产喜树碱喜树内生真菌的筛选及喜树内生真菌的SRAP分析

生活在宿主植物里的内生真菌是很重要的药用资源。喜树是中国的传统药用植物。从喜树植物中分离得到了大约50种菌株,其中一株产喜树碱的菌株通过形态学鉴定为青霉属,这是首次在喜树植物中发现产喜树碱的青霉属菌株。为研究简单序列重复相关序列扩增多态性(SRAP)方法在喜树内生真菌中应用的可行性,选择了十株喜树内生真菌进行SRAP多态性分析。SRAP引物共扩增出1 295条带,而这些菌株也被分为三大类。这些结果表明,SRAP研究喜树内生真菌具有高效性,是讨论喜树内生真菌的遗传多样性的有效方法。     

四川大头茶繁殖分配及其环境适应性的关联度研究

 本文研究了四川缙云山亚热带常绿阔叶林不同群落类型中四川大头茶的繁殖分配(RA),并将植物种群的繁殖提高到种群适应对策的高度来分析,探索了应用灰色关联度分析、灰色动态模型研究四川大头茶繁殖分配的环境适应性。结果表明四川大头茶的RA随群落类型、年龄而发生变化,其每年繁殖分配所占比例为13.6％～20.0％,不同群落类型中四川大头茶RA大小顺序为大头茶纯林>针阔叶混交林>常绿阔叶林。关联度分析指出,10个环境生态因子中对四川大头茶繁殖分配影响较大的环境因素是群落土壤pH值、群落内的热状况和肥、水条件。繁殖分配与环境因子间相互作用的灰色关联时间动态模型方程为dy/dt+0.42y＝0.07x1–4.26x2–6.38x3+15.54x4–7.46x5+4.72x6+1.97x7–0.66x8+0.57x9–0.20x10     

Microsatellite primers for the endangered aquatic herb, Ottelia acuminata (Hydrocharitaceae)

? Premise of the study: Microsatellite primers were developed in the endangered aquatic herb, Ottelia acuminata, to characterize its genetic diversity and understand its population structure. ? Methods and Results: Eight polymorphic microsatellite markers were developed from two populations of O. acuminata in China. The number of alleles per locus ranged from one to 15; the observed and expected heterozygosities ranged from 0 to 0.885 and from 0 to 0.888, respectively, in the two populations. Selected loci also amplified successfully in O. sinensis. ? Conclusions: These microsatellite markers will facilitate further studies on the conservation genetics and evolutionary history of O. acuminata.     

Isolation and characterization of thirteen polymorphic microsatellite loci for Lithocarpus glaber

We isolated and characterized polymorphic microsatellite loci in Lithocarpus glaber (Fagaceae), an evergreen broadleaved monoecious tree, to provide tool for analyzing genetic structure and diversity. Thirteen polymorphic microsatellite loci were developed and tested in two L. glaber populations. The number of alleles per locus varied from 2 to 19. The observed and expected heterozygosities within populations were 0.037–0.833 and 0.316–0.931, respectively. Four loci significantly deviated from Hardy–Weinberg equilibrium after Bonferroni correction in each population and no significant linkage disequilibrium between pairs of loci was found. These polymorphic loci showed high levels of polymorphism within tested populations and will be useful in further population genetic studies.     

Molecular evidence for an extinct parent of the tetraploid species Microseris acuminata and M. campestris (Asteraceae, Lactuceae)

To determine the origin of the tetraploid annuals Microseris campestris and M. acuminata , chloroplast RFLP, RAPD and ITS sequence variability among nine populations of the two polyploids and 14 populations of the diploid annuals M. elegans and M. douglasii have been surveyed. Previously described variable chloroplast restriction sites infer M. douglasii as the possible maternal parent of both tetraploid species. However, the chloroplast genome typical for M. douglasii has now also been found in some plants of M. elegans . RAPD analysis revealed 172 polymorphic DNA markers that defined all four species as genetically distinct groups, but demonstrated closer associations between M. douglasii and M. acuminata , and between M. elegans and M. campestris . Sequencing of the ITS-1 and ITS-2 region yielded 73 phylogenetically informative sites. Thirty base-pair mutations separated the annual Microseris species from the outgroup, Uropappus lindleyi . The putative interspecific allotetraploid M. campestris contained only one type ITS sequence that, on the basis of eight synapomorphic substitutions was derived from M. elegans . The single ITS of M. acuminata shares six common sites with M. douglasii . Surprisingly, six sites were synapomorphic for the two tetraploids, M. campestris and M. acuminata , suggesting recombination within the ITS of both species with that of a common, now extinct, parental taxon, possibly the donor of the M. douglasii type chloroplasts found in both tetraploids. These results confirm the interpretation of M. campestris as derived from M. douglasii (extinct population) and M. elegans , and resolve the unknown origin of M. acuminata as an intraspecific hybrid between two very distinct populations of M. douglasii , one of them the same extinct M. douglasii form that contributes to M. campestris .     

Identification of RAPD markers linked to A and B genome sequences in Musa L.

Plantains and bananas (Musa spp. sect. eumusa) originated from intra- and interspecific hybridization between two wild diploid species, M. acuminata Colla. and M. balbisiana Colla., which contributed the A and B genomes, respectively. Polyploidy and hybridization have given rise to a number of diploid, triploid, and tetraploid clones with different permutations of the A and B genomes. Thus, dessert and highland bananas are classified mainly as AAA, plantains are AAB, and cooking bananas are ABB. Classification of Musa into genomic groups has been based on morphological characteristics. This study aimed to identify RAPD (random amplified polymorphic DNA) markers for the A and B genomes. Eighty 10-mer Operon primers were used to amplify DNA from M. acuminata subsp. burmannicoides clone 'Calcutta 4' (AA genomes) and M. balbisiana clone 'Honduras' (BB genomes). Three primers (A17, A18, and D10) that produced unique genome-specific fragments in the two species were identified. These primers were tested in a sample of 40 genotypes representing various genome combinations. The RAPD markers were able to elucidate the genome composition of all the genotypes. The results showed that RAPD analysis can provide a quick and reliable system for genome identification in Musa that could facilitate genome characterization and manipulations in breeding lines.     

酸性培养基对喜树叶片细胞壁降解的影响

在组织培养过程中对喜树叶片外植体进行解剖学观察。发现在组织培养条件下,喜树叶片在培养基的酸性环境中细胞壁呈现模糊微弱降解、明显降解和完全降解直至消失的解剖学特征。在同样的组培条件和相同的时间内,同一喜树叶片不同部位出现细胞壁程度不同的降解和消失现象,可能是喜树叶片因上表皮凸凹不平进而导致其不同部位与酸性培养基接触的程度不同,因而使培养基中的酸性物质对喜树叶片上表皮的不同部位影响出现异质化。本文对培养基中的酸性成分对喜树叶片细胞壁降解的影响有了进一步的认识和理解。     

Damage and Recovery of Riparian Sierra Palms after Hurricane Georges: Influence of Topography and Biotic Characteristics

Tropical forests are often shaped by disturbance events, especially in regions where hurricanes and other severe storms occur. We studied the effects of Hurricane Georges (September 1998) on the sierra palm ( Prestoea acuminata var. montana ) in the Luquillo Mountains of Puerto Rico. We established riparian transects along two headwater streams that were similar in size and location, but differed in riparian tree species composition and land-use history. Following Hurricane Georges, sierra palms were surveyed periodically for damage and recovery (measured by initial loss and subsequent regrowth of palm leaves), tree height, sun exposure, and production of inflorescences and infructescences. Palm height had the highest association with damage, with most damage occurring to canopy palms. Palm recovery (4 mo and 10 mo post-hurricane) was associated with high tree density, indicating that sun exposure was not limiting. Hurricane Georges likely reduced production of flowers and fruits in sierra palms for at least 10 mo following the storm, although production of new leaves was rapid. Although palms recovered quickly from defoliation after the hurricane, decreased reproduction resulted in reduced availability of fruit for terrestrial and aquatic consumers.     

Transferability and characterization of nine microsatellite markers for the tropical tree species Tabebuia roseo-alba

Microsatellite loci that were previously developed in the tropical tree Tabebuia aurea were used for the genetic analysis of Tabebuia roseo-alba populations. Nine of 10 simple sequence repeat markers were amplified, and the polymorphism was assessed in 58 individuals sampled from two stands in southeastern Brazil. All loci were polymorphic with Mendelian inheritance. The allele numbers were high, ranging from 5 to 13 in population I and 3 to 7 in population II, with means of 8.9 and 5.5, respectively. We conclude that these markers can be efficiently used for parentage and gene-flow studies.     

缙云山四川大头茶花粉游离脯氨酸含量与生殖产量特征研究

四川大头茶（Gordonia acuminata）是缙云山亚热带常绿阔叶林的优势树种之一,在缙云山的很多群落类型中均有分布。对缙云山四川大头茶的花粉游离脯氨酸含量的影响因素以及花粉游离脯氨酸含量与四川大头茶生殖产量之间的关系进行了研究。研究表明,缙云山四川大头茶的花粉游离脯氨酸含量不受植株年龄大小的影响,但与植株所处的群落类型有很大关系。常绿阔叶中四川大头茶的花粉游离脯氨酸含量最高,四川大头茶纯林中次之,针阔混交林中四川大头茶花粉游离脯氨酸含量最低。四川大头茶花蕾产量和果实产量随植株年龄的增大而增大,但座果率与植株年龄大小无关。对花粉游离脯氨酸含量与花蕾产量、果实产量和座果率之间的相关关系分析,花粉游离脯氨酸含量与花蕾产量不具有相关关系,与果实产量具有正相关关系,与座果率具有极显著正相关关系。这证实了与受精作用无关的生殖产量特征不受花粉游离脯氨酸含量影响,而与受精作用有关的生殖产量特征将受花粉游脯氨酸含量影响的研究假设。由于与花粉游离脯氨酸含量呈极显著正相关关系,座果率具有和花粉游离脯氨酸含量一样的群落间变化模式。     

Nonuniform linkage disequilibrium within a 1,500-kb region of the human immunoglobulin heavy-chain complex.

We have characterized 10 VH polymorphic loci of the VH2, VH3, VH4, and VH5 families. Eight of 10 VH polymorphisms were found to be insertion/deletion polymorphisms, probably the result of nonhomologous recombination over the course of evolution of the current human VH repertoire. The 10 VH polymorphic loci were analyzed in 10 three-generation and 10 two-generation Canadian caucasoid families. Linkage disequilibrium (allelic association) was measured between pairs of VH polymorphic loci, and 12 significant associations were found. The degree of linkage disequilibrium measured between IGH polymorphic loci was then compared with the physical distance separating the loci. The physical distance between IGH polymorphic loci does not entirely determine the degree of linkage disequilibrium between polymorphic loci. Two regions, one in the VH region (between VH3f-2 and VH5-2 and one in the CH region (between C delta and C gamma 3), were found to have linkage disequilibrium values approximately 1/3,000 of that observed in other portions of the IGH region. The previous identification of recombinants in the C delta-to C gamma 3 region indicates that these areas of low linkage disequilibrium are consistent with the presence of recombination hot spots. The observed high amount of recombination in the subtelomeric portion of chromosome 14 therefore appears to be the result of specific hot spots for recombination, rather than a general increase in recombination in this region.     

New Observations on the Choreotrich Ciliate Strombidinopsis acuminata Fauré-Fremiet 1924, and Comparison with Strombidinopsis jeokjo Jeong et al., 2004

ABSTRACT. A choreotrich ciliate collected in waters off Geoje Island, on the eastern coast of the South Sea of the southern coastal water of Korea was morphologically and biometrically investigated through observations of permanent preparations after protargol impregnations. Morphological data and ciliary patterns indicated that the ciliate should be identified as Strombidinopsis acuminata based on the number of somatic kineties. The vertical distribution of the population abundance was also examined in relation to environmental conditions: higher abundances occurred in surface water with higher temperature (22–23 °C), lower salinity (32 psu), and higher concentration (ca 10 μg/L) of chlorophyll a . The 18S rRNA gene of specimens from clonal cultures isolated from natural assemblages was sequenced. While this isolate of S. acuminata is closer to Strombidinopsis jeokjo (99.6–99.8%) than other isolates of S. acuminata (<99.0%), monophyly of S. acuminata was not rejected by the AU test. We discuss the discordance between morphological and molecular data for Strombidinopsis . In order to confirm the species level of the Strombidinopsis specimens, additional information is required based on genealogical analyses of multiple loci.     

Dinophysis blooms in Greek coastal waters (Thermaikos Gulf, NW Aegean Sea)

The first documented Dinophysis bloom from Greek coastal watersassociated with a diarrhetic shellfish toxins outbreak was recordedin January 2000 during the HAB monitoring program in ThermaikosGulf. A species with morphological features similar to D. acuminataClaparède and Lachmann dominated this bloom. MaximumD. cf. acuminata abundance (85.4 x 10³ cells L^–1) appearedin February 2000. In 2001, high numbers of D. cf. acuminata(5 x 10³ cells L^–1) were recorded in April under conditionsof weak thermal stratification, while in 2002 maximum numbers(37 x 10³ cells L^–1) of the same species were found inFebruary under low temperature levels (11.5–12.5°C).All Dinophysis blooms persisted for no more than 4 months. Inaddition to cells resembling typical D. cf. acuminata, cellsof similar shape but smaller in size were observed at differentstages of the blooms. Other observations include couplets oflarge and small-sized cells, and also a larger robust form witha dense granular cytoplasm. The D. cf. acuminata populationalways presented a stratified vertical distribution with verticalpeaks positioned in or just above the pycnocline. Among thephysico-chemical parameters, water temperature appears to bethe most important factor influencing the distribution of Dinophysisabundance.     

Comparison of the fine-scale genetic structure of three dipterocarp species

We investigated the fine-scale genetic structure of three tropical-rainforest trees, Hopea dryobalanoides, Shorea parvifolia and S. acuminata (Dipterocarpaceae), in Peninsular Malaysia, all of which cooccurred within a 6-ha plot in Pasoh Forest Reserve. A significant genetic structure was found in H. dryobalanoides, weaker (but still significant) genetic structure in S. parvifolia and nonsignificant structure in S. acuminata. Seeds of all three species are wind dispersed, and their flowers are thought to be insect pollinated. The most obvious difference among these species is their height: S. parvifolia and S. acuminata are canopy species, whereas H. dryobalanoides is a subcanopy species. Clear differences were also found among these species in their range of seed dispersal, which depends on the height of the release point; so taller trees disperse their seed more extensively. The estimates of seed dispersal area were consistent with the degree of genetic structure found in the three species. Therefore, tree height probably had a strong influence on the fine-scale genetic structure of the three species.     

Characterization and cross-amplification of 13 microsatellite loci in the northern pine processionary moth, Thaumetopoea pinivora (Lepidoptera: Notodontidae)

Thirteen polymorphic microsatellite loci were developed for the northern pine processionary moth (Thaumetopoea pinivora) and tested for cross-amplification in seven other species within the Thaumetopoea family. Number of alleles ranged from two to 10 when at least 28 individuals from one population were screened and one locus, Thapin06, appears to be sex linked. Expected heterozygosity ranged from 0.094 to 0.856 and observed heterozygosity ranged from 0.097 to 0.806. Amplification success varied between sister species, with two up to seven loci being successfully amplified. The described loci will be valuable for studying the population genetic structure and dispersal behaviour of this forest pest.     

Microsatellite loci for Gossypium davidsonii (Malvaceae) and other D-genome, Sonoran Desert endemic cotton species

? Premise of the study: Microsatellite primers previously developed for domesticated cotton (Gossypium hirsutum; tetraploid) were screened for their utility in investigating genetic structure and gene flow within G. davidsonii and five other wild, Mexican, D-genome cotton species (all diploid). ? Methods and Results: We screened 50 microsatellite primer pairs from the Cotton Marker Database, identifying 10 loci as polymorphic within G. davidsonii. In genotyping approximately 200 individuals from four populations, we found that the number of alleles per locus ranged from seven to 17, and mean observed and expected heterozygosity ranged from 0.145 to 0.492 and from 0.436 to 0.734, respectively. We genotyped six to 20 individuals from each of the remaining species, finding these 10 loci to cross-amplify in all cases and in most cases to be polymorphic. ? Conclusions: These markers may be useful for further investigation of population genetics of G. davidsonii and other wild D-genome cotton species.     

PERMANENT GENETIC RESOURCES: Development of polymorphic microsatellite markers in Acer mono Maxim

Thirteen polymorphic microsatellite markers were developed for Acer mono Maxim., one of the major components of deciduous forests in Japan. An average of 13.8 alleles were found, with expected heterozygosity ranging from 0.140 to 0.945 in 34 A. mono individuals from the Ogawa Forest Reserve in Ibaraki Prefecture, Japan. This set of microsatellite markers can be used to analyse mating patterns and gene flow in A. mono populations.     

影响喜树组织培养苗离体生根的因素

为了建立有效的喜树(Camptotheca acuminata)组培苗生根系统,提高其移栽成活率及适应性,用不同生长素种类及浓度、不同蔗糖浓度及不同培养基对喜树组培苗不定根形成影响以及移栽初期根系发育状况进行了研究.结果发现:1)生长素种类和浓度明显影响喜树组培苗不定根形成,在含有IBA0.5 mg·L-1培养基中取得了最佳生根效果,生根率达到了98%,外植体平均生根数为5.9条/株;2)不同浓度蔗糖对喜树组培苗生根也有一定影响,在10～30 g·L-1范围内,随着蔗糖浓度增加,生根百分率和生根数量都有增加,蔗糖浓度达到30 g·L-1时,生根百分率为95%,外植体平均生根数为5.4条/株;蔗糖浓度在40 g·L-1时,表现出对生根抑制作用;3)在基本培养基对喜树组培苗生根影响研究中发现,MS培养基对根形成表现出一定抑制作用;1/2MS和WPM培养基均适合喜树组培苗生根;4)根系发育正常的喜树组培苗移栽后成活率可达96%,但组培苗根系根毛系统发育较差.组培苗单位叶面积根尖数量显著低于对照实生苗,而且此参数与叶片气孔导度呈显著正相关.这种较差根系发育导致叶片气孔导度过低可能是组培苗叶片光合能力较低的重要原因.