Diversity and ecology of algae from the Lower Jordan River,Israel

Abstract

The Lower Jordan River stretches from the outlet of Lake Kinneret till the Dead Sea and is one of the most polluted rivers in Israel. In order to estimate the aquatic ecosystem of the northern part of the Lower Jordan River we used algal communities as biological indicators in the rainy and dry seasons of 2005 and 2007. We found 152 species of algae and cyanoprokaryotes from seven taxonomic divisions, which were mostly dominated by diatoms accompanied by the greens, blue‐greens and euglenoids. The xanthophycean species Heterococcus viridis, a red freshwater alga Audouinella hermannii, and a cyanobacterium Microcrocis marina were found for the first time in Israel. In the ecological analysis we revealed groups of freshwater algae according to pH, salinity, and saprobity as well as temperature, streaming and oxygenation. Quantitative information on the relationship between species and environmental variables was obtained using CCA analysis, emphasizing the major seasonal parameters. The extent of association of species with the environmental variables vector allowed us to determine the bio‐sensors and bio‐indicators, which may be relevant for monitoring of pollutants in the Lower Jordan River. The combination of bio‐indicational methods and statistics were effective in the determination of the main factors influencing algal diversity, as well as in revealing the indicators or bio‐sensing species for the most important environmental variables.     

Passive restoration in Araucaria Forest: useful ecological indicators in monitoring successional advancement in exotic tree plantation landscapes

Monitoring successional advancement is a complex field involving a constant search for applied ecological indicators which facilitate monitoring of secondary forests for both active and passive restoration. In this study, the authors investigate the successional advancement of floristics and tree structure within Araucaria Forest (AF) fragments under passive restoration in a context where exotic tree plantations (mainly Pinus L. genus) dominate the landscape. The ecological indicators used were floristic dissimilarity (β‐diversity inferences), indicator species, ecological groups of species, basal area, and species abundance distribution (SAD) models (α‐diversity inferences). A total of 182 tree species belonging to 91 genera and 43 botanical families were identified. A high β diversity was verified for which each site has indicator species (for the locations CD—Dicksonia sellowiana; CO—Cryptocarya aschersoniana; and PG—Pinus taeda), where pioneer species contributed to much of the abundance. Different SAD models are useful for describing passive restoration sites in exotic tree plantation landscapes, namely Lognormal, Mandelbrot, and Zipf. SAD models together with basal area, taxonomic group (e.g. Myrtaceae assemblage), and tree abundance in ecological groups are strategic ecological indicators for monitoring successional advancement in AF.     

Last evidence of Lates (Perciformes,Latinae) in the latest Miocene of the Eastern Paratethys

An articulated series of centra from latest Miocene deposits of Ukraine is described and identified as a species of Lates. The specimen comes from a locality with an estimated age of 6.04–4.7 Ma, representing the northernmost reach of the Paratethys during the Pontian. The specimen almost certainly represents a distinct species, but because it is incomplete we do not formally name it. The specimen can be differentiated from other species of Lates by features of the centra, including the relative size of the primary lateral fossa of the second centrum, the broadened neural spine of the third centrum, and the relative position of the upper and primary lateral pits on both the fifth and sixth centra. The Ukrainian specimen documents the presence of Lates in the northern Paratethys in the latest Miocene. After this time, species of Lates persisted in freshwaters in the Mediterranean area (Israel and Africa), but are no longer found in the marine waters of the region. We suggest that latines were extirpated from the Mediterranean and Paratethys by the rapidity of the changes in salinity that occurred in the Tethys Mediterranean basin and Paratethys as a result of the Messinian Salinity Crisis.     

Seasonal variability of copepod abundance in the Balearic region (Western Mediterranean) as an indicator of basin scale hydrological changes

Spatial and temporal changes of the copepod community have been investigated and related to the environmental variability of the Balearic Sea (Western Mediterranean). The period studied spans from 1994 to 1999 during which we analyzed the abundance and structure copepod variability over a cross-shore transect. Results showed a close link between hydrological changes and the variations of copepod abundance. The synchronous variability of copepods and hydrography indicated the rapid response of this zooplankton group to the inflow of cold and warm water masses coming through the study area. Cluster analysis revealed four main copepod assemblages that distinguished the coastal from the oceanic species and those species with different water masses preference. The copepod assemblage composed of Calanus helgolandicus, Clausocalanus arcuicornis, C. pergens, C. paululus, Calocalanus tenuis and Pleuromamma gracilis was associated with cool salty waters, whereas the assemblage formed by Temora stylifera, C. pavo, C. styliremis, Centropages bradyi and Acartia danae was related to warmer less saline Mediterranean waters. Moreover, it is suggested that changes in sea water temperature and salinity are linked to large-scale changes likely occurring at a basin scale, which is reflected in the Western Mediterranean mesoscale hydrographic changes. Therefore, it is stressed that changes in the Balearic copepod community can be used as potential tracers of the western Mediterranean water masses. Guest editors: S. Souissi & G. A. Boxshall Copepoda in the Mediterranean: Papers from the 9th International Conference on Copepoda, Hammamet, Tunisia     

Desiccation resistance and mating behaviour in laboratory populations of Drosophila simulans originating from the opposing slopes of Lower Nahal Oren (Israel)

Lower Nahal Oren in Northern Israel, often referred to as 'Evolution Canyon', has been proposed as a microscale model site for ecological evolution. However, conflicting stress resistance and mating assay results contribute to controversy over the Nahal Oren model. In this study, we further tested the Nahal Oren model, while extending its focus from Drosophila melanogaster to its sister species, Drosophila simulans. Using fly populations derived from the opposing canyon slopes and acclimated to laboratory conditions for 11-22 generations, we did not find a significant slope effect on desiccation resistance (P = 0.96) or body metabolic fuel content (P > 0.43), which would indicate a genetic basis for adaptation to local resource limitation. Multiple-choice mating assays (47-48% homotypic couples in two replicate populations) did not indicate divergence from a random mating pattern between north- and south-facing slope flies. In conclusion, our findings do not support divergence of D. simulans populations across Lower Nahal Oren.     

Calcareous dinoflagellate cysts in surface sediments from the Mediterranean Sea: distribution patterns and influence of main environmental gradients

The distribution of calcareous dinoflagellate cysts in surface sediments from the Mediterranean Sea was quantitatively analysed. The samples contain 11 cyst species and the vegetative coccoid Thoracosphaera heimii. Cyst abundance increases towards the deeper parts of the basins and is generally higher in the eastern Mediterranean Sea. Three major distribution characteristics exist: (1) different assemblages in oceanic and neritic regions, (2) little agreement with the associations of areas studied so far like the Atlantic Ocean, and (3) a unique oceanic assemblage in the eastern Mediterranean Sea. A gradual change in cyst assemblages from the western to the eastern Mediterranean Sea was observed and statistically compared with the main environmental gradients in the upper water column. Temperature, nitrate concentration and possibly salinity appear to be the most important factors controlling cyst production. Three groups containing cysts with similar environmental preferences can be distinguished: (1) an eastern Mediterranean group related to relatively high temperature and salinity but low nitrate concentration, (2) a group of more or less consistently abundant cosmopolitan species tolerating or even preferring relatively low temperature and salinity but high nitrate concentration, and (3) a group containing species that are possibly adapted to neritic environments and have probably been transported from coastal areas into the studied regions. In contrast to other calcareous plankton, calcareous dinoflagellate cysts correlate strongly with the main environmental gradients in the Mediterranean Sea, bearing a high potential for palaeoenvironmental reconstructions.     

Distribution of recent planktonic foraminifera in surface sediments of the Mediterranean Sea

The Mediterranean Sea is a partillay isolated ocean where excess evaporation over precipitation results in large east to west gradients in temperature and salinity. Recent planktonic foraminiferal distributions have been examined in 66 surface sediment samples from the Mediterranean Sea. In addition to mapping the frequency distribution of 16 species, the faunal data has been subjected to cluster analysis, factor analysis and species diversity analysis. The clustering of species yields assemblages that are clearly temperature related. A warm assemblage contains both tropical and subtropical elements, while the cool assemblage can be subdivided into cool-subtropical, transitional and polar-subpolar groupings. Factor analysis is used to delineate the geographic distribution of four faunal assemblages. Factor 1 is a tropical-subtropical assemblage dominated by Globigerinoiden ruber. It has its highest values in the warmer eastern basin. Transitional species (Globorotalia inflata and Globigerina bulloides) dominate factor 2 with highest values occurring in the cooler western basin. Factor 3 reflects the distribution of Neogloboquadrina dutertrei and is considered to be salinity dependent. Subpolar species dominate factor 4 (Neoglobuquadrina pachyderma and G. bulloides), with highest values occurring in the northern part of the western basin where cold bottom water is presently being formed. The Shannon-Weiner index of species diversity shows that high diversity exists over much of the western basin and immediately east of the Strait of Sicily. This region is marked by equitable environmental conditions and relatively even distribution of individuals among the species. Conversely, in areas where temperature and salinity values are more extreme, diversity values are lower and the assemblages are dominated by one or two species.     

A new coral‐associated decapod assemblage from the Upper Miocene (Messinian) Upper Coralline Limestone of Malta (Central Mediterranean)

Abstract: A rich coral‐associated decapod assemblage is recorded from the ‘Depiru Beds’ of the upper part of the Upper Coralline Limestone (Messinian, Upper Miocene), from the island of Malta. Nineteen species within 17 genera have been discovered, where 14 genera are new for Malta. Four new species are described, namely Micippa annamariae sp. nov., Pilumnus scaber sp. nov., Panopeus muelleri sp. nov. and Herbstia melitense sp. nov. Herbstia melitense sp. nov. constitutes the first record of the genus from the fossil record in the Mediterranean region. This discovery more than doubles the number of known fossil decapod species from Malta. The fossil bivalve Jouannetia (J.) semicaudata Des Moulins, 1830 and the extant decapod Maja goltziana D’Oliveira, 1888, are also recorded for the first time from Malta. Other Neogene coral‐associated decapod assemblages are investigated and correlated with the new assemblage from Malta. The migration of taxa between the Mediterranean region and the Paratethys, particularly during the Lower Badenian (Langhian), is evidenced by the strong affinity of the Maltese decapod assemblage with that of the Middle Miocene Badenian assemblages from Hungary, Poland and Ukraine. Upper Miocene, Messinian assemblages from Spain, Algeria and Morocco are also similar to that from Malta.     

A Serravallian (Middle Miocene) shark fauna from Southeastern Spain and its palaeoenvironment significance

Abstract

The study of a new Serravallian (Middle Miocene) locality from the Southeastern Spain has yielded a shark assemblage characterized by microremains of at least seven taxa (Deania calcea, ?Isistius triangulus, ?Squaliolus cf. S. schaubi, ?Paraetmopterus sp., Pristiophorus sp., Scyliorhinus sp. and a cf. Squaliformes indet) of three different orders (Squaliformes, Pristiophoriformes and Carcharhiniformes). In addition, associated macroremains have also been found, including teeth of ?Cosmopolitodus hastalis, Isurus sp., Hemipristis serra, Odontaspis sp., Carcharhinus spp. and ?Otodus (Megaselachus) megalodon. The assemblage contains taxa with disparate environmental preferences including not only neritic and epipelagic sharks but also an important number of meso and bathypelagic representatives. The migration of deep water taxa to shallower waters through submarine canyons/coastal upwelling is proposed as the most plausible cause for explaining the origin of such assemblage. Interestingly, the composition of the deep-water taxa here reported contrast with the chondrichthyans assemblages from the Pliocene and extant Mediterranean communities. This entails a complex biogeographic history, where the Messinian salinity crisis strongly affected the posterior evolution of the Mediterranean ecosystems but some other factors, such us the existence of anoxic events during the Quaternary, could have also played an important role.     

Microclimatic Divergence in a Mediterranean Canyon Affects Richness,Composition, and Body Size in Saproxylic Beetle Assemblages

Large valleys with opposing slopes may act as a model system with which the effects of strong climatic gradients on biodiversity can be evaluated. The advantage of such comparisons is that the impact of a change of climate can be studied on the same species pool without the need to consider regional differences. The aim of this study was to compare the assemblage of saproxylic beetles on such opposing slopes at Lower Nahal Oren, Mt. Carmel, Israel (also known as “Evolution Canyon”) with a 200–800% higher solar radiation on the south-facing (SFS) compared to the north-facing slope (NFS). We tested specific hypotheses of species richness patterns, assemblage structure, and body size resulting from interslope differences in microclimate. Fifteen flight-interception traps per slope were distributed over three elevation levels ranging from 50 to 100 m a.s.l. Richness of saproxylic beetles was on average 34% higher on the SFS compared with the NFS, with no detected influence of elevation levels. Both assemblage structure and average body size were determined by slope aspect, with more small-bodied beetles found on the SFS. Both the increase in species richness and the higher prevalence of small species on the SFS reflect ecological rules present on larger spatial grain (species-energy hypothesis and community body size shift hypothesis), and both can be explained by the metabolic theory of ecology. This is encouraging for the complementary use of micro- and macroclimatic gradients to study impacts of climate warming on biodiversity.     

Macroecological analysis of the fish fauna inhabiting Cymodocea nodosa seagrass meadows

In this study, patterns in the taxonomic richness and composition of the fish fauna inhabiting Cymodocea nodosa seagrass meadows were described across their entire distribution range in the Mediterranean Sea and adjacent Atlantic Ocean. Specifically, the study tested whether there are differences in the composition of fish assemblages between those ecoregions encompassed by the distribution range of C. nodosa, and whether these differences in composition are connected with differences in bioclimatic affinities of the fish faunas. A literature review resulted in a total of 19 studies, containing 22 fish assemblages at 18 locations. The ichthyofauna associated with C. nodosa seagrass meadows comprises 59 families and 188 species. The western Mediterranean (WM) Sea has the highest species richness (87 species). Fish assemblages from the Macaronesia–Canary Islands, the Sahelian Upwelling, South European Atlantic Shelf and the WM differ, in terms of assemblage composition, relative to other ecoregions. In contrast, the composition of the fish fauna from the central and eastern Mediterranean overlaps. There is a significant serial correlation in fish assemblage composition between adjacent ecoregions along the distribution range of C. nodosa. Dissimilarities in assemblage composition are connected with the geographical separation between locations, and the mean minimum annual seawater temperature is the environmental factor that explains most variation in fish assemblage composition.     

Imprint of monsoonal patterns on the fish assemblage in coastal waters of south‐east India: a case study

The composition, species richness and diversity of a coastal fish assemblage from the Kalpakkam coast of south‐east India are described along with temporal distribution patterns related to seasonal fluctuations in dissolved oxygen, salinity, pH, chlorophyll‐a, phytoplankton and zooplankton species richness and density. A total of 244 fish species belonging to 21 orders, 87 families and 163 genera were recorded. The fish assemblage was dominated by reef‐associated species, followed by demersal species. The majority of the species (63%) are widely distributed in the western Indo‐Pacific as well as in the central Indo‐Pacific. Jaccard's coefficient analysis showed three distinct seasonal patterns of fish occurrence: pre‐monsoon (PrM), monsoon (M) and post‐monsoon (PoM). The maximum number of species was during the PrM period, followed by the PoM and M periods. Species occurrence analysis showed Sardinella longiceps to be dominant during PrM and M periods, Leiognathus dussumieri during the M period and Secutor insidiator and Secutor ruconius during the M and PoM periods. Canonical correspondence analysis indicated that salinity and rainfall were the two most influential environmental factors strongly correlated with temporal variation in the fish assemblage. The physico‐chemical conditions, in combination with factors such as greater food availability and shelter, might control the seasonal local distribution of the ichthyofauna in these Indian coastal waters.     

Genomic signatures of rapid adaptive evolution in the bluespotted cornetfish,a Mediterranean Lessepsian invader

Biological invasions are increasingly creating ecological and economical problems both on land and in aquatic environments. For over a century, the Mediterranean Sea has steadily been invaded by Indian Ocean/Red Sea species (called Lessepsian invaders) via the Suez Canal, with a current estimate of ~450 species. The bluespotted cornetfish, Fistularia commersonii, considered a ‘Lessepsian sprinter’, entered the Mediterranean in 2000 and by 2007 had spread through the entire basin from Israel to Spain. The situation is unique and interesting both because of its unprecedented rapidity and by the fact that it took this species c. 130 years to immigrate into the Mediterranean. Using genome scans, with restriction site‐associated DNA (RAD) sequencing, we evaluated neutral and selected genomic regions for Mediterranean vs. Red Sea cornetfish individuals. We found that few fixed neutral changes were detectable among populations. However, almost half of the genes associated with the 47 outlier loci (potentially under selection) were related to disease resistance and osmoregulation. Due to the short time elapsed from the beginning of the invasion to our sampling, we interpret these changes as signatures of rapid adaptation that may be explained by several mechanisms including preadaptation and strong local selection. Such genomic regions are therefore good candidates to further study their role in invasion success.     

New data and new species of Microcoryphia and Zygentoma (Insecta) from Israel

The presented contribution concerns the study of several samples of Microcoryphia and of Zygentoma obtained in Israel; an up to date of the species of these insect Orders reported from Palestine is also presented. Genus Hyperlepisma (Lepismatidae: Ctenolepismatinae) is reported for the first time from the country and one new species H. palaestinensis n. sp., is described from the northern Negev. Another new species this one of the genus Lepidospora s. s. (Nicoletiidae: Coletiniinae), L. (L.) ayyalonica n. sp., is described from the Ayyalon Cave in Western Central Israel, from where several other terrestrial and aquatic endemic arthropods were already known.     

Molecular Evidence for Lessepsian Invasion of Soritids (Larger Symbiont Bearing Benthic Foraminifera)

The Mediterranean Sea is considered as one of the hotspots of marine bioinvasions, largely due to the influx of tropical species migrating through the Suez Canal, so-called Lessepsian migrants. Several cases of Lessepsian migration have been documented recently, however, little is known about the ecological characteristics of the migrating species and their aptitude to colonize the new areas. This study focused on Red Sea soritids, larger symbiont-bearing benthic foraminifera (LBF) that are indicative of tropical and subtropical environments and were recently found in the Israeli coast of the Eastern Mediterranean. We combined molecular phylogenetic analyses of soritids and their algal symbionts as well as network analysis of Sorites orbiculus Forskål to compare populations from the Gulf of Elat (northern Red Sea) and from a known hotspot in Shikmona (northern Israel) that consists of a single population of S. orbiculus. Our phylogenetic analyses show that all specimens found in Shikmona are genetically identical to a population of S. orbiculus living on a similar shallow water pebbles habitat in the Gulf of Elat. Our analyses also show that the symbionts found in Shikmona and Elat soritids belong to the Symbiodinium clade F5, which is common in the Red Sea and also present in the Indian Ocean and Caribbean Sea. Our study therefore provides the first genetic and ecological evidences that indicate that modern population of soritids found on the Mediterranean coast of Israel is probably Lessepsian, and is less likely the descendant of a native ancient Mediterranean species.     

Similarity between contemporary vegetation and plant remains in the surface sediment in Mediterranean lakes

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Adding ecology into phylogeography: ecological niche models and phylogeography in tandem reveals the demographic history of the subalpine warbler complex

Capsule: This study documents evidence of interglacial refugia during the Last Interglacial for birds in the Mediterranean region, and emphasizes the importance of the Last Interglacial on the geographic distribution and genetic structure of Mediterranean species.

Aims: We focused on the historical biogeography of the subalpine warbler complex: Subalpine Warbler Sylvia cantillans and Moltoni’s Warbler Sylvia subalpina; we tested if this Mediterranean bird complex shared a similar demographic fate as the present-day widespread species in the temperate zones of Europe, through the late Quaternary glacial-interglacial cycles.

Methods: An ecological niche model was developed to predict the geographic distribution of the subalpine warblers under the past (the Last Interglacial and the Last Glacial Maximum) and the present bioclimatic conditions. Additionally, Bayesian Skyline Plot analysis was used to assess effective population size changes over the history of the subalpine warbler complex.

Results: During the Last Glacial Maximum, the subalpine warblers almost reached their current distribution in the Mediterranean region; yet, unlike the widespread temperate bird species, they survived the Last Interglacial in allopatric refugia in the Mediterranean region.

Conclusion: A unique biogeographic pattern was revealed, indicating the importance of the Last Interglacial on current distributional patterns and demographic histories of common bird species in the Mediterranean region. This study suggests that Mediterranean biogeography is far more complex than previously assumed, and so deserves further study and more attention.     

Species diversity and microsite divergence of insects at “Evolution Canyon”, Lower Nahal Oren,Mt. Carmel,Israel (Coleoptera: Buprestidae)

Abstract

Local differences in species richness and abundance of buprestid beetles were studied at the microsite “Evolution Canyon”, Lower Nahal Oren, Mt. Carmel, Israel, a model conceived for studying biodiversity evolution in a microcosm of life in nature. 39 species were collected at the microsite, and species richness was higher on the more arid and microclimatically stressful and variable south-facing slope than on the milder, more humid and relatively homogeneous north-facing slope. The interslope differences in abundance were significant in five species. New larval host plants were added for nine species, as well as new data about the regional distribution of buprestid beetles. The results support earlier conclusions in various groups of organisms across phylogeny.     

The rise and fall of an alien: why the successful colonizer Littorina saxatilis failed to invade the Mediterranean Sea

Understanding what determines range expansion or extinction is crucial to predict the success of biological invaders. We tackled this long-standing question from an unparalleled perspective using the failed expansions in Littorina saxatilis and investigated its present and past habitat suitability in Europe through Ecological Niche Modelling. This intertidal snail is a typically successful Atlantic colonizer and the earliest confirmed alien species in the Mediterranean Sea, where, however, it failed to thrive despite its high dispersal ability and adaptability. We explored the environmental constraints affecting its biogeography, identified potential glacial refugia in Europe that fuelled its post-glacial colonisations and tested whether the current gaps in its distribution are linked to local ecological features. Our results suggested that L. saxatilis is unlikely to be a glacial relict in the Mediterranean basin. Multiple Atlantic glacial refugia occurred in the Last Glacial Maximum, and abiotic environmental features such as salinity and water temperature have influenced the past and current distributions of this snail and limited its invasion of the Mediterranean Sea. The snail showed a significant overlap in geographic space and ecological niche with Carcinus maenas, the Atlantic predator, but distinct from Pachygrapsus marmoratus, the Mediterranean predator, further pointing to Atlantic-like habitat requirements for this species. Abiotic constrains during introduction rather than dispersal abilities have shaped the past and current range of L. saxatilis and help explaining why some invasions have not been successful. Our findings contribute to clarifying the processes constraining or facilitating shifts in species’ distributions and biological invasions.

     

Molecular Phylogeny and Ecology of Textularia agglutinans d’Orbigny from the Mediterranean Coast of Israel: A Case of a Successful New Incumbent

Textularia agglutinans d’Orbigny is a non-symbiont bearing and comparatively large benthic foraminiferal species with a widespread distribution across all oceans. In recent years, its populations have considerably expanded along the Israeli Mediterranean coast of the eastern Levantine basin. Despite its exceptionally widespread occurrence, no molecular data have yet been obtained. This study provides the first ribosomal DNA sequences of T. agglutinans complemented with morphological and ecological characterization, which are based on material collected during environmental monitoring of the hard bottom habitats along the Israeli Mediterranean coast, and from the Gulf of Elat (northern Red Sea). Our phylogenetic analyses reveal that all specimens from both provinces belong to the same genetic population, regardless their morphological variability. These results indicate that modern population of T. agglutinans found on the Mediterranean coast of Israel is probably Lessepsian. Our study also reveals that T. agglutinans has an epiphytic life mode, which probably enabled its successful colonization of the hard bottom habitats, at the Mediterranean coast of Israel, which consist of a diverse community of macroalgae. Our study further indicates that the species does not tolerate high SST (> 35°C), which will probably prevent its future expansion in the easternmost Mediterranean in light of the expected rise in temperatures.