The Tenebrionidae of California: A Time Sensitive Snapshot Assessment

Due to a diversity of habitats and its geologic history, the US state of California hosts a spectacular assemblage of darkling beetle species (Coleoptera: Tenebrionidae). In addition to being part of the California Floristic Province, one of 34 global biodiversity hotspots identified by Conservation International, California also has additional areas which are parts of the Great Basin, Mojave, and Sonoran deserts. California is divided into nine floristic regions. Each region is assessed in terms of faunal composition and endemism. A “snapshot” of our present knowledge of the Tenebrionidae indicates that 447 currently recognized species, representing 108 genera, occur in California of which one hundred and ninety are endemic. California is compared to other nearby regions in diversity and endemism. An analysis of currently valid species vs a more realistic species account based on unpublished records of likely synonyms and known species yet to be described in the scientific literature is presented. The California Floristic Region, rather than other more arid parts of California, has the highest number of total and endemic species. Because of their high diversity and endemism, tenebrionids could potentially provide a valuable tool for monitoring the environment for conservation purposes.     

Hotspots and ecoregions: a test of conservation priorities using taxonomic data

The loss of biodiversity is now recognized as a global problem of significant magnitude [ Science 289: 2279]. Conservation efforts focus on measuring species diversity and distribution, assessing biodiversity threats, and managing habitats to maintain that diversity. The accuracy of measuring species diversity depends on the quality and scale of the data. Recently indirect estimates of diversity based on the skilled opinions of international taxonomic authorities were used to define 25 global conservation hotspots [ Nature 403: 853–858] and 871 ecoregions [ Bioscience 51: 933–938]. These data, originating from first-hand fieldwork and museum study, are readily available, but not necessarily repeatable nor testable. If this type of information prevails for conservation purposes, it is critical that we test the quality of this information with verifiable data at finer scales (e.g., regional inventories, specimen records, and accumulated distribution data). Here we perform such a test for the hotspots and ecoregions found in the Indo-Pacific by comparing the estimates of the expert scientists with authenticated published diversity data on flowering plants. We found a high correlation between our counts of species richness and endemism with the experts' estimates, but surprisingly found less congruity among the seven families examined. A revised list of conservation priority regions based on our plant data is provided.     

Diversity of mammals in the tropical–temperate Neotropics: hotspots on a regional scale

The tropical–temperate interface of the southern Neotropics harbours an interdigitating array of biomes (Puna, Monte, Chaco, Yungas). This topographic and climatically complex region needs urgent conservation efforts, as it is being transformed by human activities at an accelerating pace. We analyse georeferenced field records of mammal species in northwestern Argentina (provinces: Catamarca, Jujuy, Salta, Tucuman) in order to define biodiversity hotspots on the basis of 0.5°× 0.5° grid cells within northwestern Argentina according to total richness of mammal species, richness of megaspecies (species above 10 kg), and endemic species (species restricted to Argentina or neighbouring countries with shared biomes). The mammal fauna of northwestern Argentina is fairly well known (176 species). The biomes differ considerably in species richness (Puna low, Yungas high) and species composition. We found no significant difference between endemic and non-endemic species regarding cell occupancy or body size. Cell occupancy was not correlated to body size. Across grids, species richness, number of megaspecies as well as richness of endemics are all correlated to sampling effort. More than 50% of the species in the region are restricted to one or two biomes. Overall, the species turn-over between biomes in northwestern Argentina is high. Using a simple algorithm we identified 10 grid cells which covered 90% of the total number of recorded species, and contrast them with the protected areas. While the Puna and Yungas biomes are rather well protected, the arid and semiarid Monte and Chaco are in need of urgent attention in biodiversity conservation.     

Bromeliaceae diversity and conservation in Minas Gerais state,Brazil

Field work and data from herbaria collections (2686 records) representing 283 taxa (265 species and 18 infraspecific taxa) of Bromeliaceae occurring at Minas Gerais state, southeastern Brazil, were analyzed in order to obtain distribution and diversity information, and to determine IUCN (The World Conservation Union) conservation status for each taxon. A map containing 1° × 1° grid cells was used to identify priority areas for new research collections, areas of high species diversity, and Bromeliaceae conservation status. A clear decrease in Bromeliaceae diversity is observed between the eastern and the western portions of Minas Gerais, and low floristic similarities were found between neighboring grid cells. The rocky mountains of Cadeia do Espinhaço are considered the most important area for Bromeliaceae endemics. From the 283 taxa of Bromeliaceae that occur at Minas Gerais, 118 (42%) are considered threatened, and 124 taxa (44% of the total) do not occur inside any protected area. The region of the Quadrilátero Ferrífero in the southern portion of the Cadeia do Espinhaço is the most threatened, and urgent strategies for conservation of this rich Bromeliaceae flora are needed. Northeastern Minas Gerais, particularly the rocky outcrops or inselbergs located in the Jequitinhonha and Mucuri rivers drainage basins need additional collection efforts and conservation actions focused on these saxicolous taxa.     

Implications of collection patterns of botanical specimens on their usefulness for conservation planning: an example of two neotropical plant families (Moraceae and Myristicaceae) in Peru

We evaluated the usefulness of herbarium collection databases for assessing patterns of species diversity and distribution based on a dataset from the flowering plant families Moraceae and Myristicaceae from the Peruvian Amazon. For Moraceae, a total of 3523 collections were used representing 134 species. The Myristicaceae were represented by 2113 collections of 46 species. We evaluated the distribution of collections based on 252 grid cells (0.5° size) covering all lowland rainforest in the Peruvian Amazon. We found that collections were concentrated in a few cells and that species diversity clearly increases in relation to collection density. Moraceae were collected in only 45% and Myristicaceae in only 31% of the 252 grid cells. Fifty percent of the collections came from just six and three cells, respectively. Most species were represented by only a small number of collections and collected only in a few grid cells, meaning a few widespread common species tend to dominate the collection records. Not surprisingly, most collections were made close to towns and transport routes. We evaluated the usefulness of rarefaction curves and diversity estimators for comparing diversity between regions. These techniques seem to be of little use for botanical collections due to violations of underlying assumptions. Problems such as accuracy of geographic and taxonomic data and strong bias in the spatial representation of the whole dataset are important to consider when basing conservation analysis, planning, and decision-making on seemingly large databases of biodiversity collections and are discussed in detail.     

Endemism and conservation of Amazon palms

Endemicity is important for the delimitation of conservation areas. Endemic areas are those that contain two or more taxa with their distribution restricted to the area. The aim of this study was to detect endemic areas for palms in the Amazon region and to determine whether the species that define these endemic areas are protected within conservation units. Records of occurrence were extracted from the global biodiversity information facility (GBIF). The final dataset consisted of 17,310 records, for 177 species of Amazonian palms. For analysis we used parsimony analysis of endemicity (PAE) and NDM-VNDM program, and grid square size of 1° and 3° as operational geographic units (OGUs). The distribution of endemic species was superimposed on occurrence of the conservation units (CUs). PAE did not show endemic areas in grid squares of 1°, but found 10 palm endemic areas in grid squares of 3° in the western Amazon and Andean sub-region. However, the NDM-VNDM program identified an endemic area in grid squares of 1° located at the eastern Guiana with endemicity score = 2.9, and in grid squares of 3° it identified seven consensus areas with endemicity score > 6.0, all in the western Amazon. The combination of PAE and NDM-VNDM analyses resulted in eight endemic palm areas in the combined western Amazon and Andean sub-region. Of the species that define the endemic areas, five are threatened with extinction in one of three IUCN categories (EN, VU, NT), and they are not protected in any conservation units. The western Amazon, besides having high palm richness, also has palm endemic areas, especially, near the Andean sub-region and the Peruvian Amazon.     

Recovery of conservation values in Central African rain forest after logging and shifting cultivation

Secondary forests in Central Africa are increasing in importance for biodiversity conservation as old growth forests outside the few protected areas are disappearing rapidly. We examined vegetation recovery in a lowland rain forest area in Cameroon based on a detailed botanical survey of old growth forest and different-aged logging gaps (5–27 years) and shifting cultivation fields (10–60 years). Our analysis focuses on the long-term recovery of botanical conservation values by analysing trends in vegetation structure, species composition, species diversity and levels of endemism and rarity. In the total survey (4.25 ha), we recorded 834 species of which 23% were endemic to the Lower Guinea forest region. The proportion of endemic species was high in shrubs and low in herbs. Geographic range and (local) rarity were not significantly associated. The proportion of rare species (relative frequency <10%) was high in woody climbers and low in trees. In logging gaps, recovery of all vegetation characteristics was relatively quick (5–14 years). Recovery in shifting cultivation sites took longer (30–60 years). Endemic species were found to be highly sensitive to shifting cultivation practices and even after 50–60 years the level of endemism was still significantly lower compared to old growth forest. The proportion of rare species was not significantly different between disturbed sites and old growth forest. We conclude that secondary forests can contribute to biodiversity conservation, e.g. as buffer zones around protected areas. However, this contribution should be assessed differently between land use types and widespread versus endemic species.     

Biodiversity Hotspots and Conservation Priorities in the Campo-Ma’an Rain Forests,Cameroon

Until recently, patterns of species richness and endemism were based on an intuitive interpretation of distribution maps with very limited numerical analyses. Such maps based solely on taxonomic collections tend to concentrate on collecting efforts more than biodiversity hotspots, since often the highest diversity is found in well-collected areas. During the last decades, there has been an overwhelming concern about the loss of tropical forest biological diversity, and an emphasis on the identification of biodiversity hotspots in an attempt to optimise conservation strategies. Furthermore, the concept of sites of high diversity, or hotspots, has attracted the attention of conservationists as a tool for conservation priority settings. With the development of GIS tools, geostatistics, phytosociological and multivariate analysis software packages, more rigorous numerical analyses of distributional and inventory data can be used for assessing conservation priorities. In the Campo-Ma’an rain forest, inventory data from 147 plots of 0.1 ha each and 7137 taxonomic collections were used to examine the distribution and convergence patterns of strict and narrow endemic species. We analysed the trends in endemic and rare species recorded, using quantitative conservation indices such as Genetic Heat Index (GHI) and Pioneer Index (PI), together with geostatistic techniques that help to evaluate and identify potential areas of high conservation priority. The results showed that the Campo-Ma’an area is characterised by a rich and diverse flora with 114 endemic plant species, of which 29 are restricted to the area, 29 also occur in southwestern Cameroon, and 56 others that are also found in other parts of Cameroon. Although most of the forest types rich in strict and narrow endemic species occur in the National Park, there are other biodiversity hotspots in the coastal zone and in areas such as Mont d’Eléphant and Massif des Mamelles that are located outside the National Park. Unfortunately, these areas, supporting 17 strict endemic species that are not found in the park, are under serious threat and do not have any conservation status for the moment. Taking into consideration that with the growing human population density, pressure on these hotspots will increase in the near future, it is suggested that priority be given to the conservation of these areas and that a separate management strategy be developed to ensure their protection.     

Diversity, spatial arrangement, and endemism of Cactaceae in the Huizache area, a hot-spot in the Chihuahuan Desert

We studied several aspects of the cactus diversity in the Huizache, an area located in the southern extreme of the Chihuahuan Desert Region, in San Luis Potosí, Mexico. Fieldwork was conducted in a square-shaped polygon (22°30–23°00 N, 100°00–100°30 W), where a total of 80 systematically-chosen localities were sampled for cactus species. Results showed that the Huizache is an important focal point for the conservation of the Cactaceae, due to the remarkably high diversity of members of this plant family in the area. With 75 species recorded, this area has the highest concentration of cactus species in the American Continent, in comparison with other comparably-sized regions. The outstanding diversity of cactus species in the Huizache area may be explained by the relatively favorable climate of this desert area, its environmental heterogeneity, and its location in a transitional position between three regions with distinct cactus floras: Chihuahuan Desert Region, Queretaroan-Hidalgoan Arid Zone, and Tula-Jaumave Valleys. Species richness is not distributed evenly in the area; the zones of highest species concentration are primarily located in the lowland valleys, in the northwestern portion of the grid square, where typical Chihuahuan Desert conditions prevail. Of the 75 cactus species found in the area, 63% are endemic to the Chihuahuan Desert. Among these, ten species are outstanding for being endemic or nearly endemic to the Huizache area. The Huizache grid square is part of a recently declared natural reserve, The Real de Guadalcázar Natural Reserve.     

Low Primate Diversity and Abundance in Northern Amazonia and its Implications for Conservation

Large areas of the Rio Negro basin in Amazonia are covered by continuous tracts of tropical forest, but have few primate species. This is anomalous considering the general relationship between area and number of species. One possibility is that much of the forest is unsuitable habitat for most primates and the area of suitable habitat is much less than the forested area. This has important consequences for the design of reserves and predictions of the consequences of climate change, which tend to be based on broad categories based on satellite images, and not on information of species distributions within those broad categories. The study was conducted through diurnal and nocturnal line‐transect surveys in the Biodiversity Research Program 25‐km² permanent grid in Viruá National Park, which has vegetation associations typical of much of northern Amazonia. The highest primate diversity and abundances occurred in tall terra firme forests (58%), whereas inundated forests and scrublands, which cover 42 percent of the survey grid and 90.8 percent of the Viruá National Park, have virtually no primates. This suggests that parks and reserves in northwestern Amazonia will have to be very large to maintain viable populations of most primates and their ecological interactions, and that very broad habitat categories are not sufficient to make predictions about actual and future suitability of areas for primate conservation.     

Evidence for longitudinal migration by a “sedentary” Brazilian flycatcher,the Ash‐throated Casiornis

The digitalization of museum collections and concurrent increase in citizen‐science initiatives is ushering in an era of unprecedented availability of primary biodiversity data. These changes permit a reappraisal of phenological patterns of tropical species. I examined spatio‐temporal variation in the distribution patterns of an ostensibly sedentary endemic Brazilian flycatcher, the Ash‐throated Casiornis (Casiornis fuscus), using both specimen data from museums and sighting records and rich media data from citizen‐science initiatives. I found compelling evidence for partial intratropical longitudinal migration to Amazonia and the Cerrado biomes from the species’ core range in the semi‐desert Caatinga biome and adjacent ecotones. These records from outside of the Caatinga were distributed during the height of the dry season from April to October, although the Caatinga is not entirely vacated at this time. This pattern of partial migration leads to a doubling of the distributional range of Ash‐throated Casiornises and strongly suggests that the species is a breeding near‐endemic of the Caatinga biome. This pattern was potentially previously not apparent because of significant biases in specimen collection between biomes, giving a false sense of abundance in the Brazilian Amazon.     

Atlas of Iberian water beetles (ESACIB database)

The ESACIB (‘EScarabajos ACuáticos IBéricos’) database is provided, including all available distributional data of Iberian and Balearic water beetles from the literature up to 2013, as well as from museum and private collections, PhD theses, and other unpublished sources. The database contains 62,015 records with associated geographic data (10×10 km UTM squares) for 488 species and subspecies of water beetles, 120 of them endemic to the Iberian Peninsula and eight to the Balearic Islands. This database was used for the elaboration of the “Atlas de los Coleópteros Acuáticos de España Peninsular”. In this dataset data of 15 additional species has been added: 11 that occur in the Balearic Islands or mainland Portugal but not in peninsular Spain and an other four with mainly terrestrial habits within the genus Helophorus (for taxonomic coherence). The complete dataset is provided in Darwin Core Archive format.     

The Effects of Governmental Protected Areas and Social Initiatives for Land Protection on the Conservation of Mexican Amphibians

Traditionally, biodiversity conservation gap analyses have been focused on governmental protected areas (PAs). However, an increasing number of social initiatives in conservation (SICs) are promoting a new perspective for analysis. SICs include all of the efforts that society implements to conserve biodiversity, such as land protection, from private reserves to community zoning plans some of which have generated community-protected areas. This is the first attempt to analyze the status of conservation in Latin America when some of these social initiatives are included. The analyses were focused on amphibians because they are one of the most threatened groups worldwide. Mexico is not an exception, where more than 60% of its amphibians are endemic. We used a niche model approach to map the potential and real geographical distribution (extracting the transformed areas) of the endemic amphibians. Based on remnant distribution, all the species have suffered some degree of loss, but 36 species have lost more than 50% of their potential distribution. For 50 micro-endemic species we could not model their potential distribution range due to the small number of records per species, therefore the analyses were performed using these records directly. We then evaluated the efficiency of the existing set of governmental protected areas and established the contribution of social initiatives (private and community) for land protection for amphibian conservation. We found that most of the species have some proportion of their potential ecological niche distribution protected, but 20% are not protected at all within governmental PAs. 73% of endemic and 26% of micro-endemic amphibians are represented within SICs. However, 30 micro-endemic species are not represented within either governmental PAs or SICs. This study shows how the role of land conservation through social initiatives is therefore becoming a crucial element for an important number of species not protected by governmental PAs.     

Influence of scale on conservation priority setting – a test on African mammals

Broad-scale priority regions for conservation can be identified usingdatabases on species distribution through the application of site-selectionalgorithms. However, the influence of scale on large-scale priority setting isstill unclear. Using a data set of all 939 sub-Saharan mammal species,we wanted to know if continental conservation priorities derived at the scales of 1°, 2°,4° and 8° latitude–longitude grid cells are consistent. We testedwhether (1) geographical location of minimum sets were nested across scale, (2)the selection sequence (priority) of areas within a minimum set were scaledependent, and (3) these coarse-scale priorities can act as a cost-effectiveshortcut for the identification of fine-scale priorities. We found that minimumsets at smaller scales were largely represented within minimum sets at largerscales, especially when flexibility was considered. However, the geographicallocation of the grid cells with highest priority in the minimum sets was onlyscale independent if ranked by number of endangered species, total speciesrichness or rare quartile species richness, but surprisingly not bycomplementary species richness. Minimum sets at a 1° scale were generallyidentified within the areas of the 2°, 4° and 8° minimum sets.Therefore, coarse-scale priorities may provide a pragmatic basis for immediateassessment of priorities for conservation.     

Checklist of the ants (Hymenoptera,Formicidae) of the Solomon Islands and a new survey of Makira Island

The intent of this paper is to facilitate future research of the Solomon Islands ant fauna by providing the first comprehensively researched species inventory in over 75 years. The species list presented here includes the names of all ant species recorded from the islands that are available in the literature together with specimen records from several museum collections and new records from our 2008 Makira field expedition. All the names of described species presented are valid in accordance with the most recent Formicidae classification. In total, the checklist is composed of 237 species and subspecies (including 30 morphospecies) in 59 genera representing nine subfamilies. We report that the recent field expedition added 67 new species records to Makira and 28 new species records to the Solomon Islands. Our research recovered species occurrence records for 32 individual islands and five island groups. The five islands with the highest number of recorded species are: Makira (142 spp.), Guadalcanal (107 spp.), Malaita (70 spp.), Santa Isabel (68 spp.), and Rennell (66 spp.). Based on our results, we discuss the taxonomic composition of the archipelago’s ant fauna, which islands are most in need of additional sampling, and the importance of establishing biodiversity baselines before environmental threats such as the invasive ant Wasmannia auropunctata cause irrevocable harm to the native biodiversity.     

Endemic birds of the Atlantic Forest: traits,conservation status,and patterns of biodiversity

The bird fauna of the Brazilian Atlantic Forest is exceptionally diverse and threatened, with high levels of endemism. Available lists of the endemic birds of the Atlantic Forest were generated before recent taxonomic revisions lumped or split species and before the recent increase in species occurrence records. Our objective, therefore, was to compile a new list of the endemic birds of the Atlantic Forest, characterize these species in terms of conservation status and natural history traits, and map remaining vegetation and protected areas. We combined GIS analysis with a literature search to compile a list of endemic species and, based on the phylogeny and distribution of these species, characterized areas in terms of species richness, phylogenetic diversity, and endemism. We identified 223 species of birds endemic to the Atlantic Forest, including 12 species not included in previous lists. In addition, 14 species included in previous lists were not considered endemic, either because they occur outside the Atlantic Forest biome or because they are not considered valid species. The typical Atlantic Forest endemic bird is a small forest‐dependent invertivore. Of the species on our list, 31% are considered threatened or extinct. Only ~ 34% of the spatial analysis units had > 10% forest cover, and protected area coverage was consistently low (< 1%). In addition, we found spatial incongruity among the different measures of biodiversity (species richness, relative phylogenetic diversity, restricted‐range species, and irreplaceability). Each of these measures provides information concerning different aspects of biological diversity. However, regardless of which aspect(s) of biodiversity might be considered most important, preservation of the remaining areas of remnant vegetation and further expansion of protected areas are essential if we are to conserve the many endemic species of birds in the Atlantic Forest.     

Gap analyses of priority wild relatives of food crop in current ex situ and in situ conservation in Indonesia

Conservation programmes are always limited by available resources. Careful planning is therefore required to increase the efficiency of conservation and gap analysis can be used for this purpose. This method was used to assess the representativeness of current ex situ and in situ conservation actions of 234 priority crop wild relatives (CWR) in Indonesia. This analysis also included species distribution modelling, the creation of an ecogeographical land characterization map, and a complementarity analysis to identify priorities area for in situ conservation and for further collecting of ex situ conservation programmes. The results show that both current ex situ and in situ conservation actions are insufficient. Sixty-six percent of priority CWRs have no recorded ex situ collections. Eighty CWRs with ex situ collections are still under-represented in the national genebanks and 65 CWRs have no presence records within the existing protected area network although 60 are predicted to exist in several protected areas according to their potential distribution models. The complementarity analysis shows that a minimum of 61 complementary grid areas (complementary based on grid cells) are required to conserve all priority taxa and 40 complementary protected areas (complementary based on existing protected areas) are required to conserve those with known populations within the existing in situ protected area network. The top ten of complementary protected areas are proposed as the initial areas for the development of CWR genetic reserves network in Indonesia. It is recommended to enhanced coordination between ex situ and in situ conservation stakeholders for sustaining the long term conservation of CWR in Indonesia. Implementation of the research recommendations will provide for the first time an effective conservation planning of Indonesia’s CWR diversity and will significantly enhance the country’s food and nutritional security.

     

Using Piper Species Diversity to Identify Conservation Priorities in the Chocó Region of Colombia

The forests of the Chocó Region are among the most diverse in the world, however they are under imminent threat of significant degradation. This study uses species diversity and phylogenetic data in the plant genus Piper to select areas of maximum biological diversity to be considered as conservation priorities. Species distributions were obtained from herbarium collections and the literature. A molecular phylogeny based on nucleotide sequence data from the ITS region of the nuclear genome was used to estimate phylogenetic diversity indices. Three diversity indices were estimated: total species richness, number of endemic species, and phylogenetic diversity. Area selection was conducted by maximizing the total value for these indices and also by complementarity. Four regions were selected as the highest conservation priorities: the vicinity of Buenaventura, the Rio San Juan watershed (south of Quibdó), the department of Nariño, and the Rio Atrato watershed. All of them had the highest rankings for all or some of the diversity indices evaluated. Furthermore, this study shows that in the Chocó Region, Piper phylogenetic diversity increases with total number of species, but decreases with the proportion of endemics.     

Diversity biases in terrestrial mammalian assemblages and quantifying the differences between museum collections and published accounts: A case study from the Miocene of Nevada

Understanding diversity through time in the fossil record has primarily relied on the raw count of species within a given time interval, or species richness. These estimates are often derived from published fossil data, and standardized for sample size or geographic area. However, most methods that standardize richness by sample size are sensitive to changes in evenness, which introduces a potential problem with relying on published records: published accounts could be more even than the museum collections from which they are drawn. We address this bias in the context of mammalian paleodiversity, comparing published and museum collections of the Hemphillian Thousand Creek fauna to those of the Barstovian Virgin Valley fauna. We rarified specimen data, both number of identified specimens (NISP) and minimum number of individuals (MNI), and presence/absence data to compare published and museum data within and between faunas. Within faunas, published numbers of specimens are more even than museum samples, but the difference for localities in Virgin Valley is not significant. Neither published nor museum numbers of specimens indicate a significant difference between faunas, but the diversity pattern is reversed between the two data sets. Presence/absence rarefactions show no differences between sources; here, published data adequately sample the underlying museum records. Specimen-based evenness is not accurate in the published sample, and therefore we suggest that future studies of diversity in terrestrial mammalian assemblages must assess unpublished collections. Additionally, NISP data for Thousand Creek are more even than MNI data, suggesting that relying solely on NISP for assessing species diversity can also be misleading. Because publication bias alters richness and evenness, diversity estimates using published data must be circumspect about data sources.