitats is critical in mediating predator–prey interactions, the direction of this mediation is strongly influenced by differences in predator composition. Whether the regional pool of predators is dominated by visual roving species or chemotactic benthic predators may determine if structure dampens or enhances the influence of top–down control in marine macrophyte communities.